Glyma14g14290 - SoyBase

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Report for Sequence Feature Glyma14g14290

Feature Type:	gene_model
Chromosome:	Gm14
Start:	14090216
stop:	14093436
Source:	JGI
Version:	Wm82.a1.v1.1
High confidence:	yes

A newer version of this gene model can be found here:

Annotations for Glyma14g14290

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT4G32190	AT	Annotation by Michelle Graham. TAIR10: Myosin heavy chain-related protein \| chr4:15545052-15547689 FORWARD LENGTH=783	SoyBase	E_val: 8.00E-174	ISS
GO:0000302	GO-bp	Annotation by Michelle Graham. GO Biological Process: response to reactive oxygen species	SoyBase	N/A	ISS
GO:0010039	GO-bp	Annotation by Michelle Graham. GO Biological Process: response to iron ion	SoyBase	N/A	ISS
GO:0055072	GO-bp	Annotation by Michelle Graham. GO Biological Process: iron ion homeostasis	SoyBase	N/A	ISS
UniRef100_B9RP29	UniRef	Annotation by Michelle Graham. Most informative UniRef hit: Ubiquitin-protein ligase BRE1A, putative n=1 Tax=Ricinus communis RepID=B9RP29_RICCO	SoyBase	E_val: 0	ISS
UniRef100_UPI000233DF30	UniRef	Annotation by Michelle Graham. Best UniRef hit: UPI000233DF30 related cluster n=1 Tax=unknown RepID=UPI000233DF30	SoyBase	E_val: 0	ISS

Expression Patterns of Glyma14g14290

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology


Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Paralogs of Glyma14g14290

Paralog	Evidence	Comments
Glyma17g32070	IGC	Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.3.

Gene model name correspondences to Glyma14g14290 Gene Call Version Wm82.a1.v1.1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma.14g115900	Wm82.a2.v1	IGC	As supplied by JGI

References for Glyma14g14290

Schmutz et al. 2010
Genome sequence of the palaeopolyploid soybean
Nature 2010, 463:178-183

Transcripts of Glyma14g14290

Limit To All Plant Sequences

>Glyma14g14290.3   sequence type=transcript   gene model=Glyma14g14290   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
GTTGTTTTGATGCTTTATTACAAGTAGTTTATTAGTGGCTGAAATAAACCCGTGAGAGGGGATTCCTTTATGTGACGGCGAGGGACACGTCAAGTTTCTCGTTTTCTTTATCCGATTCCTTTCTGAGCATACAACTACTGCTCGTGTTCGCTCACACCTCTAATCTCTTCACCTACTTGCTCATTAGTCAAACACTTTTCCCTCCATTCCAATCATTTTCTTTTCCTCCATATATAATAATAATCCTTCGCTTTTTTTTTTTTTTTCTCTTCTTCTTCGATCGCATTGAAACCTTGTTCGTTGTAGCTATGTTCTTCTCCACAGCTTCAACGAACAACGCTTGATGGTGAAAAAACCTTCAATCGCCTATTAACTGCAATGCACCACTCATCATCAACTCATCCATGGCTTTCTCCGCTTTACTTCGCCCTTCCTCTTCTCCTTCTCACTCTCAGTTGTTTTGCTCTGTTAGGTTCAATAGGAGGCATCGTAGTAGTAGCCGGGTAGGTTTCGCGTCGAACGGCAGAAGAAGAGTTCGTCGTTTACGGAACAACAATGATGTGACCGTTAGCGTTAGGTCGGTGTTGAACGACAACAGGCCTAGCGCTAGCGTGAACGACGATTACGGGGCGGCGGAGTCTGCTAGGGTTTTGTTCGAGAGGCTGTTCACGCAGAACCGGATGACCGGAGATGAACCGGATCTTCGGATTCTTGAATCGGATCTCAAGGCGGCACTGGCGGCATTGAAGATGAAGGAGGATCACTTGATGGAAGCGGAGAGGATGGTGTTGTTGGAGAATAGTAAGTTGAAGCTCACGAAGGAGGAGCTGGAGCGGCAAGAGAGTGAAATTGAGGCTGCTAGGGTTAGGTATGAGAAGCTCGAGGAGGAGATGAAGGAGACCACGGTTAAATTGGTTTCTCAGGCGGGACAGATTGAGGAGCTGAAGCTTAGGGTTAGGGATCGCGATAGCGAGATCAATGCAGTGAAGTATGCGCTGGGGTTGAAGGAGGGTGAAGTGGAGAAAATGAGGGTTGAATTGGAGGAAAGGAGTCGTGAGGCTGTGGATTTTGATAATGAGCTTAGAGAGAAGGGGAGGATTTTAGATGAGGCAAATGAGGTTATGAAGAAACAGGAGGCTGAGCTTGAGGAGCTGAAGAGGGCGGTTCGAGAGAAAGAGAAGGAGATTGAGGTTTTGTTGGTCGAGAGGGAGGTTGAGAGGGAGAAGCTGAGGGTTGCTGAGGCAAATTTGGAGAAGCAGGCAATGGATTGGATGCTGGCGCAGGAGGAGCTTAAGAGGCTGGGAGAGGACGCTACTAGGCATGCTGAGGAGAGTAGTGAGACACTGGAAGATTTCAGGAGGGTGAAGAAGCTTCTCAATGATGTGAGGTCTGAATTGGTTTCGTCTCAACAGGCGTTGGCGTCTTCCAGAAGTAAAATGGAGGAGCAGGAGCGGTTGTTGGAACAGCAGCTGAGTGAGCTTGGGGAGCAGAGGGTAAGTGTGATGTCATACATGGAAAATTTGAAGGATGCACAGATAGAAGTGGAGAGTGAGAGAAAGAAACTCAGGGTTGCAGAGTCTCGTAACAGAGAGCTTGAACGGGATCTGAAGATGGAAAAGGAGCTTATTAGTGAGTTGGAGGAGGAGCTGAAGAAAGAGAGGACTTCTTTGGAGCAGGCAGTCAAAGAAGTGGCTTTTCTTCAAGAGGAATTGGAGAAAAAAAATGCTGAGTTTAGAGAAACAAGTGCTGTTCTTCAGGTCAGAGAGTCAGAGCTTGTTGATGCTAAGCTAGAAATCCAGCGTTTGAAATCTGAAAAGGCTTCTCTTCAGGGTATATTGGAGGAGAAAGACTTGGAGCTTTCCAATGCTAAGAAGATGCTGGGGGAAATTAACCAGGAAATCTCTGATCTTAAGATGCTTATGAACAGTAAAGAAACACAGTTCATTGAAGCAACTAATATGCTAAGGGAGAAAGATGAGCAATTGAAGATGATCCAGAACAAGTTGAATAATACAAACCAGAAAGGCTTTTGAGGCCGAAACTGTGGTAGAAAGAATTTTAGATCTCACAAACAAGTTGGTTGCTTCCATTAAGGATGAAGACATGAACTCGTCAAAACCACTACTAGATGAAATGGGTAATCAACTACTTGAGCAACTATTGGAGCAACCTGCTAATGAATTGAGATGGCAACAGAAAAGACTTGAGAATGAGCTTGAGTTGGCCAAGGTAACCTTAAAAGAAAAGGAGATGGAAGTTCTTGCTGCACAAAGGGCTCTAACAATAAAAGACGAGGAGCTGAAGATGACTCTTGCAAGATTGGACTCAAAAGAGGAAGAGTTGAAAAAAGTAAGGGAAGAGGTGACAGAAGACTCTAATGATCTTAAAAGGCTGTATGCTTTGGCACAGGAGAGAATTGGTGAGAAAAGCTTAGGTGATTTGGCAATTGAGAAGCTTCAGCTTGAGGCAGCTCAGCTTGAAGTTGAAGCTGCCACTAATGCACTACAAAAACTTGCCGAAATGAGTCGACAACTTCTGAATAAGGCTATCCTGAGTGTTGAAGCTGATAACTACATCAGTGTCATGCAAAATAATGCTAATAAAACCCCAGATTCAATCACAGATACCAATAACCCTGAATGTTTCGAAGAGGTAAAAGCAAGAGTTGCTCGCCTCTCAGCTTTGTCTGAGCAGCTTGTGATGGAGGCAGGTATTGTTCCTGCAAACTAAGAGAGAGAGGTAGTGAAGAAAGTTGTGAGGGAGGGTTGGATCATAAAATCTTCCCTTAGTTTGCAAGACATGTACAATGTACAGATAGTGATCACATCTGGTTTTGGTACTTTACTACAAGATATGTAAAATCTCCACTCATTTTATTGTATTAGTTACATTCAGAGTGTATTTGTTTTCGATAACATAAAAATAGAATGGAAAGATTTTGGATTGCTGCTTTACCCTAATCATATCTTAAATCAAATATCTACTCATAAATCCAAGCCCCCCCTCATCTTCCCCTCAAGATTTTGAGTAAAAAGAGTGGC

Coding sequences of Glyma14g14290

Limit To All Plant Sequences

>Glyma14g14290.2   sequence type=CDS   gene model=Glyma14g14290   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGCACCACTCATCATCAACTCATCCATGGCTTTCTCCGCTTTACTTCGCCCTTCCTCTTCTCCTTCTCACTCTCAGGCCTAGCGCTAGCGTGAACGACGATTACGGGGCGGCGGAGTCTGCTAGGGTTTTGTTCGAGAGGCTGTTCACGCAGAACCGGATGACCGGAGATGAACCGGATCTTCGGATTCTTGAATCGGATCTCAAGGCGGCACTGGCGGCATTGAAGATGAAGGAGGATCACTTGATGGAAGCGGAGAGGATGGTGTTGTTGGAGAATAGTAAGTTGAAGCTCACGAAGGAGGAGCTGGAGCGGCAAGAGAGTGAAATTGAGGCTGCTAGGGTTAGGTATGAGAAGCTCGAGGAGGAGATGAAGGAGACCACGGTTAAATTGGTTTCTCAGGCGGGACAGATTGAGGAGCTGAAGCTTAGGGTTAGGGATCGCGATAGCGAGATCAATGCAGTGAAGTATGCGCTGGGGTTGAAGGAGGGTGAAGTGGAGAAAATGAGGGTTGAATTGGAGGAAAGGAGTCGTGAGGCTGTGGATTTTGATAATGAGCTTAGAGAGAAGGGGAGGATTTTAGATGAGGCAAATGAGGTTATGAAGAAACAGGAGGCTGAGCTTGAGGAGCTGAAGAGGGCGGTTCGAGAGAAAGAGAAGGAGATTGAGGTTTTGTTGGTCGAGAGGGAGGTTGAGAGGGAGAAGCTGAGGGTTGCTGAGGCAAATTTGGAGAAGCAGGCAATGGATTGGATGCTGGCGCAGGAGGAGCTTAAGAGGCTGGGAGAGGACGCTACTAGGCATGCTGAGGAGAGTAGTGAGACACTGGAAGATTTCAGGAGGGTGAAGAAGCTTCTCAATGATGTGAGGTCTGAATTGGTTTCGTCTCAACAGGCGTTGGCGTCTTCCAGAAGTAAAATGGAGGAGCAGGAGCGGTTGTTGGAACAGCAGCTGAGTGAGCTTGGGGAGCAGAGGGTAAGTGTGATGTCATACATGGAAAATTTGAAGGATGCACAGATAGAAGTGGAGAGTGAGAGAAAGAAACTCAGGGTTGCAGAGTCTCGTAACAGAGAGCTTGAACGGGATCTGAAGATGGAAAAGGAGCTTATTAGTGAGTTGGAGGAGGAGCTGAAGAAAGAGAGGACTTCTTTGGAGCAGGCAGTCAAAGAAGTGGCTTTTCTTCAAGAGGAATTGGAGAAAAAAAATGCTGAGTTTAGAGAAACAAGTGCTGTTCTTCAGGTCAGAGAGTCAGAGCTTGTTGATGCTAAGCTAGAAATCCAGCGTTTGAAATCTGAAAAGGCTTCTCTTCAGGGTATATTGGAGGAGAAAGACTTGGAGCTTTCCAATGCTAAGAAGATGCTGGGGGAAATTAACCAGGAAATCTCTGATCTTAAGATGCTTATGAACAGTAAAGAAACACAGTTCATTGAAGCAACTAATATGCTAAGGGAGAAAGATGAGCAATTGAAGATGATCCAGAACAAAATTTTAGATCTCACAAACAAGTTGGTTGCTTCCATTAAGGATGAAGACATGAACTCGTCAAAACCACTACTAGATGAAATGGGTAATCAACTACTTGAGCAACTATTGGAGCAACCTGCTAATGAATTGAGATGGCAACAGAAAAGACTTGAGAATGAGCTTGAGTTGGCCAAGGTAACCTTAAAAGAAAAGGAGATGGAAGTTCTTGCTGCACAAAGGGCTCTAACAATAAAAGACGAGGAGCTGAAGATGACTCTTGCAAGATTGGACTCAAAAGAGGAAGAGTTGAAAAAAGTAAGGGAAGAGGTGACAGAAGACTCTAATGATCTTAAAAGGCTGTATGCTTTGGCACAGGAGAGAATTGGTGAGAAAAGCTTAGGTGATTTGGCAATTGAGAAGCTTCAGCTTGAGGCAGCTCAGCTTGAAGTTGAAGCTGCCACTAATGCACTACAAAAACTTGCCGAAATGAGTCGACAACTTCTGAATAAGGCTATCCTGAGTGTTGAAGCTGATAACTACATCAGTGTCATGCAAAATAATGCTAATAAAACCCCAGATTCAATCACAGATACCAATAACCCTGAATGTTTCGAAGAGGTAAAAGCAAGAGTTGCTCGCCTCTCAGCTTTGTCTGAGCAGCTTGTGATGGAGGCAGGTATTGTTCCTGCAAACTAA

>Glyma14g14290.3   sequence type=CDS   gene model=Glyma14g14290   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGCTTTCTCCGCTTTACTTCGCCCTTCCTCTTCTCCTTCTCACTCTCAGTTGTTTTGCTCTGTTAGGTTCAATAGGAGGCATCGTAGTAGTAGCCGGGTAGGTTTCGCGTCGAACGGCAGAAGAAGAGTTCGTCGTTTACGGAACAACAATGATGTGACCGTTAGCGTTAGGTCGGTGTTGAACGACAACAGGCCTAGCGCTAGCGTGAACGACGATTACGGGGCGGCGGAGTCTGCTAGGGTTTTGTTCGAGAGGCTGTTCACGCAGAACCGGATGACCGGAGATGAACCGGATCTTCGGATTCTTGAATCGGATCTCAAGGCGGCACTGGCGGCATTGAAGATGAAGGAGGATCACTTGATGGAAGCGGAGAGGATGGTGTTGTTGGAGAATAGTAAGTTGAAGCTCACGAAGGAGGAGCTGGAGCGGCAAGAGAGTGAAATTGAGGCTGCTAGGGTTAGGTATGAGAAGCTCGAGGAGGAGATGAAGGAGACCACGGTTAAATTGGTTTCTCAGGCGGGACAGATTGAGGAGCTGAAGCTTAGGGTTAGGGATCGCGATAGCGAGATCAATGCAGTGAAGTATGCGCTGGGGTTGAAGGAGGGTGAAGTGGAGAAAATGAGGGTTGAATTGGAGGAAAGGAGTCGTGAGGCTGTGGATTTTGATAATGAGCTTAGAGAGAAGGGGAGGATTTTAGATGAGGCAAATGAGGTTATGAAGAAACAGGAGGCTGAGCTTGAGGAGCTGAAGAGGGCGGTTCGAGAGAAAGAGAAGGAGATTGAGGTTTTGTTGGTCGAGAGGGAGGTTGAGAGGGAGAAGCTGAGGGTTGCTGAGGCAAATTTGGAGAAGCAGGCAATGGATTGGATGCTGGCGCAGGAGGAGCTTAAGAGGCTGGGAGAGGACGCTACTAGGCATGCTGAGGAGAGTAGTGAGACACTGGAAGATTTCAGGAGGGTGAAGAAGCTTCTCAATGATGTGAGGTCTGAATTGGTTTCGTCTCAACAGGCGTTGGCGTCTTCCAGAAGTAAAATGGAGGAGCAGGAGCGGTTGTTGGAACAGCAGCTGAGTGAGCTTGGGGAGCAGAGGGTAAGTGTGATGTCATACATGGAAAATTTGAAGGATGCACAGATAGAAGTGGAGAGTGAGAGAAAGAAACTCAGGGTTGCAGAGTCTCGTAACAGAGAGCTTGAACGGGATCTGAAGATGGAAAAGGAGCTTATTAGTGAGTTGGAGGAGGAGCTGAAGAAAGAGAGGACTTCTTTGGAGCAGGCAGTCAAAGAAGTGGCTTTTCTTCAAGAGGAATTGGAGAAAAAAAATGCTGAGTTTAGAGAAACAAGTGCTGTTCTTCAGGTCAGAGAGTCAGAGCTTGTTGATGCTAAGCTAGAAATCCAGCGTTTGAAATCTGAAAAGGCTTCTCTTCAGGGTATATTGGAGGAGAAAGACTTGGAGCTTTCCAATGCTAAGAAGATGCTGGGGGAAATTAACCAGGAAATCTCTGATCTTAAGATGCTTATGAACAGTAAAGAAACACAGTTCATTGAAGCAACTAATATGCTAAGGGAGAAAGATGAGCAATTGAAGATGATCCAGAACAAGTTGAATAATACAAACCAGAAAGGCTTTTGA

Predicted protein sequences of Glyma14g14290

Limit To All Plant Sequences

>Glyma14g14290.2   sequence type=predicted peptide   gene model=Glyma14g14290   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MHHSSSTHPWLSPLYFALPLLLLTLRPSASVNDDYGAAESARVLFERLFTQNRMTGDEPDLRILESDLKAALAALKMKEDHLMEAERMVLLENSKLKLTKEELERQESEIEAARVRYEKLEEEMKETTVKLVSQAGQIEELKLRVRDRDSEINAVKYALGLKEGEVEKMRVELEERSREAVDFDNELREKGRILDEANEVMKKQEAELEELKRAVREKEKEIEVLLVEREVEREKLRVAEANLEKQAMDWMLAQEELKRLGEDATRHAEESSETLEDFRRVKKLLNDVRSELVSSQQALASSRSKMEEQERLLEQQLSELGEQRVSVMSYMENLKDAQIEVESERKKLRVAESRNRELERDLKMEKELISELEEELKKERTSLEQAVKEVAFLQEELEKKNAEFRETSAVLQVRESELVDAKLEIQRLKSEKASLQGILEEKDLELSNAKKMLGEINQEISDLKMLMNSKETQFIEATNMLREKDEQLKMIQNKILDLTNKLVASIKDEDMNSSKPLLDEMGNQLLEQLLEQPANELRWQQKRLENELELAKVTLKEKEMEVLAAQRALTIKDEELKMTLARLDSKEEELKKVREEVTEDSNDLKRLYALAQERIGEKSLGDLAIEKLQLEAAQLEVEAATNALQKLAEMSRQLLNKAILSVEADNYISVMQNNANKTPDSITDTNNPECFEEVKARVARLSALSEQLVMEAGIVPAN*

>Glyma14g14290.3   sequence type=predicted peptide   gene model=Glyma14g14290   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MAFSALLRPSSSPSHSQLFCSVRFNRRHRSSSRVGFASNGRRRVRRLRNNNDVTVSVRSVLNDNRPSASVNDDYGAAESARVLFERLFTQNRMTGDEPDLRILESDLKAALAALKMKEDHLMEAERMVLLENSKLKLTKEELERQESEIEAARVRYEKLEEEMKETTVKLVSQAGQIEELKLRVRDRDSEINAVKYALGLKEGEVEKMRVELEERSREAVDFDNELREKGRILDEANEVMKKQEAELEELKRAVREKEKEIEVLLVEREVEREKLRVAEANLEKQAMDWMLAQEELKRLGEDATRHAEESSETLEDFRRVKKLLNDVRSELVSSQQALASSRSKMEEQERLLEQQLSELGEQRVSVMSYMENLKDAQIEVESERKKLRVAESRNRELERDLKMEKELISELEEELKKERTSLEQAVKEVAFLQEELEKKNAEFRETSAVLQVRESELVDAKLEIQRLKSEKASLQGILEEKDLELSNAKKMLGEINQEISDLKMLMNSKETQFIEATNMLREKDEQLKMIQNKLNNTNQKGF*

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