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Report for Sequence Feature Glyma14g19740

Feature Type:gene_model
Chromosome:Gm14
Start:22476493
stop:22476909
Source:JGI
Version:Wm82.a1.v1.1
High confidence:yes



A newer version of this gene model can be found here:

Annotations for Glyma14g19740
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT4G27090AT Annotation by Michelle Graham. TAIR10: Ribosomal protein L14 | chr4:13594104-13595187 REVERSE LENGTH=134 SoyBaseE_val: 5.00E-15ISS
GO:0001510GO-bp Annotation by Michelle Graham. GO Biological Process: RNA methylation SoyBaseN/AISS
GO:0006412GO-bp Annotation by Michelle Graham. GO Biological Process: translation SoyBaseN/AISS
GO:0042254GO-bp Annotation by Michelle Graham. GO Biological Process: ribosome biogenesis SoyBaseN/AISS
GO:0005622GO-cc Annotation by Michelle Graham. GO Cellular Compartment: intracellular SoyBaseN/AISS
GO:0005730GO-cc Annotation by Michelle Graham. GO Cellular Compartment: nucleolus SoyBaseN/AISS
GO:0005737GO-cc Annotation by Michelle Graham. GO Cellular Compartment: cytoplasm SoyBaseN/AISS
GO:0005773GO-cc Annotation by Michelle Graham. GO Cellular Compartment: vacuole SoyBaseN/AISS
GO:0005774GO-cc Annotation by Michelle Graham. GO Cellular Compartment: vacuolar membrane SoyBaseN/AISS
GO:0005783GO-cc Annotation by Michelle Graham. GO Cellular Compartment: endoplasmic reticulum SoyBaseN/AISS
GO:0005829GO-cc Annotation by Michelle Graham. GO Cellular Compartment: cytosol SoyBaseN/AISS
GO:0005840GO-cc Annotation by Michelle Graham. GO Cellular Compartment: ribosome SoyBaseN/AISS
GO:0009506GO-cc Annotation by Michelle Graham. GO Cellular Compartment: plasmodesma SoyBaseN/AISS
GO:0009507GO-cc Annotation by Michelle Graham. GO Cellular Compartment: chloroplast SoyBaseN/AISS
GO:0022625GO-cc Annotation by Michelle Graham. GO Cellular Compartment: cytosolic large ribosomal subunit SoyBaseN/AISS
GO:0022626GO-cc Annotation by Michelle Graham. GO Cellular Compartment: cytosolic ribosome SoyBaseN/AISS
GO:0003735GO-mf Annotation by Michelle Graham. GO Molecular Function: structural constituent of ribosome SoyBaseN/AISS
PTHR11127Panther 60S RIBOSOMAL PROTEIN L14 JGI ISS
UniRef100_I1JB72UniRef Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1JB72_SOYBN SoyBaseE_val: 2.00E-17ISS
UniRef100_Q3HVK7UniRef Annotation by Michelle Graham. Most informative UniRef hit: Glycoprotein-like protein n=1 Tax=Solanum tuberosum RepID=Q3HVK7_SOLTU SoyBaseE_val: 5.00E-15ISS

Expression Patterns of Glyma14g19740
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma14g19740 not represented in the dataset
Glyma14g19740 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma14g19740 Gene Call Version Wm82.a1.v1.1
Corresponding NameAnnotation VersionEvidenceComments
Glyma.14g138900 Wm82.a2.v1IGC As supplied by JGI

References for Glyma14g19740
Schmutz et al. 2010
  Genome sequence of the palaeopolyploid soybean
  Nature 2010, 463:178-183

Coding sequences of Glyma14g19740
>Glyma14g19740.1   sequence type=CDS   gene model=Glyma14g19740   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGCTTTCGCATCGTGCGCCAGCTCGGAGAAGGTGGCTTCGCCTTGATGCATGTACCGTGTCTGCCTCTCTGCAATCTACAGCCAAAATGCCTTTCAAGAGGTATGTTGAGATTGGGAGGGTTGCCCAAATCAACTACGGTAAGGAATATGGCAGGCTCGTTGTCATTGTTGACGTCATTGACCAGAACAGAGTAACTCCCCCACCACCACCCAAAATTAGTTCTTGCTTTGTTGATAATCCTAATAATATTAGGCTCTTGTCAATGCCCCTGTGA
Predicted protein sequences of Glyma14g19740
>Glyma14g19740.1   sequence type=predicted peptide   gene model=Glyma14g19740   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MLSHRAPARRRWLRLDACTVSASLQSTAKMPFKRYVEIGRVAQINYGKEYGRLVVIVDVIDQNRVTPPPPPKISSCFVDNPNNIRLLSMPL*






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