|
A newer version of this gene model can be found here:
Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
---|---|---|---|---|---|
AT5G43600 | AT | Annotation by Michelle Graham. TAIR10: ureidoglycolate amidohydrolase | chr5:17512651-17515280 FORWARD LENGTH=476 | SoyBase | E_val: 1.00E-71 | ISS |
GO:0000256 | GO-bp | Annotation by Michelle Graham. GO Biological Process: allantoin catabolic process | SoyBase | N/A | ISS |
GO:0000394 | GO-bp | Annotation by Michelle Graham. GO Biological Process: RNA splicing, via endonucleolytic cleavage and ligation | SoyBase | N/A | ISS |
GO:0006508 | GO-bp | Annotation by Michelle Graham. GO Biological Process: proteolysis | SoyBase | N/A | ISS |
GO:0008152 | GO-bp | Annotation by Michelle Graham. GO Biological Process: metabolic process | SoyBase | N/A | ISS |
GO:0009086 | GO-bp | Annotation by Michelle Graham. GO Biological Process: methionine biosynthetic process | SoyBase | N/A | ISS |
GO:0005739 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: mitochondrion | SoyBase | N/A | ISS |
GO:0004848 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: ureidoglycolate hydrolase activity | SoyBase | N/A | ISS |
GO:0008237 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: metallopeptidase activity | SoyBase | N/A | ISS |
GO:0016787 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: hydrolase activity | SoyBase | N/A | ISS |
GO:0016813 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines | SoyBase | N/A | ISS |
PTHR11014 | Panther | PROTEASE M20-RELATED | JGI | ISS | |
PTHR11014:SF27 | Panther | SUBFAMILY NOT NAMED | JGI | ISS | |
PF01546 | PFAM | Peptidase family M20/M25/M40 | JGI | ISS | |
UniRef100_G7I3Z0 | UniRef | Annotation by Michelle Graham. Most informative UniRef hit: N-carbamoyl-L-amino acid hydrolase n=1 Tax=Medicago truncatula RepID=G7I3Z0_MEDTR | SoyBase | E_val: 2.00E-91 | ISS |
UniRef100_I1LC96 | UniRef | Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=2 Tax=Glycine max RepID=I1LC96_SOYBN | SoyBase | E_val: 1.00E-102 | ISS |
Glyma14g27625 not represented in the dataset |
Glyma14g27625 not represented in the dataset |
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
Corresponding Name | Annotation Version | Evidence | Comments |
---|---|---|---|
Glyma.14g120400 | Wm82.a2.v1 | IGC | As supplied by JGI |
Schmutz et al. 2010 Genome sequence of the palaeopolyploid soybean Nature 2010, 463:178-183 |
>Glyma14g27625.1 sequence type=CDS gene model=Glyma14g27625 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high ATGATTAAGTTTACTTTAGATATCATTTGGAGTAGAAATCATGTTGGTTTGGCTCCTTCTGAATTAGCCCTGGCTATAGAGAGGCATGTGTTGGATTGTGGTTCAATTGATAATGTTGGCACTGCCGGTATCTTGGAACTGCATCTTGGAGCAATCAACAACATCCCCAACAAATGTCACCTAGAAATTGACACAAGAGACATTGATGAGGAAAGAAGAAATAAAGTGGTTGACAAAATTCATCAATCAGCAATTAAAATAACCAAAACACGAGGTGTCAAGTTCTCTCATTTCCGTGTCATCAATCAGGATCCACTATCCCTTTCTAATGAAGCAGTCATGAAGGCAGTAGAGACTGCAACAAAAGAACTAAACTTGACAAGCAAGTTGATGATTAGTAGAGCCTATCATGATTCATTGCTTATGGCCAGGTTGTCTCCAATGGGCATGATTTTCATTCCATGGTACAAAGGGTACAACCATAAGCCTAAAGAGTTTGCCACCATTGAAGATATGTCAAATGGTGTAAACGTATCGGCGCTCACCCTAGCCAAATTGTCCAGTCAATAA
>Glyma14g27625.1 sequence type=predicted peptide gene model=Glyma14g27625 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high MIKFTLDIIWSRNHVGLAPSELALAIERHVLDCGSIDNVGTAGILELHLGAINNIPNKCHLEIDTRDIDEERRNKVVDKIHQSAIKITKTRGVKFSHFRVINQDPLSLSNEAVMKAVETATKELNLTSKLMISRAYHDSLLMARLSPMGMIFIPWYKGYNHKPKEFATIEDMSNGVNVSALTLAKLSSQ*
Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA | ||