SoyBase
SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research
SoyBase
SoyBase transitions to NEW site on 10/1/2024
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A newer version of this gene model can be found here:
| Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
|---|---|---|---|---|---|
| AT1G80290 | AT | Annotation by Michelle Graham. TAIR10: Nucleotide-diphospho-sugar transferases superfamily protein | chr1:30188585-30189574 FORWARD LENGTH=329 | SoyBase | E_val: 2.00E-104 | ISS |
| GO:0005576 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: extracellular region | SoyBase | N/A | ISS |
| GO:0031227 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: intrinsic to endoplasmic reticulum membrane | SoyBase | N/A | ISS |
| GO:0016757 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: transferase activity, transferring glycosyl groups | SoyBase | N/A | ISS |
| GO:0016758 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: transferase activity, transferring hexosyl groups | SoyBase | N/A | ISS |
| PTHR11062 | Panther | EXOSTOSIN (HEPARAN SULFATE GLYCOSYLTRANSFERASE)-RELATED | JGI | ISS | |
| PTHR11062:SF3 | Panther | EXOSTOSIN-RELATED | JGI | ISS | |
| PF09258 | PFAM | Glycosyl transferase family 64 domain | JGI | ISS | |
| UniRef100_B9SCN4 | UniRef | Annotation by Michelle Graham. Most informative UniRef hit: Transferase, transferring glycosyl groups, putative n=1 Tax=Ricinus communis RepID=B9SCN4_RICCO | SoyBase | E_val: 3.00E-127 | ISS |
| UniRef100_I1MD27 | UniRef | Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1MD27_SOYBN | SoyBase | E_val: 0 | ISS |
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Glyma14g19550 not represented in the dataset |
Glyma14g19550 not represented in the dataset |
| Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
| Corresponding Name | Annotation Version | Evidence | Comments |
|---|---|---|---|
| Glyma.14g138500 | Wm82.a2.v1 | IGC | As supplied by JGI |
| Schmutz et al. 2010 Genome sequence of the palaeopolyploid soybean Nature 2010, 463:178-183 |
>Glyma14g19550.1 sequence type=CDS gene model=Glyma14g19550 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high ATGACTTCACCAGCGACGGCCATCCTCCTCGCCGCAACCCTAATCGGCGTCGTTTCAGCCGCAACAAGACCACCAGACCCACCGGAATGCGTGCCGGAACCCAATCAGAACCTGCAGATCCTCCACCGCGACAAATTCACGGTCCTCATGAACGGCTTCTCGGAGTCCCGCATCCCACTCCTCCAATCCCTGGCCGCTACGTACTCCCTCTCCCCCATCGTGTCCTCCGTGCTCGTCCTCTGGGGCAACCCCGCCACATCGCCACGTGTCCTTCACCGATTGGCCCACAACCTCACCCTCTCTTCTTCCTCCTCAGCACCAATCTCACTTCTCCTCCAACCCTCCACCATCCTCAACAACCGCTTCCTCCTGCGCCCCAACGACATCTCCACCAATGTCGTTTTGGTCTGCGACGACGACGTGGAGGTGGACCCCACAACCTTGGAATTTGCGTTTCGTGTTTGGAGGCAAAACCCGCACCAGTTAGTTGGGCTCTTCGCCCGGTCGCATGATTTCGACCTGGACCGGAAGGAGTGGGCCTACACGGTCCACCCCGACCGGTTCTCCATCGTGCTCACGAAGTTCATGTTGTTAAAGACACGCTACGTGTTCCTCTACACGTGCCGGGGTGGGCCCTGCATGGCGCGCGATATACTGATGAACTTTGTTGTGGCGGAGGAGGCGGAGGTGGGGTCAGTTTTGGTCGGGGCGAAGAGAGTAAGGGATTATGGTGATGCCCGAAATGAAGAGGAGAGTGAAGAAAAAGGAGTGAGTGTGGTGGGGTTGAGTAGTAGGAAAGGGGAGCATAGGAAGAGGAGAGGGTGGTGCATAAGGGAGTTTCATAGGGTGTTGGGGAGAATGCCTTTGAGGTATAGCTATCGGAAGGTGGTGGATTTTGGGGAACAAGGGTTGTGTTTCAAAGGTGTCAAGTTGGTGTATTGTGATCAGATTTTATTGGTGTAG
>Glyma14g19550.1 sequence type=predicted peptide gene model=Glyma14g19550 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high MTSPATAILLAATLIGVVSAATRPPDPPECVPEPNQNLQILHRDKFTVLMNGFSESRIPLLQSLAATYSLSPIVSSVLVLWGNPATSPRVLHRLAHNLTLSSSSSAPISLLLQPSTILNNRFLLRPNDISTNVVLVCDDDVEVDPTTLEFAFRVWRQNPHQLVGLFARSHDFDLDRKEWAYTVHPDRFSIVLTKFMLLKTRYVFLYTCRGGPCMARDILMNFVVAEEAEVGSVLVGAKRVRDYGDARNEEESEEKGVSVVGLSSRKGEHRKRRGWCIREFHRVLGRMPLRYSYRKVVDFGEQGLCFKGVKLVYCDQILLV*
| Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA | ||
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