Glyma14g21140 - SoyBase

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Report for Sequence Feature Glyma14g21140

Feature Type:	gene_model
Chromosome:	Gm14
Start:	24457137
stop:	24461969
Source:	JGI
Version:	Wm82.a1.v1.1
High confidence:	yes

A newer version of this gene model can be found here:

Annotations for Glyma14g21140

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT5G25630	AT	Annotation by Michelle Graham. TAIR10: Tetratricopeptide repeat (TPR)-like superfamily protein \| chr5:8947426-8949424 FORWARD LENGTH=574	SoyBase	E_val: 0	ISS
GO:0008150	GO-bp	Annotation by Michelle Graham. GO Biological Process: biological process	SoyBase	N/A	ISS
GO:0009507	GO-cc	Annotation by Michelle Graham. GO Cellular Compartment: chloroplast	SoyBase	N/A	ISS
PTHR24349	Panther	SERINE/THREONINE-PROTEIN KINASE	JGI		ISS
PTHR24349:SF45	Panther		JGI		ISS
PF01535	PFAM	PPR repeat	JGI		ISS
UniRef100_G7I4C0	UniRef	Annotation by Michelle Graham. Most informative UniRef hit: Pentatricopeptide repeat-containing protein n=1 Tax=Medicago truncatula RepID=G7I4C0_MEDTR	SoyBase	E_val: 0	ISS
UniRef100_UPI000233ACF4	UniRef	Annotation by Michelle Graham. Best UniRef hit: UPI000233ACF4 related cluster n=1 Tax=unknown RepID=UPI000233ACF4	SoyBase	E_val: 0	ISS

Expression Patterns of Glyma14g21140

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology


Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma14g21140 Gene Call Version Wm82.a1.v1.1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma.14g141800	Wm82.a2.v1	IGC	As supplied by JGI

References for Glyma14g21140

Schmutz et al. 2010
Genome sequence of the palaeopolyploid soybean
Nature 2010, 463:178-183

Coding sequences of Glyma14g21140

Limit To All Plant Sequences

>Glyma14g21140.1   sequence type=CDS   gene model=Glyma14g21140   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGGGAAACCTGGCAATGATGATACTGATTGTGGAACTAGAAGTAGAAAGCAATCAGGAAATAACAACATGAAGAAAGGGTTGTTTCACTCAGAATTTGACAAGGGGAATCATTTTGATGGCAAGAATCACATGAATGAAATTACTAAGGCCACAAATTCAGGCAGTCAACCCAGCTGCACTTTCTGCATGGGTAAAAATGATTGCCAAATCGTACGCTCAAGAACAAAAGTAATGAATATTCTGATCAAGAGTGGAAAACCTCAGGAAGCTATAGTCATTTTTCAAAATCTGATTGAAGGAGGGCACCAACCATCTTTAGCAACATACACAACCCTGTTAAATGCCTTAACCACTCAGAAGTATTTCAAGCCTATACATTCCATTGTCTCACTGGTTGAAGAAAAACAAATGAAGCCTGACTCAATATTTTTTAATGCTCTTATAAATGCATTTGCTGAATCTGGGAACATGGAGGATGCCAAGAAAGTTGTTCAGAAAATGAAAGAAAGTGGATTAAAACCTAGTGCTTGTACTTATAACACATTGATAAAAGGATATGGGATTGCAGGTAAGCCTGATGAGTCAATGAAACTGCTAGATCTGATGTCAACAGAAGGAAATGTGAAACCCAATCTCAAGACATACAATATGCTAATAAGAGCTTTGTGTAAAATGGAGAACATTTCTGAGGCATGGAATGTGGTGTATAAGATGACTGCTTCGGGAATGCAACCAGATGTTGTTACCTTCAACACTATAGCAACCGCTTATGCTCAGAATGGAAAGACTGCTCAGGCTGAAGCAATGATTTTAGAGATGCAGAGGAACAGTTTGAAACCCAATGAGAGAACTTGCACCATCATCATAAGTGGATATTGTAGAGAAGGTAAAGTACAGGAAGCTTTAAGGTTTGTATACAGGATGAAGGATCTGGGGATGCAGCCTAATCTTATTGTACTTAATTCCCTGGTTAATGGTTTTGTGGACATGATGGATCGAGATGGTGTCGATGAGGTGTTAAAGTTGATGGAAGAATTTCAGATCCGACCAGATGTGATAACATATAGTACTATAATGAATGCATGGAGCCAAGCTGGATTCTTGGAAAAATGCAAGGAAATCTACAATAACATGCTAAAATCTGGTGTTAAGCCAGATGCGCATGCTTATAGTATTCTTGCTAAAGGTTATGTGCGAGCACAAGAAATGGAAAAGGCTGAAGAAATGCTTACTGTCATGACTAAATCAGGTGTCCACCCAAATGTGGTTATATTTACAACTGTCATAAGTGGATGGTGCAGTGTTGGCAGAATGGACAATGCCATGAGGGTTTTTGACAAGATGGGTGAATTTGGGGTTTCTCCAAATTTGAAGACTTTTGAGACACTAATCTGGGGATATGCAGAAGCAAAACAACCCTGGAAAGCAGAAGGAATGCTCCAAATAATGGAAGAATTTCATGTTCAACCCAAGAAATCGACCATTTTGCTTGTTGCGGAAGCTTGGCGTTTTGCTGGATTTAAAGAAAGGGCAAAGACACTACTAAGGACTGTAAAAGCGAAGATGGCCAATTCAATAGGCAAAGACGACAATAAACCTGCTAAAATGTCAGAGAAAATTTATCAAAAGCCACATACTAATGCTCCTTTTTGTAGTCTCTTACAGATTCCGTCTATATCTTCCACTGACCAGAAAGGTTCAGCTTTAACATCTAGAAGAAATAGAAGGCTCCTTAGAGATGGTGCTGTGGAGACTCTGTTGCTCACAACAAAATTCAAGTGTCATCCTCAAATTTGTAGATATGGTGAAGGATTTTCCATTATGGGCAAACAGTTTCAAGGACAGCATGGTACATACCAATTTGCAAATTCATGTACAGCAGTATTCTTAAACTGA

Predicted protein sequences of Glyma14g21140

Limit To All Plant Sequences

>Glyma14g21140.1   sequence type=predicted peptide   gene model=Glyma14g21140   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MGKPGNDDTDCGTRSRKQSGNNNMKKGLFHSEFDKGNHFDGKNHMNEITKATNSGSQPSCTFCMGKNDCQIVRSRTKVMNILIKSGKPQEAIVIFQNLIEGGHQPSLATYTTLLNALTTQKYFKPIHSIVSLVEEKQMKPDSIFFNALINAFAESGNMEDAKKVVQKMKESGLKPSACTYNTLIKGYGIAGKPDESMKLLDLMSTEGNVKPNLKTYNMLIRALCKMENISEAWNVVYKMTASGMQPDVVTFNTIATAYAQNGKTAQAEAMILEMQRNSLKPNERTCTIIISGYCREGKVQEALRFVYRMKDLGMQPNLIVLNSLVNGFVDMMDRDGVDEVLKLMEEFQIRPDVITYSTIMNAWSQAGFLEKCKEIYNNMLKSGVKPDAHAYSILAKGYVRAQEMEKAEEMLTVMTKSGVHPNVVIFTTVISGWCSVGRMDNAMRVFDKMGEFGVSPNLKTFETLIWGYAEAKQPWKAEGMLQIMEEFHVQPKKSTILLVAEAWRFAGFKERAKTLLRTVKAKMANSIGKDDNKPAKMSEKIYQKPHTNAPFCSLLQIPSISSTDQKGSALTSRRNRRLLRDGAVETLLLTTKFKCHPQICRYGEGFSIMGKQFQGQHGTYQFANSCTAVFLN*

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