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Report for Sequence Feature Glyma14g27303

Feature Type:gene_model
Chromosome:Gm14
Start:33432732
stop:33462103
Source:JGI
Version:Wm82.a1.v1.1
High confidence:yes



A newer version of this gene model can be found here:

Annotations for Glyma14g27303
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G25800AT Annotation by Michelle Graham. TAIR10: Polynucleotidyl transferase, ribonuclease H-like superfamily protein | chr5:8979761-8982724 REVERSE LENGTH=567 SoyBaseE_val: 0ISS
GO:0005622GO-cc Annotation by Michelle Graham. GO Cellular Compartment: intracellular SoyBaseN/AISS
GO:0005634GO-cc Annotation by Michelle Graham. GO Cellular Compartment: nucleus SoyBaseN/AISS
GO:0003676GO-mf Annotation by Michelle Graham. GO Molecular Function: nucleic acid binding SoyBaseN/AISS
GO:0004527GO-mf Annotation by Michelle Graham. GO Molecular Function: exonuclease activity SoyBaseN/AISS
KOG2248 KOG 3'-5' exonuclease JGI ISS
PTHR12801Panther EXONUCLEASE JGI ISS
PTHR12801:SF19Panther EXONUCLEASE FAMILY PROTEIN JGI ISS
PF00929PFAM Exonuclease JGI ISS
UniRef100_B9S2M9UniRef Annotation by Michelle Graham. Most informative UniRef hit: Rnase h, putative n=1 Tax=Ricinus communis RepID=B9S2M9_RICCO SoyBaseE_val: 0ISS
UniRef100_UPI000233BA8BUniRef Annotation by Michelle Graham. Best UniRef hit: UPI000233BA8B related cluster n=1 Tax=unknown RepID=UPI000233BA8B SoyBaseE_val: 0ISS

Expression Patterns of Glyma14g27303
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma14g27303 not represented in the dataset
Glyma14g27303 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma14g27303 Gene Call Version Wm82.a1.v1.1
Corresponding NameAnnotation VersionEvidenceComments
Glyma.14g119200 Wm82.a2.v1IGC As supplied by JGI

References for Glyma14g27303
Schmutz et al. 2010
  Genome sequence of the palaeopolyploid soybean
  Nature 2010, 463:178-183

Coding sequences of Glyma14g27303
>Glyma14g27303.1   sequence type=CDS   gene model=Glyma14g27303   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGGTTCCTTGGAAGCCGAAAATAAAACTCTCCGTGGCGCCGAAGAAGAAGAGGATTCTACTTCTACCAAGAAACGCGGCAAGTTCTACGACATTTATGGACCCGAAGGCAAGGCGGATGTTGTTTTCAACTCACCAGAAGATAATTCAACTCTCAATCTTAGTGATGTTCAAGGACTTGTAACTTGGGTGCTCGGTGAAGGATTTATGCCGTCATGGGTTTTTATTAAGAATAAACCTCTTATTCCCAAAGTGGTTATGCTCTATGTGCCAGGCCTGGACGCAGCTTTGTTCTTGTCGCAGTCTAAAATGCTTCCCAGATTAAAAATTTTCTGTGGCAAACCAAGGGCAGTCCTAGCTCTTAGCTGTGTATCAGATGGTATGCAGACGATAGATGCACTCCTAACATGCAAGATGAAAAGGAAAAGGGACGAGAATAGTTCAATTATGAGGAAATCTGCTCTGACATCTCAACAAGACAGTCTATCGTTTAAGGAGCTTACAAAAGACATACCTTTCCCTGTTACATACTATACACTAACAGAGAAAGAGTTGGAAGAGAATGGATATTCTGTTAATAAGCCAGGTTTTCTTTCTACTTTGCCCGCACCTTCGGGATCTCCTTTTTATGATATGTTGGCACTTGATTGTGAGATGTGCATAACAAGTGAAGGTTTTGAGCTGTCAAGAATTACTTTAGTGGATGTCAAAGGACAGGTTTTGATAGATAAGTTGGTTAAACCATCAAATGCCATCACTGATTACAACACAAGATATAGTGGAATAACGTCAGAGATGTTAGATGGCGTGACGACAAGTCTGAGAGACATTCAGGAAGAGTTCCTAAAGTTGGTTCACAAGGAGACTATCCTTGTTGGGCATTCTCTGGAAAACGATTTGTTAGCATTGAAGATATCTCATGACTTGGTCATTGACACAGCAGTGTTATACAAACACCCCCGAGGATCAACTCATAAAAATGCTCTACGGTTTCTTACTAAGAGATTTCTTTCAAGGGAGATACAACAGTCAGGGAATGGACATGACAGCATTGAAGATGCTAGAGCTACCATGGAATTGGCACTATTGAAGATCAGAAATGGGCCTAATTTTGGTTCCCCTCCATCCTTTACCCGGAAAAAGCTCCTTTCTATTCTGAGTGAGTCTGGCAAAACCTCCTCACTGATTGATGATATATCTGTAGTAAAACGGTATGCCTCAGAGTCCTCTCATGCAATTCCAGTGACCTCTGATGATGTAGCACTTGCAAAGGCCAACAAGGAGGTGAAGAATGGAAAGGTACATTTTATCTGGACTCAGTTTTCGGAGCTACACTCATACTTGAAGAAACAAGCTGAAGATTCTGAGAGGTTGAATAGAAGACTTGCAGAGATGTTGGCATTACAAACATGTCAGAATAATTTTACAAAAGGGAAAGACTTCAAGTTGAAAGCATCTGCTGAACTGAAGGAAATTCTGGCTCGCATGGATGCTAGAATTCATAATCTGTATTTGTCATTACCCACAAATGCCATGATGATAATTTGCACTGGTCACGGAGACACTGCTATTGTCCGCAGGCTGAGAAAAATGCTTGCGGAGCAGAATGAAAGTAATATATGTCGTGAAAAGATTGTGGAAATATTGGAAGAGGTTCAGGCCCGAGCTGAAGTAGCCTTGTGTTTTGTAGGTGTAAAACATTGA
Predicted protein sequences of Glyma14g27303
>Glyma14g27303.1   sequence type=predicted peptide   gene model=Glyma14g27303   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MGSLEAENKTLRGAEEEEDSTSTKKRGKFYDIYGPEGKADVVFNSPEDNSTLNLSDVQGLVTWVLGEGFMPSWVFIKNKPLIPKVVMLYVPGLDAALFLSQSKMLPRLKIFCGKPRAVLALSCVSDGMQTIDALLTCKMKRKRDENSSIMRKSALTSQQDSLSFKELTKDIPFPVTYYTLTEKELEENGYSVNKPGFLSTLPAPSGSPFYDMLALDCEMCITSEGFELSRITLVDVKGQVLIDKLVKPSNAITDYNTRYSGITSEMLDGVTTSLRDIQEEFLKLVHKETILVGHSLENDLLALKISHDLVIDTAVLYKHPRGSTHKNALRFLTKRFLSREIQQSGNGHDSIEDARATMELALLKIRNGPNFGSPPSFTRKKLLSILSESGKTSSLIDDISVVKRYASESSHAIPVTSDDVALAKANKEVKNGKVHFIWTQFSELHSYLKKQAEDSERLNRRLAEMLALQTCQNNFTKGKDFKLKASAELKEILARMDARIHNLYLSLPTNAMMIICTGHGDTAIVRRLRKMLAEQNESNICREKIVEILEEVQARAEVALCFVGVKH*






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