Glyma14g20670 - SoyBase

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Report for Sequence Feature Glyma14g20670

Feature Type:	gene_model
Chromosome:	Gm14
Start:	23730818
stop:	23737351
Source:	JGI
Version:	Wm82.a1.v1.1
High confidence:	yes

A newer version of this gene model can be found here:

Annotations for Glyma14g20670

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT5G25620	AT	Annotation by Michelle Graham. TAIR10: Flavin-binding monooxygenase family protein \| chr5:8935520-8938224 REVERSE LENGTH=417	SoyBase	E_val: 0	ISS
GO:0009851	GO-bp	Annotation by Michelle Graham. GO Biological Process: auxin biosynthetic process	SoyBase	N/A	ISS
GO:0055114	GO-bp	Annotation by Michelle Graham. GO Biological Process: oxidation-reduction process	SoyBase	N/A	ISS
GO:0004497	GO-mf	Annotation by Michelle Graham. GO Molecular Function: monooxygenase activity	SoyBase	N/A	ISS
GO:0004499	GO-mf	Annotation by Michelle Graham. GO Molecular Function: N,N-dimethylaniline monooxygenase activity	SoyBase	N/A	ISS
GO:0016491	GO-mf	Annotation by Michelle Graham. GO Molecular Function: oxidoreductase activity	SoyBase	N/A	ISS
GO:0050660	GO-mf	Annotation by Michelle Graham. GO Molecular Function: flavin adenine dinucleotide binding	SoyBase	N/A	ISS
GO:0050661	GO-mf	Annotation by Michelle Graham. GO Molecular Function: NADP binding	SoyBase	N/A	ISS
KOG1399	KOG	Flavin-containing monooxygenase	JGI		ISS
PTHR23023	Panther	DIMETHYLANILINE MONOOXYGENASE	JGI		ISS
PTHR23023:SF5	Panther	MONOOXYGENASE	JGI		ISS
PF00743	PFAM	Flavin-binding monooxygenase-like	JGI		ISS
UniRef100_G7I4C7	UniRef	Annotation by Michelle Graham. Most informative UniRef hit: Dimethylaniline monooxygenase n=1 Tax=Medicago truncatula RepID=G7I4C7_MEDTR	SoyBase	E_val: 0	ISS
UniRef100_UPI000233BF7B	UniRef	Annotation by Michelle Graham. Best UniRef hit: UPI000233BF7B related cluster n=1 Tax=unknown RepID=UPI000233BF7B	SoyBase	E_val: 0	ISS

Expression Patterns of Glyma14g20670

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology


Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma14g20670 Gene Call Version Wm82.a1.v1.1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma.14g141200	Wm82.a2.v1	IGC	As supplied by JGI

References for Glyma14g20670

Schmutz et al. 2010
Genome sequence of the palaeopolyploid soybean
Nature 2010, 463:178-183

Coding sequences of Glyma14g20670

Limit To All Plant Sequences

>Glyma14g20670.1   sequence type=CDS   gene model=Glyma14g20670   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGACTATTGCTTGAGAGAGCTAGAAGGAAAGCAAGCACATGACTCTCTATTCCTAGAGAAAATGAAGAATTCATTATCACAACGTACTACTACTAGTGAGAGATGTGTGTGGGTGCCAGGGCCAGTGATTGTGGGAGCAGGGCCTTCAGGGCTTGCAACAGCAGCATATCTCAAAGAGAAAGGAGTGCCAAGCCTAATCTTAGAAAGATCCAACTGCATAGCATCCTTGTGGCAACTCAAGACCTATGATAGGCTCCACCTTCACTTGCCAAAGAATTTTTGCGAACTTCCCTTGATGGGGTTTCCTTGTGACTTCCCCACATACCCTACAAAGCAGCAGTTCATAGAGTACTTGGAGAGCTATGCTGAGAGGTTTCACATTAGGCCAAGGTTTAATGAGACGGTCCAGCACGCGGAGTTTGACGCCACGCTCGGGTTTTGGAGGGTGAAGAGCTTGAACAAGAGGGAGGTGGCAACAGAGTTTGTGTGCAGGTGGCTGATTGTGGCCACTGGGGAGAATGCAGAGGCTGTGGTGCCTGGTATTGAAGGAATGGGGGAGTTTGGTGGGACCATAAAGCACACAAGTTTGTATAAGAGTGGGGAAGAGTTTAGAGGGAAGAGGGTGTTGGTTGTTGGGTGTGGGAATTCAGGGATGGAAGTCTGCTTGGATCTTTGCAACCATAATGCTACTCCTTCTCTTGTGGTCAGAGATACTGTACATATCTTACCACGAGAGATGCTGGGAAAATCAACTTTTGGGTTGTCCATGTGGTTGCTCAAGTGGCTGCCCATTCGGTTTGTGGATCGGTTCCTTCTCATAGTGTCATGGCTCATGCTTGGTGACACGGCTCGGTTCGGATTGGACCGGCCGAAATTGGGTCCCCTTCAGCTCAAAAACCTGTCCGGAAAGACACCAGTGCTAGATGTGGGTACCCTTGCCAAGATCAAAAGTGGACATATAAAGGTACGGCCTGGCATCAAGCGCTTAAAACGTTATACTGTTGAATTTGTTGATGGAAGGACAGAGAATTTTGATGCCCTCATATTGGCAACTGGTTACAAAAGTAATGTGCCCTATTGGCTAAAGGAAGAGGATATGTTCTCTAAGGAAGATGGGTTCCCTACGAAGCCATTTCCAAATGGATGGAAGGGTGAGAATGGGCTCTATGCAGTTGGTTTCACCAAGCGTGGACTACTTGGTGCATCAATGGATGCCAAGAGAATAGCTGAGGATATTGAAAGGTGTTGGAAAGCAAAGCATAGTACTTCTTTTTCTCTCTCACTTAATGTGCCACAATCCAATTCATGA

Predicted protein sequences of Glyma14g20670

Limit To All Plant Sequences

>Glyma14g20670.1   sequence type=predicted peptide   gene model=Glyma14g20670   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MDYCLRELEGKQAHDSLFLEKMKNSLSQRTTTSERCVWVPGPVIVGAGPSGLATAAYLKEKGVPSLILERSNCIASLWQLKTYDRLHLHLPKNFCELPLMGFPCDFPTYPTKQQFIEYLESYAERFHIRPRFNETVQHAEFDATLGFWRVKSLNKREVATEFVCRWLIVATGENAEAVVPGIEGMGEFGGTIKHTSLYKSGEEFRGKRVLVVGCGNSGMEVCLDLCNHNATPSLVVRDTVHILPREMLGKSTFGLSMWLLKWLPIRFVDRFLLIVSWLMLGDTARFGLDRPKLGPLQLKNLSGKTPVLDVGTLAKIKSGHIKVRPGIKRLKRYTVEFVDGRTENFDALILATGYKSNVPYWLKEEDMFSKEDGFPTKPFPNGWKGENGLYAVGFTKRGLLGASMDAKRIAEDIERCWKAKHSTSFSLSLNVPQSNS*

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