|
A newer version of this gene model can be found here:
Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
---|---|---|---|---|---|
AT5G25610 | AT | Annotation by Michelle Graham. TAIR10: BURP domain-containing protein | chr5:8914498-8916684 REVERSE LENGTH=392 | SoyBase | E_val: 9.00E-123 | ISS |
GO:0009269 | GO-bp | Annotation by Michelle Graham. GO Biological Process: response to desiccation | SoyBase | N/A | ISS |
GO:0009409 | GO-bp | Annotation by Michelle Graham. GO Biological Process: response to cold | SoyBase | N/A | ISS |
GO:0009651 | GO-bp | Annotation by Michelle Graham. GO Biological Process: response to salt stress | SoyBase | N/A | ISS |
GO:0009737 | GO-bp | Annotation by Michelle Graham. GO Biological Process: response to abscisic acid stimulus | SoyBase | N/A | ISS |
GO:0005576 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: extracellular region | SoyBase | N/A | ISS |
GO:0005768 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: endosome | SoyBase | N/A | ISS |
GO:0005794 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: Golgi apparatus | SoyBase | N/A | ISS |
GO:0005802 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: trans-Golgi network | SoyBase | N/A | ISS |
GO:0045735 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: nutrient reservoir activity | SoyBase | N/A | ISS |
PF03181 | PFAM | BURP domain | JGI | ISS | |
UniRef100_C0L012 | UniRef | Annotation by Michelle Graham. Most informative UniRef hit: BURP domain protein 2 n=1 Tax=Glycine max RepID=C0L012_SOYBN | SoyBase | E_val: 0 | ISS |
UniRef100_I1M9X5 | UniRef | Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1M9X5_SOYBN | SoyBase | E_val: 0 | ISS |
Glyma14g20440 not represented in the dataset |
Glyma14g20440 not represented in the dataset |
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
Corresponding Name | Annotation Version | Evidence | Comments |
---|---|---|---|
Glyma.14g140900 | Wm82.a2.v1 | IGC | As supplied by JGI |
Schmutz et al. 2010 Genome sequence of the palaeopolyploid soybean Nature 2010, 463:178-183 |
>Glyma14g20440.1 sequence type=CDS gene model=Glyma14g20440 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high ATGGAGTTTCACATTCTTCCCATCATTACTTTTCTCATGCTTGTTGTGGCAACTAATGCTGATGCTGCATTACCTCCTGCATTTTACTGGAAGTCCAAGCTTCCTACCACACCAATGCCGAAAGCCATCACTGATTTGCTACAACCTGATTGGAAGGAAGAGAAAGACACCTCTGTGGATGTAGGGAAAGGTGGAGTAAATGTTGGTGTAGAAAAGGGAAACCAAGGACCAGGAGATGGCACTGATGTTAATGTTGGTGGTGGAGACGGTGGAGTGAATGTGCACACAGGACCAAAGGGTAAGCCAGTTCACGTTGGAGTGGGCCCACATTCTCCATTTGATTACAACTATGCAGCCAGCGAGACCCAATTACATGATGACCCCAATGTGGCACTCTTCTTCTTGGAAAAGGACTTGCACCACGGAACAAAATTGAACCTTCACTTCACTATCTACTACACCTCAAATGTTGATGCCACGTTCTTGCCTCGATCAGTTTCTGATTCCATACCCTTTTCGTCAAACAAGGTGAATGATGTATTAAACAAGTTTTCAATCAAGGACGGGTCAGATGAGGCTAAAACTGTGAAGAACACTATTAATGAGTGTGAAGGACCTAGCATTAAGGGAGAGGAAAAGCGTTGCGTGACTTCACTTGAGTCCATGGTTGATTTCGCCACTACCAAGCTCGGGAGCAACAATGTTGATGCTGTTTCCACAGAAGTGACAAAAAAAGATAATGAGTTACAACAGTATACAATGGCACCAGGGGTTAAGAGGTTGGGTGAGGACAAGGCTAGTGTTGTGTGTCACAAGGAGAATTACCCTTATGCAGTGTTTTATTGCCACAAATCAGAAACCACAAAAGCCTATTCTGTCCCATTGGAGGGTGCTGATGGAAGCAGGGTCAAAGCAGTTGCAGTGTGCCATACTGACACATCAAAGTGGAATCCCAAGCATTTGGCGTTTCAAGTGCTTAAGGTTCAGCCAGGAACTGTTCCTGTCTGCCACTTCCTGCCTCAGGATCATGTTGTCTTTGTTCCCAAGTAG
>Glyma14g20440.1 sequence type=predicted peptide gene model=Glyma14g20440 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high MEFHILPIITFLMLVVATNADAALPPAFYWKSKLPTTPMPKAITDLLQPDWKEEKDTSVDVGKGGVNVGVEKGNQGPGDGTDVNVGGGDGGVNVHTGPKGKPVHVGVGPHSPFDYNYAASETQLHDDPNVALFFLEKDLHHGTKLNLHFTIYYTSNVDATFLPRSVSDSIPFSSNKVNDVLNKFSIKDGSDEAKTVKNTINECEGPSIKGEEKRCVTSLESMVDFATTKLGSNNVDAVSTEVTKKDNELQQYTMAPGVKRLGEDKASVVCHKENYPYAVFYCHKSETTKAYSVPLEGADGSRVKAVAVCHTDTSKWNPKHLAFQVLKVQPGTVPVCHFLPQDHVVFVPK*
Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA | ||