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Integrating Genetics and Genomics to Advance Soybean Research


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Report for Sequence Feature Glyma14g22140

Feature Type:gene_model
Chromosome:Gm14
Start:26064851
stop:26065822
Source:JGI
Version:Wm82.a1.v1.1
High confidence:yes



A newer version of this gene model can be found here:

Annotations for Glyma14g22140
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G53570AT Annotation by Michelle Graham. TAIR10: Ypt/Rab-GAP domain of gyp1p superfamily protein | chr5:21760924-21763082 REVERSE LENGTH=550 SoyBaseE_val: 7.00E-44ISS
GO:0005622GO-cc Annotation by Michelle Graham. GO Cellular Compartment: intracellular SoyBaseN/AISS
GO:0005794GO-cc Annotation by Michelle Graham. GO Cellular Compartment: Golgi apparatus SoyBaseN/AISS
PTHR22957Panther TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN JGI ISS
PTHR22957:SF31Panther GTPASE ACTIVATOR PROTEIN OF RAB-LIKE SMALL GTPASES-LIKE PROTEIN JGI ISS
UniRef100_G7J869UniRef Annotation by Michelle Graham. Most informative UniRef hit: GTPase activator-like protein of Rab-like small GTPases n=1 Tax=Medicago truncatula RepID=G7J869_MEDTR SoyBaseE_val: 2.00E-62ISS
UniRef100_I1JYL4UniRef Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1JYL4_SOYBN SoyBaseE_val: 8.00E-74ISS

Expression Patterns of Glyma14g22140
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma14g22140 not represented in the dataset
Glyma14g22140 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma14g22140 Gene Call Version Wm82.a1.v1.1
Corresponding NameAnnotation VersionEvidenceComments

References for Glyma14g22140
Schmutz et al. 2010
  Genome sequence of the palaeopolyploid soybean
  Nature 2010, 463:178-183

Coding sequences of Glyma14g22140
>Glyma14g22140.1   sequence type=CDS   gene model=Glyma14g22140   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
GGTCGTCTTAAATCACCATGGTCACGCAGGAAAAGAAAACATGTCCTTACACCTCAGCAATGGAAAAGCGTGTTTACCCAGGATGGGGGTATACGAGATGGTGGAATTAAGTTCATGAAAAGAGTTCGTAGTGGAGGTGTTGATCCTAGTATCAGAGCTGAAGTTTGGCCATTCCTACTTGGAGTCTATGACTTGGACAGTACAAAAGAAGAAAGAGATGCTATAACAACTCAAAATAGAAAGGAGTATGAGAAACTCCGCAGACAATGCCGCCAACTACTAAAGCACAGCAATGGGAGCTTTAAGTTAAATGAAATAGGTGAAATCAACTATGAAGGAGATAGTGCAAGTTTTATCATGTGA
Predicted protein sequences of Glyma14g22140
>Glyma14g22140.1   sequence type=predicted peptide   gene model=Glyma14g22140   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
GRLKSPWSRRKRKHVLTPQQWKSVFTQDGGIRDGGIKFMKRVRSGGVDPSIRAEVWPFLLGVYDLDSTKEERDAITTQNRKEYEKLRRQCRQLLKHSNGSFKLNEIGEINYEGDSASFIM*






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