Glyma14g20193 - SoyBase

SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma14g20193

Feature Type:	gene_model
Chromosome:	Gm14
Start:	23321112
stop:	23322391
Source:	JGI
Version:	Wm82.a1.v1.1
High confidence:	yes

A newer version of this gene model can be found here:

Annotations for Glyma14g20193

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
UniRef100_G7IVN4	UniRef	Annotation by Michelle Graham. Most informative UniRef hit: 60S ribosomal protein L23 n=1 Tax=Medicago truncatula RepID=G7IVN4_MEDTR	SoyBase	E_val: 1.00E-09	ISS
UniRef100_I1KC48	UniRef	Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein (Fragment) n=1 Tax=Glycine max RepID=I1KC48_SOYBN	SoyBase	E_val: 1.00E-16	ISS

Expression Patterns of Glyma14g20193

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma14g20193 not represented in the dataset	Glyma14g20193 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma14g20193 Gene Call Version Wm82.a1.v1.1

Corresponding Name	Annotation Version	Evidence	Comments

References for Glyma14g20193

Schmutz et al. 2010
Genome sequence of the palaeopolyploid soybean
Nature 2010, 463:178-183

Coding sequences of Glyma14g20193

Limit To All Plant Sequences

>Glyma14g20193.1   sequence type=CDS   gene model=Glyma14g20193   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGAAAGCAAAAACTTCACTGCACAATGGCAACCCTTCACCATCAGAAGTGAAGGCTTGGGGCCTATACCAGGCGATCGCATGGATTCATGATCTTGGATATCACAATGTAATTTTTGAAGTTGACTCAAAAATGGTAACTAATAGTTTCAACAATAAAGTAGATGCTCTCTTTGAGTTTCATGTCATTTTATCAAATTGTAGAGATAAAATTCAAAATATCACAAACTCAAGGATACGATTTTCGGCAACAGTGCACCTTTCGCGCCACAATCTCGATTGCTCCTCCACTATCACTGGCAAGCGATTACCATCTACCACCACCAAAAACATCGTTGTTACCCACTAA

Predicted protein sequences of Glyma14g20193

Limit To All Plant Sequences

>Glyma14g20193.1   sequence type=predicted peptide   gene model=Glyma14g20193   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MKAKTSLHNGNPSPSEVKAWGLYQAIAWIHDLGYHNVIFEVDSKMVTNSFNNKVDALFEFHVILSNCRDKIQNITNSRIRFSATVHLSRHNLDCSSTITGKRLPSTTTKNIVVTH*

Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA

U.S. Public Domain