Report for Sequence Feature Glyma14g27380
Feature Type: gene_model
Chromosome: Gm14
Start: 33570749
stop: 33582544
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma14g27380
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT1G43850 AT
Annotation by Michelle Graham. TAIR10: SEUSS transcriptional co-regulator | chr1:16617872-16621596 FORWARD LENGTH=877
SoyBase E_val: 0 ISS
GO:0007275 GO-bp
Annotation by Michelle Graham. GO Biological Process: multicellular organismal development
SoyBase N/A ISS
GO:0009790 GO-bp
Annotation by Michelle Graham. GO Biological Process: embryo development
SoyBase N/A ISS
GO:0009909 GO-bp
Annotation by Michelle Graham. GO Biological Process: regulation of flower development
SoyBase N/A ISS
GO:0042744 GO-bp
Annotation by Michelle Graham. GO Biological Process: hydrogen peroxide catabolic process
SoyBase N/A ISS
GO:0048467 GO-bp
Annotation by Michelle Graham. GO Biological Process: gynoecium development
SoyBase N/A ISS
GO:0048481 GO-bp
Annotation by Michelle Graham. GO Biological Process: ovule development
SoyBase N/A ISS
GO:0005634 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: nucleus
SoyBase N/A ISS
GO:0003677 GO-mf
Annotation by Michelle Graham. GO Molecular Function: DNA binding
SoyBase N/A ISS
GO:0003712 GO-mf
Annotation by Michelle Graham. GO Molecular Function: transcription cofactor activity
SoyBase N/A ISS
GO:0005515 GO-mf
Annotation by Michelle Graham. GO Molecular Function: protein binding
SoyBase N/A ISS
GO:0046982 GO-mf
Annotation by Michelle Graham. GO Molecular Function: protein heterodimerization activity
SoyBase N/A ISS
GO:0060090 GO-mf
Annotation by Michelle Graham. GO Molecular Function: binding, bridging
SoyBase N/A ISS
PTHR10378 Panther
LIM DOMAIN BINDING PROTEIN-RELATED
JGI ISS
PTHR10378:SF6 Panther
JGI ISS
UniRef100_B9S2M5 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: Transcriptional corepressor SEUSS, putative n=1 Tax=Ricinus communis RepID=B9S2M5_RICCO
SoyBase E_val: 0 ISS
UniRef100_I1MAE2 UniRef
Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1MAE2_SOYBN
SoyBase E_val: 0 ISS
Expression Patterns of Glyma14g27380
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE
Gene model name correspondences to Glyma14g27380 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.14g119800 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma14g27380
Coding sequences of Glyma14g27380
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma14g27380.1 sequence type=CDS gene model=Glyma14g27380 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGGTGCCTCCTGGGCCACCCACGCCGATTGGTGGTGCCCAGCCTGTGCCGCCGTCTCTTTTGAGGTCGAATTCGGGAATGTTGGGGGGCCAAGGGGGCCCTGTGCCTTCACAAACTTCGTTCCCTTCGCTGGTGGCGCAGCGAAACCAGTTTAACAACATGAATATGCTAGGGAATATGTCTAATGTGACTTCCTTGCTGAATCAGTCTTTCCCGAATGGAATTCCAAATTCAGGGCATGGTGGCCCTGGGAACAGCCAGCGCAGCGGAGGCATTGATGCTAGGGCGGAAGCGGATCCACTATCTGGTGTTGGCAGTGGAATGAATTTTGGCAATCAGTTGCAATCAAATTTGATGAACCCTGGTTCATCTGGTCAAGGTCAGGGTCAACAGTTTTCAAATGCTTCTGGTAGTCAGATGTTGCCAGATCAACAGCATTCGCAGCAACTTGAACCTCAGAATTTCCAACAACATAGTCAGCCATCAATGCAACAGTTCTCTGCTCCTTTGAATGCTCAGCAGCAGCAGCAGCAGCATTTTCAGTCCATTCGAGGAGGGATGGGTGGTGTTGGGCAGGTGAAGTTGGAGTCGCAGGTAAACAATGATCAGTTTGGGCACCAGCAGCAGTTGCCGTCAAGGAATCTTGCTCAGGTGAAGTTGGAACCGCAACAACTTCAAACATTGAGAAATATGGCACCGGTGAAACTGGAGCCCCAGCATAATGATCAGCAGTTTTTGCATCAGCAACAACAGCAGCAGCAGCAGCATCAACAACAACAACAGCAACAACTGCTCCACATGTCAAGGCAATCCTCTCAGGCTGCTGCTGCTCAGATGAATCATCTTTTGCAGCAGCAGAGACTTTTGCAATATCAACAACATCAGCAGCAACAGCAGCAACTCCTGAAGACAATGCCTCAACAACGGTCCCCGCTATCACAGCAGTTTCAACAGCAAAATATGCCTATGAGGTCTCCTGTGAAACCAGCATATGAACCCGGGATGTGTGCTAGGCGGCTGACACATTACATGTATCAGCAGCAACATAGACCTGAAGATAACAATATTGAATTCTGGAGGAAATTTGTTGCTGAGTATTTTGCTCCAAATGCCAAAAAGAAGTGGTGTGTTTCCATGTATGGAAGTGGCAGACAAACTACTGGAGTTTTCCCTCAGGATGTATGGCACTGTGAAATATGTAATTGCAAACCTGGGCGTGGGTTTGAAGCAACTGCTGAGGTTCTTCCCAGGCTTTTCAAAATAAAATATGAAAGTGGTACTTTGGAAGAGCTACTTTATGTTGACATGCCTCGGGAATATCATAATTCCTCTGGCCAGATTGTTCTAGATTATGCAAAAGCAATACAAGAAAGCGTTTTTGAGCAACTTCGTGTTGTTCGTGATGGTCAACTTCGAATAGTTTTCTCTCCAGACCTGAAGATATGCTCTTGGGAATTTTGTGCTCGACGCCATGAAGAGCTCATCCCCAGAAGATTGTTAATACCTCAGGTTAGTCAACTTGGAGTAGTTGCTCAAAAATACCAGGCATTTACTCAAAATGCAACACCCAATTTATCCGTTCCAGAGTTACAAAATAATTGCAATCTGTTTGTTGCATCAGCCCGTCAGTTGGCAAAAGCTTTAGAAGTTCCATTGGTCAATGATTTAGGATATACAAAGAGATACGTGCGGTGCCTTCAGATATCAGAAGTGGTAAATAGTATGAAAGACTTGATAGATTATAGCAGAGAAACCAGAACTGGTCCCATGGATAGCTTAGCTAAATTCCCTCGTAGAACAAGTGGTTCATCTGGACTTCATAGTCAGGCACAACAGTCTGAAGATCAATTACAGCAGCAGTCACAGCCACCCCAGCATATGGTGCCCCATACTTCTAATGGTGATCAAAACTCTGTGCAAACTGCTGCTATGCAAATTGCTTCTAGCAATGGTGTGACAAGTGTAAATAATTCCGTCAATGCAGCATCTGCATCTGCATCAAACACCACAAGCACCATTGTTGGACTTCTCCACCAGAATTCTATGAATTCTAGACAAAATTCAATGAACAATGCAAGCAGCCCTTATGGAGGTAGTTCTGTTCAAATTCCATCCCCAGGTTCCTCTGGTAATGTACCACAAGCGCAGCCAAATCAATCCCCTTTTCAATCACCGACACCATCCTCATCTAACAACCCACAAACATCTCACCCTGCCATAACTTCTGCAAACCACATGGGTACAGCAAACTCACCAGCTAATATTACCTTGCAACAACAGCAGACATCTCTTCCTGCTGAAGCTGACCCTAGCGATGCCCAGAGCTCAGTCCAGAAAATCATTCATGAGATGATGATTTCTTCCCAGATGAATGGCCCAGGTGGAATGGCTGGCACTGGTTTGCTTGGAAATGACATGAAGAATGTAAACGGGATTCTACCAGGGAGTAACAGTACAGGGCTCAACAGTGGCAGTGGCCTGGCGGGTAATGGGGCTGTGAACAGTAGTAATTCAGGTGTTGGGGTTGGTGGATATGGCACAATGGGTCTTGGTCCATCTGGTATGACCAATGGAATGAGACCTGTAATGGGACATAATTCAATCATGAATGGAAGGGGAGGAATGGCATCTCTTGCGCGAGATCAAGTTATGAATCATCAACAGGATCTGTCAAGCCAACTACTTAGTGGGCTAGGAGGAGTAAATGGCTTTAGTAATCTTCAATTTGATTGGAAACCGTCTCCATGA
Predicted protein sequences of Glyma14g27380
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma14g27380.1 sequence type=predicted peptide gene model=Glyma14g27380 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MVPPGPPTPIGGAQPVPPSLLRSNSGMLGGQGGPVPSQTSFPSLVAQRNQFNNMNMLGNMSNVTSLLNQSFPNGIPNSGHGGPGNSQRSGGIDARAEADPLSGVGSGMNFGNQLQSNLMNPGSSGQGQGQQFSNASGSQMLPDQQHSQQLEPQNFQQHSQPSMQQFSAPLNAQQQQQQHFQSIRGGMGGVGQVKLESQVNNDQFGHQQQLPSRNLAQVKLEPQQLQTLRNMAPVKLEPQHNDQQFLHQQQQQQQQHQQQQQQQLLHMSRQSSQAAAAQMNHLLQQQRLLQYQQHQQQQQQLLKTMPQQRSPLSQQFQQQNMPMRSPVKPAYEPGMCARRLTHYMYQQQHRPEDNNIEFWRKFVAEYFAPNAKKKWCVSMYGSGRQTTGVFPQDVWHCEICNCKPGRGFEATAEVLPRLFKIKYESGTLEELLYVDMPREYHNSSGQIVLDYAKAIQESVFEQLRVVRDGQLRIVFSPDLKICSWEFCARRHEELIPRRLLIPQVSQLGVVAQKYQAFTQNATPNLSVPELQNNCNLFVASARQLAKALEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYSRETRTGPMDSLAKFPRRTSGSSGLHSQAQQSEDQLQQQSQPPQHMVPHTSNGDQNSVQTAAMQIASSNGVTSVNNSVNAASASASNTTSTIVGLLHQNSMNSRQNSMNNASSPYGGSSVQIPSPGSSGNVPQAQPNQSPFQSPTPSSSNNPQTSHPAITSANHMGTANSPANITLQQQQTSLPAEADPSDAQSSVQKIIHEMMISSQMNGPGGMAGTGLLGNDMKNVNGILPGSNSTGLNSGSGLAGNGAVNSSNSGVGVGGYGTMGLGPSGMTNGMRPVMGHNSIMNGRGGMASLARDQVMNHQQDLSSQLLSGLGGVNGFSNLQFDWKPSP*