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Report for Sequence Feature Glyma14g15301

Feature Type:gene_model
Chromosome:Gm14
Start:16249181
stop:16249684
Source:JGI
Version:Wm82.a1.v1.1
High confidence:yes



A newer version of this gene model can be found here:

Annotations for Glyma14g15301
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G11330AT Annotation by Michelle Graham. TAIR10: FAD/NAD(P)-binding oxidoreductase family protein | chr5:3617342-3618861 REVERSE LENGTH=408 SoyBaseE_val: 8.00E-56ISS
GO:0008152GO-bp Annotation by Michelle Graham. GO Biological Process: metabolic process SoyBaseN/AISS
GO:0005739GO-cc Annotation by Michelle Graham. GO Cellular Compartment: mitochondrion SoyBaseN/AISS
GO:0016491GO-mf Annotation by Michelle Graham. GO Molecular Function: oxidoreductase activity SoyBaseN/AISS
PTHR13789Panther MONOOXYGENASE JGI ISS
PTHR13789:SF8Panther gb def: putative monooxygenase [streptomyces coelicolor a3(2)] JGI ISS
UniRef100_G7I6C9UniRef Annotation by Michelle Graham. Most informative UniRef hit: 3-hydroxybenzoate 6-hydroxylase n=1 Tax=Medicago truncatula RepID=G7I6C9_MEDTR SoyBaseE_val: 2.00E-66ISS
UniRef100_I1M9L5UniRef Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1M9L5_SOYBN SoyBaseE_val: 4.00E-105ISS

Expression Patterns of Glyma14g15301
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma14g15301 not represented in the dataset
Glyma14g15301 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma14g15301 Gene Call Version Wm82.a1.v1.1
Corresponding NameAnnotation VersionEvidenceComments
Glyma.14g127300 Wm82.a2.v1IGC As supplied by JGI

References for Glyma14g15301
Schmutz et al. 2010
  Genome sequence of the palaeopolyploid soybean
  Nature 2010, 463:178-183

Coding sequences of Glyma14g15301
>Glyma14g15301.1   sequence type=CDS   gene model=Glyma14g15301   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGAAAGTAAGTAGTGATATGATCCAAAAAATGCACCAAGAAGCAGAAAAAGTTTGGACTCCTGAGTTGTTTAAGGTTTTGAAAGAAACAAAGAAACCCTTCTTAAATGTCATATATGATGGTGAACCCTTAGGAGAGACATTTTGGGACAATGTGGTATTGGTAGGAGATGTTGCTCACCCCACAACCCCTCACTGTCTTAGAAGCACAAACATGTCAATATTAGATGTAGCAGTCTTAGGAAAATGCCTTGAGAAGTTTGGAGCAGAAAAACTGAGATTAGCTTTGGAAGAATATCAGTTCATCAGGCTACCAGTAACTTCCAAGCAAGTTCTTCATGCTCGAGAACCTTTTAACCACAAGTCATCCAAGAAAGAGGATCGTGAGGAACTTCTACAGAGGAACACTCCTTTTTTCAATCATATGCCTTTGATACTTGCTTCAATTCTAGCCTCCACATAA
Predicted protein sequences of Glyma14g15301
>Glyma14g15301.1   sequence type=predicted peptide   gene model=Glyma14g15301   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MKVSSDMIQKMHQEAEKVWTPELFKVLKETKKPFLNVIYDGEPLGETFWDNVVLVGDVAHPTTPHCLRSTNMSILDVAVLGKCLEKFGAEKLRLALEEYQFIRLPVTSKQVLHAREPFNHKSSKKEDREELLQRNTPFFNHMPLILASILAST*






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