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Report for Sequence Feature Glyma14g14990

Feature Type:gene_model
Chromosome:Gm14
Start:15731826
stop:15742829
Source:JGI
Version:Wm82.a1.v1.1
High confidence:yes



A newer version of this gene model can be found here:

Annotations for Glyma14g14990
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT2G35690AT Annotation by Michelle Graham. TAIR10: acyl-CoA oxidase 5 | chr2:14999962-15002892 FORWARD LENGTH=664 SoyBaseE_val: 0ISS
GO:0001676GO-bp Annotation by Michelle Graham. GO Biological Process: long-chain fatty acid metabolic process SoyBaseN/AISS
GO:0002213GO-bp Annotation by Michelle Graham. GO Biological Process: defense response to insect SoyBaseN/AISS
GO:0006631GO-bp Annotation by Michelle Graham. GO Biological Process: fatty acid metabolic process SoyBaseN/AISS
GO:0006633GO-bp Annotation by Michelle Graham. GO Biological Process: fatty acid biosynthetic process SoyBaseN/AISS
GO:0006635GO-bp Annotation by Michelle Graham. GO Biological Process: fatty acid beta-oxidation SoyBaseN/AISS
GO:0008152GO-bp Annotation by Michelle Graham. GO Biological Process: metabolic process SoyBaseN/AISS
GO:0009555GO-bp Annotation by Michelle Graham. GO Biological Process: pollen development SoyBaseN/AISS
GO:0009695GO-bp Annotation by Michelle Graham. GO Biological Process: jasmonic acid biosynthetic process SoyBaseN/AISS
GO:0055114GO-bp Annotation by Michelle Graham. GO Biological Process: oxidation-reduction process SoyBaseN/AISS
GO:0005777GO-cc Annotation by Michelle Graham. GO Cellular Compartment: peroxisome SoyBaseN/AISS
GO:0003995GO-mf Annotation by Michelle Graham. GO Molecular Function: acyl-CoA dehydrogenase activity SoyBaseN/AISS
GO:0003997GO-mf Annotation by Michelle Graham. GO Molecular Function: acyl-CoA oxidase activity SoyBaseN/AISS
GO:0016627GO-mf Annotation by Michelle Graham. GO Molecular Function: oxidoreductase activity, acting on the CH-CH group of donors SoyBaseN/AISS
GO:0050660GO-mf Annotation by Michelle Graham. GO Molecular Function: flavin adenine dinucleotide binding SoyBaseN/AISS
PTHR10909Panther ELECTRON TRANSPORT OXIDOREDUCTASE JGI ISS
PTHR10909:SF11Panther gb def: mupu [pseudomonas fluorescens] JGI ISS
PF02770PFAM Acyl-CoA dehydrogenase, middle domain JGI ISS
UniRef100_I1LGS5UniRef Annotation by Michelle Graham. Most informative UniRef hit: Acyl-coenzyme A oxidase n=1 Tax=Glycine max RepID=I1LGS5_SOYBN SoyBaseE_val: 0ISS
UniRef100_I1M9K4UniRef Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein (Fragment) n=2 Tax=Glycine max RepID=I1M9K4_SOYBN SoyBaseE_val: 0ISS

Expression Patterns of Glyma14g14990
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma14g14990 Gene Call Version Wm82.a1.v1.1
Corresponding NameAnnotation VersionEvidenceComments
Glyma.14g125300 Wm82.a2.v1IGC As supplied by JGI

References for Glyma14g14990
Schmutz et al. 2010
  Genome sequence of the palaeopolyploid soybean
  Nature 2010, 463:178-183

Coding sequences of Glyma14g14990
>Glyma14g14990.1   sequence type=CDS   gene model=Glyma14g14990   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGCGTTCAGAAAGGATGATAGAGCCACACTTGATAGGAAGGAGTTGTTTAAAAACACCTTGAGAAAAGCAGCTTATGCATGGAAAAGGATCAACGAGCTCCGTCTTAATGAACAGGAAGCTTATAAGCTCAGATCTTTTGTGGATCAAGCTGCATTTACAGATCTTCATTGGGGAATGTTTGTGCCTGCTATCCAAGGACAAGGCACTGACGAACAGCAGCAGAAGTGGTTGCCTCTAGCTTATAGGATGCAAATAATTGGTTGCTATGCCCAAACTGAACTGGGTCATGGGTCCAATGTTCAAGGGCTAGAAACAACTGCAACGTTTGATCCCAAAACAGACGAATTTGTTATCCATAGCCCCACATTGACTTCCAGCAAATGGTGGCCTGGTGGATTGGGTAAAATATCCACCCATGCTGTTGCTTATGCCCGTCTAATTATTGGTGGTGAAGACCATGGAGTGCATGGTTTCATCGTCCAGCTGCGGAGCTTGGATGATCACTTGCCTCTTCCAGGCATAACTATTGGTGATATTGGGATGAAATTTGGAAATGCAGCATATAACACCATGGACAATGGAGTTCTAAGATTTGACCATGTACGAATTCCAAGGAATCAAATGTTAATGAGGGTTTCACAGGTTACCAGAGAAGGAAAATATGTACGCTCAAATGTTCCAAGACAATTAGTTTATGGTACTATGGTAAATGTGAGACAGAAAATCGTAGCTGATGCATCAGTTGCTTTGTCTCGAGCAGTTTGCATTGCTACAAGATATAGTGCTGTTAGAAGACAGTTTGGATCACATAATGGAGGTCTAGAAACACAGGTGATTGATTACAAAACACAGCAGGCTAGGCTCTTCCCTTTGCTGGCTTCTGCTTATGCTTTCAGATTTGTGGGTGGGTGGCTGAAATGGCTTTATATGGATGTGACGGAAAGATTGCAAGCTAATGATTTTTCAACATTGCCTGAGGCTCATGCATGCACTGCTGGATTGAAATCCTTGACTACTACGGCAACTGCTGATGGAATTGAAGAATGCCGTAAACTATGTGGTGGTCATGGTTACCTTTGTAGCAGTGGTCTCCCTGAGTTATTTGCTGTTTATGTTCCTGCCTGCACGTATGAAGGAGACAATATTGTGCTTCTTTTACAGGTGGCAAGGCATCTCGTGAAGACTGTTTCTCAGCTGGACTCTGGAAATAAGCCTGTTGGTACTACAGCTTATATGGCTCGAGTGGAACAACTGATGCAATATCACTCTAATGTTGAAAAGGCTGAGGATTGGTTGAAGCCTAATGTAGTGTTAGAAGCATTTGAAGCTAGGGCTGCTAGGATGTCAGTTGCTTGTGCTCAAAATCTTAGCAAGTTTGCTAACCCTGAACAGGGTAAATGCTTCAATCTTGTTTAG
Predicted protein sequences of Glyma14g14990
>Glyma14g14990.1   sequence type=predicted peptide   gene model=Glyma14g14990   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MAFRKDDRATLDRKELFKNTLRKAAYAWKRINELRLNEQEAYKLRSFVDQAAFTDLHWGMFVPAIQGQGTDEQQQKWLPLAYRMQIIGCYAQTELGHGSNVQGLETTATFDPKTDEFVIHSPTLTSSKWWPGGLGKISTHAVAYARLIIGGEDHGVHGFIVQLRSLDDHLPLPGITIGDIGMKFGNAAYNTMDNGVLRFDHVRIPRNQMLMRVSQVTREGKYVRSNVPRQLVYGTMVNVRQKIVADASVALSRAVCIATRYSAVRRQFGSHNGGLETQVIDYKTQQARLFPLLASAYAFRFVGGWLKWLYMDVTERLQANDFSTLPEAHACTAGLKSLTTTATADGIEECRKLCGGHGYLCSSGLPELFAVYVPACTYEGDNIVLLLQVARHLVKTVSQLDSGNKPVGTTAYMARVEQLMQYHSNVEKAEDWLKPNVVLEAFEARAARMSVACAQNLSKFANPEQGKCFNLV*






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