|
A newer version of this gene model can be found here:
Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
---|---|---|---|---|---|
AT3G03960 | AT | Annotation by Michelle Graham. TAIR10: TCP-1/cpn60 chaperonin family protein | chr3:1024432-1027604 FORWARD LENGTH=549 | SoyBase | E_val: 1.00E-26 | ISS |
GO:0000085 | GO-bp | Annotation by Michelle Graham. GO Biological Process: G2 phase of mitotic cell cycle | SoyBase | N/A | ISS |
GO:0001510 | GO-bp | Annotation by Michelle Graham. GO Biological Process: RNA methylation | SoyBase | N/A | ISS |
GO:0006094 | GO-bp | Annotation by Michelle Graham. GO Biological Process: gluconeogenesis | SoyBase | N/A | ISS |
GO:0006457 | GO-bp | Annotation by Michelle Graham. GO Biological Process: protein folding | SoyBase | N/A | ISS |
GO:0007010 | GO-bp | Annotation by Michelle Graham. GO Biological Process: cytoskeleton organization | SoyBase | N/A | ISS |
GO:0009220 | GO-bp | Annotation by Michelle Graham. GO Biological Process: pyrimidine ribonucleotide biosynthetic process | SoyBase | N/A | ISS |
GO:0009640 | GO-bp | Annotation by Michelle Graham. GO Biological Process: photomorphogenesis | SoyBase | N/A | ISS |
GO:0009909 | GO-bp | Annotation by Michelle Graham. GO Biological Process: regulation of flower development | SoyBase | N/A | ISS |
GO:0010498 | GO-bp | Annotation by Michelle Graham. GO Biological Process: proteasomal protein catabolic process | SoyBase | N/A | ISS |
GO:0034968 | GO-bp | Annotation by Michelle Graham. GO Biological Process: histone lysine methylation | SoyBase | N/A | ISS |
GO:0044267 | GO-bp | Annotation by Michelle Graham. GO Biological Process: cellular protein metabolic process | SoyBase | N/A | ISS |
GO:0005737 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: cytoplasm | SoyBase | N/A | ISS |
GO:0005829 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: cytosol | SoyBase | N/A | ISS |
GO:0009506 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: plasmodesma | SoyBase | N/A | ISS |
GO:0016020 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: membrane | SoyBase | N/A | ISS |
GO:0005524 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: ATP binding | SoyBase | N/A | ISS |
GO:0051082 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: unfolded protein binding | SoyBase | N/A | ISS |
PTHR11353 | Panther | CHAPERONIN | JGI | ISS | |
PF00118 | PFAM | TCP-1/cpn60 chaperonin family | JGI | ISS | |
UniRef100_G7KQ56 | UniRef | Annotation by Michelle Graham. Most informative UniRef hit: T-complex protein 1 subunit theta n=1 Tax=Medicago truncatula RepID=G7KQ56_MEDTR | SoyBase | E_val: 2.00E-31 | ISS |
UniRef100_UPI0002339925 | UniRef | Annotation by Michelle Graham. Best UniRef hit: UPI0002339925 related cluster n=1 Tax=unknown RepID=UPI0002339925 | SoyBase | E_val: 5.00E-35 | ISS |
Glyma14g21576 not represented in the dataset |
Glyma14g21576 not represented in the dataset |
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
Corresponding Name | Annotation Version | Evidence | Comments |
---|---|---|---|
Glyma.14g143500 | Wm82.a2.v1 | IGC | As supplied by JGI |
Schmutz et al. 2010 Genome sequence of the palaeopolyploid soybean Nature 2010, 463:178-183 |
>Glyma14g21576.1 sequence type=CDS gene model=Glyma14g21576 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high ATGGGATGGACTAAACATTTTCAATGGCCCTGCAGGTTGGATCAATATGCTATAGCAAAATTTGCTAAAAGTTTTCAAATGATTCCTAGAACTTTGGCTGAGAATGTTGGGTTCAATGCTGGCATTGATTTGGAAGAAGGCGTATGTAAGGATATCTCAACCTTGTGCATTTGGGATCTCCATGTGACTAAGTTATTTGCTCTTAAATATGCTACTGATGTTGCATGCACTGTACTACGTGTGGACTAG
>Glyma14g21576.1 sequence type=predicted peptide gene model=Glyma14g21576 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high MGWTKHFQWPCRLDQYAIAKFAKSFQMIPRTLAENVGFNAGIDLEEGVCKDISTLCIWDLHVTKLFALKYATDVACTVLRVD*
Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA | ||