Report for Sequence Feature Glyma14g15270
Feature Type: gene_model
Chromosome: Gm14
Start: 16148216
stop: 16156182
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma14g15270
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT5G11350 AT
Annotation by Michelle Graham. TAIR10: DNAse I-like superfamily protein | chr5:3621583-3625412 FORWARD LENGTH=754
SoyBase E_val: 3.00E-128 ISS
GO:0008150 GO-bp
Annotation by Michelle Graham. GO Biological Process: biological process
SoyBase N/A ISS
GO:0005737 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: cytoplasm
SoyBase N/A ISS
GO:0003824 GO-mf
Annotation by Michelle Graham. GO Molecular Function: catalytic activity
SoyBase N/A ISS
KOG2338
KOG
Transcriptional effector CCR4-related protein
JGI ISS
PTHR12121 Panther
CARBON CATABOLITE REPRESSOR PROTEIN 4
JGI ISS
PTHR12121:SF9 Panther
CARBON CATABOLITE REPRESSOR PROTEIN 4-RELATED
JGI ISS
PF03372 PFAM
Endonuclease/Exonuclease/phosphatase family
JGI ISS
UniRef100_G7I6D2 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: Carbon catabolite repressor protein-like protein n=1 Tax=Medicago truncatula RepID=G7I6D2_MEDTR
SoyBase E_val: 0 ISS
UniRef100_I1M9L4 UniRef
Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1M9L4_SOYBN
SoyBase E_val: 0 ISS
Expression Patterns of Glyma14g15270
Gene expression representations made with eFP at the University of Toronto. Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE Gene model name correspondences to Glyma14g15270 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.14g126800 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma14g15270
Coding sequences of Glyma14g15270
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma14g15270.1 sequence type=CDS gene model=Glyma14g15270 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGCGACGCACTCCTCCCACCATCCATTTCATCGCCGCCACCGACACCGCCGCAGCCACCGCCACCTCAATGTCTTCACGCCCACTTCACCGAGGACGCGGCAGAGGCTTCTCCGGCCGCCCCTACTCCGGCGACGCGCACTTACGCTCCGTCCGCGACGCCAATTTAGGACTCCGCCGTGGCGAGGGCGGAAGCTTCCTGAACCAAACGCCGCACCATCAGAATCCGCCTTACAATCCGAGGCCTCATCCGCCGCCGCCGCCTCACCATCATCGGCCTCAGTTCCGTCCATATCCGCCTCAGTTCCGTCCGCCTCCGCCGCAGTTTCGTCCGCATCCGATGCAATTTCGTCCGCCTCCGCCGTCTGATCACCGGCCGGCGTTTCGTCCGCCGCAGCATCTTCGGCCACGACCGCCAGATTATCGAGACTGGGAGCTTGCTTGGACTCCGCCGCCGCCTCCTCATTGTGAGCGGTTTAAAGTTCTTTCCTATAATATATTGGCTGACTACCTGGCTTTGGACCACCGGACCAAACTCTATTTTCACATACCTCGACACATTTTGGACTGGCAGTGGAGAAAGAGAAGCATAATTTTTGAGCTGGGGTTGTGGTCTGCTGATATCTTGTGTTTACAGGAGGTTGATAGATTTCATGAGTTGGAAGAGGAGTTGAAGCCTAAGGGATATAGCGGCATCTGGAAGATGCGTACAGGTAATCCAGTTGATGGCTGTGCAATCTTTTGGCGTAACTCAAGGTTCAAACTGTTATACGAAGAATGCATTGAGTTTAATAAGCTGGGACTCAGGGATAATGTTGCTCAACTATGTGTACTAGAATTCATTAATCAAAATGGATCTCTCCCATCCAGCTTGACAGGGTCTAGTAAAGTTGTGGTTTGCAACATTCATGTGCTTTACAATCCTAACAGGGGAGAAATTAAGCTTGGCCAGGTTCGAGTGCTGCTTGATAAGGCTAAAGCCGTTTCTAAACTCTGGAATGATGCCCCTGTAGCTATCTGTGGGGATTTTAATTGTACTCCCAAGAGTCCATTATATAACTTTATATCAGAACAGAAGTTAGATCTGTCCGGAATAGATAGGAATAAGGTATCAGGACAAGCTTCTGCTACAATTCATGCATCAAAGCTCTATTATGGTCCTAATTCTAGTGAAATATCTGCTAATGGTTCAGTTCAGGCAACATCCACTGAAGGTGACAAAGAAGACATTGAACAAAATAATTCTCGGTTGGACACGAGGGACCTGGACACTAAATGTCACAGTTTGGATAATCAACATACTCAGACTGTTTCAGATATGTCTGTTAACTCTTGTACAAATGTTGATTGTGGAAAGGAAAGTGATGCATATGCAGGAAAAGATACTCAGGAAACTTCTGTTGACCATTCTAAGGTCTCTTGTGAAGTTGGTAGCATAAAAGAACCTAATCCTTCTTATAGTGAAGGTAGGATCCATATTGATCATGTAAATGGTGACATTCATGACATTACACCCGTGACCTTCTCAGCTCCTGAAGAAGTTCACAGTGATGCAACTTGGCTTGGCAGCAATGAACATATACCAAATGCTGTCCCAACTTCAAATAAAGAATTATTAATTGAAGAATCCAACTTGCATGTGCCTGAAGGGAATAAACATGTGGAGTTTGACTGTGCCCCAACCTCTCTCCAGGAAGATGATCAATCTTCCAAGATGAGGATTGATCTTGAGTCGATAGATCTAGACAATATAGAAATTTCTTCAACTAAACCATCCAGCCAGACTTCAGTTTCATGTGTATTTGAAGATGAAGATAGTCCATCTCATGAAGAAATTGATAATGACCAAAATAACAGCTCATCAACTTCATATCTAGTTGACAAATTACATCACTTGTCCAACATTACCTTTCCACCAGACATGAAAGAGAAATCATTCTTTGATGAGATGGATAAAACCATTATAGGTGGTGAAAGTGAAGATGGCAGCCGTTTTGTATCTTCCTTGCATAATGCTGGAGAAGTGGCTTTTGATCTTGGCTCATCAATGAAATCAGATCTTGAAAAGCCATATCAATCTGAGGAATTAGATTCTGCTTCCAACAACTTGTTGCTGCCCGTAGAAAGCATTGAAATGGAGGATTACTTATCTCCAAGGCAGATTTCTGAATCCATTAATTCAGAGCAAGCTACTTATACTCCAGCATTGTGGACTCCTATGGAGATAGAAACTGCAACAGGAAATGCAGACTGCACCTTCTTGGAGCACCCTTTACAGCTTAGGAGCACATATACTGAAGCTATGGATTGTTCAGGGACTAGAGACCCCCATGGAGAGCCTCTGGTAACCAGTTATAATAGACGCTTCTTGGGAACTGTTGACTACATTTGGCGGTCTGAAGGTCTTCAAACAACCAGAGTTCTTGCTCCGATATCTAAACATGCCATGCAATGGACTCCGGGTTTCCCAACTAAGAAATGGGGTAGTGATCATATTGCATTGGTTACCGAGTTGGCTTTCTTGAAAGACAGTACCGACACTAGCAACGATGTTAAATAG
Predicted protein sequences of Glyma14g15270
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma14g15270.1 sequence type=predicted peptide gene model=Glyma14g15270 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MRRTPPTIHFIAATDTAAATATSMSSRPLHRGRGRGFSGRPYSGDAHLRSVRDANLGLRRGEGGSFLNQTPHHQNPPYNPRPHPPPPPHHHRPQFRPYPPQFRPPPPQFRPHPMQFRPPPPSDHRPAFRPPQHLRPRPPDYRDWELAWTPPPPPHCERFKVLSYNILADYLALDHRTKLYFHIPRHILDWQWRKRSIIFELGLWSADILCLQEVDRFHELEEELKPKGYSGIWKMRTGNPVDGCAIFWRNSRFKLLYEECIEFNKLGLRDNVAQLCVLEFINQNGSLPSSLTGSSKVVVCNIHVLYNPNRGEIKLGQVRVLLDKAKAVSKLWNDAPVAICGDFNCTPKSPLYNFISEQKLDLSGIDRNKVSGQASATIHASKLYYGPNSSEISANGSVQATSTEGDKEDIEQNNSRLDTRDLDTKCHSLDNQHTQTVSDMSVNSCTNVDCGKESDAYAGKDTQETSVDHSKVSCEVGSIKEPNPSYSEGRIHIDHVNGDIHDITPVTFSAPEEVHSDATWLGSNEHIPNAVPTSNKELLIEESNLHVPEGNKHVEFDCAPTSLQEDDQSSKMRIDLESIDLDNIEISSTKPSSQTSVSCVFEDEDSPSHEEIDNDQNNSSSTSYLVDKLHHLSNITFPPDMKEKSFFDEMDKTIIGGESEDGSRFVSSLHNAGEVAFDLGSSMKSDLEKPYQSEELDSASNNLLLPVESIEMEDYLSPRQISESINSEQATYTPALWTPMEIETATGNADCTFLEHPLQLRSTYTEAMDCSGTRDPHGEPLVTSYNRRFLGTVDYIWRSEGLQTTRVLAPISKHAMQWTPGFPTKKWGSDHIALVTELAFLKDSTDTSNDVK*
SoyBase
SoyBase transitions to NEW site on 10/1/2024
