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Report for Sequence Feature Glyma14g16850

Feature Type:gene_model
Chromosome:Gm14
Start:18344055
stop:18345247
Source:JGI
Version:Wm82.a1.v1.1
High confidence:yes



A newer version of this gene model can be found here:

Annotations for Glyma14g16850
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT3G13070AT Annotation by Michelle Graham. TAIR10: CBS domain-containing protein / transporter associated domain-containing protein | chr3:4191511-4195112 REVERSE LENGTH=661 SoyBaseE_val: 4.00E-61ISS
GO:0008150GO-bp Annotation by Michelle Graham. GO Biological Process: biological process SoyBaseN/AISS
GO:0005886GO-cc Annotation by Michelle Graham. GO Cellular Compartment: plasma membrane SoyBaseN/AISS
GO:0009941GO-cc Annotation by Michelle Graham. GO Cellular Compartment: chloroplast envelope SoyBaseN/AISS
GO:0003674GO-mf Annotation by Michelle Graham. GO Molecular Function: molecular function SoyBaseN/AISS
PTHR22777Panther HEMOLYSIN-RELATED JGI ISS
PF01595PFAM Domain of unknown function DUF21 JGI ISS
UniRef100_B9T467UniRef Annotation by Michelle Graham. Most informative UniRef hit: Magnesium and cobalt efflux protein corC, putative n=1 Tax=Ricinus communis RepID=B9T467_RICCO SoyBaseE_val: 2.00E-59ISS
UniRef100_I1M6I6UniRef Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1M6I6_SOYBN SoyBaseE_val: 2.00E-63ISS

Expression Patterns of Glyma14g16850
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma14g16850 not represented in the dataset
Glyma14g16850 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma14g16850 Gene Call Version Wm82.a1.v1.1
Corresponding NameAnnotation VersionEvidenceComments

References for Glyma14g16850
Schmutz et al. 2010
  Genome sequence of the palaeopolyploid soybean
  Nature 2010, 463:178-183

Coding sequences of Glyma14g16850
>Glyma14g16850.1   sequence type=CDS   gene model=Glyma14g16850   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGTGTAAGGTTCGTGAGTTGGCCGAAAAGGAGCCTGAAAATGGTGTCTTCAGACTACTCCGAAGTGATGTTACTCGGTTCCTTACAACAATACTTATTGGCACAACAGTGGTCAATATTGGGGCAACTGCTTTGGTCACTGAAGCAGCAACTGCTATGTTTGGTGAAGCTGGTATCAGTGCAGCAATAGGAGCGATGACTGTTGCCATTTTGCTTCTCACTGAAATCACTCCAAAAAGCATAGCTGTTCATAATGCCACAAAAGTGTCTCGGTTTGTGGTCAGACCAGTGGCATGGCTTTCCTTGGTGTTGTATCCTGTAGGAAGAATTGTTACTTATCTTTGTAAAATTAAATGCTACTCACACTTTAATGCA
Predicted protein sequences of Glyma14g16850
>Glyma14g16850.1   sequence type=predicted peptide   gene model=Glyma14g16850   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MCKVRELAEKEPENGVFRLLRSDVTRFLTTILIGTTVVNIGATALVTEAATAMFGEAGISAAIGAMTVAILLLTEITPKSIAVHNATKVSRFVVRPVAWLSLVLYPVGRIVTYLCKIKCYSHFNA






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