Glyma14g14270 - SoyBase

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Report for Sequence Feature Glyma14g14270

Feature Type:	gene_model
Chromosome:	Gm14
Start:	13991899
stop:	13996110
Source:	JGI
Version:	Wm82.a1.v1.1
High confidence:	yes

A newer version of this gene model can be found here:

Annotations for Glyma14g14270

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT5G11160	AT	Annotation by Michelle Graham. TAIR10: adenine phosphoribosyltransferase 5 \| chr5:3550774-3551986 FORWARD LENGTH=191	SoyBase	E_val: 2.00E-96	ISS
GO:0006168	GO-bp	Annotation by Michelle Graham. GO Biological Process: adenine salvage	SoyBase	N/A	ISS
GO:0009061	GO-bp	Annotation by Michelle Graham. GO Biological Process: anaerobic respiration	SoyBase	N/A	ISS
GO:0009116	GO-bp	Annotation by Michelle Graham. GO Biological Process: nucleoside metabolic process	SoyBase	N/A	ISS
GO:0009117	GO-bp	Annotation by Michelle Graham. GO Biological Process: nucleotide metabolic process	SoyBase	N/A	ISS
GO:0005737	GO-cc	Annotation by Michelle Graham. GO Cellular Compartment: cytoplasm	SoyBase	N/A	ISS
GO:0003999	GO-mf	Annotation by Michelle Graham. GO Molecular Function: adenine phosphoribosyltransferase activity	SoyBase	N/A	ISS
KOG1712	KOG	Adenine phosphoribosyl transferases	JGI		ISS
PTHR11776	Panther	PHOSPHORIBOSYLTRANSFERASE	JGI		ISS
PF00156	PFAM	Phosphoribosyl transferase domain	JGI		ISS
UniRef100_B9RP26	UniRef	Annotation by Michelle Graham. Most informative UniRef hit: Adenine phosphoribosyltransferase, putative n=1 Tax=Ricinus communis RepID=B9RP26_RICCO	SoyBase	E_val: 7.00E-103	ISS
UniRef100_UPI00019AA8C6	UniRef	Annotation by Michelle Graham. Best UniRef hit: UPI00019AA8C6 related cluster n=1 Tax=unknown RepID=UPI00019AA8C6	SoyBase	E_val: 5.00E-137	ISS

Expression Patterns of Glyma14g14270

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology


Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Paralogs of Glyma14g14270

Paralog	Evidence	Comments
Glyma17g32080	IGC	Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.3.

Gene model name correspondences to Glyma14g14270 Gene Call Version Wm82.a1.v1.1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma.14g115700	Wm82.a2.v1	IGC	As supplied by JGI

References for Glyma14g14270

Schmutz et al. 2010
Genome sequence of the palaeopolyploid soybean
Nature 2010, 463:178-183

Transcripts of Glyma14g14270

Limit To All Plant Sequences

>Glyma14g14270.2   sequence type=transcript   gene model=Glyma14g14270   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGCTCAAAATTCGCGTCCTCGTACCACTCCCACAACCTTGATTAGTTGTCTTTTAAATGTGTTCTAGGTGTTGTTGGCTCAACCTCAAACAAAGTTTGTAGCCCCACACATCAACCTCAAAGTCCTTAATATTAACACGACAAAACACATAATAATAGTAGTTTCTTGCAATTACTTGCATAAAAAATTGTTCTGGTAACACTTTTCTCACACACAGAACATGTTTGTCCTAGAAAATGGTGCGAAGAAGAAGGGGGAAGACCCAAGGCTTCAAGCAATCTCCCAAGCCATCAGAGTGGTGCCTCACTTCCCCAAACAAGGAATAATGTTTCAAGACATAACAACATTGCTGTTGGATCACAGCGCGTTTAAAGACGTGGTTGACATTTTTGTTGATCGTTACAGAGACATGGATATTTCTGTTGTTGCCGGAGTTGAAGCCAGGGGATTCATTTTTGGTTCCTCAATTGCGTTAGGCATTGGTGCCAAGTTTGTTCCTTTATGCAAACCTGGAAAGCTACCAGGTGAAGTAATTTCAGAAAAATATGTTCTAGAATATGGAACTGATTGCTTGGAGATGCATGTTGGCGCTGTCCAACACAATGAACGGGTCATAATTATCGATGATTTGGTGGCTACAGAACGTGCTGATGCTGAAGTAGTGGAGTGTGCTTGTGTGATTGGTCTCTCTGATCTCAAGGTACGCAGCAAACTTAATGGAAAGCCACTTTATATCCTTGTGGAGCCACGTCAAGTAGAAAATGGTTTTTGAGGTTGAAATTCAAATTGTACACTACACATGAAGAAATGGTTGCATATAAATGACCCTTTGGAGAACTCTACAATTGTATTTTGTTTGGAGTCTCACAATGAGAACACTCAAGATTTCAAACATCCTTACCCAATGGAGGCACCATTTTGCTAATTTAGAGACATTTTAATATGTCGTGTGAGTATATATATATATATAAGATTATACTTCTTTTTGGGGTGTTTCCCATTACAGTCTCCCTAAGAGAATTATGTTCAACATAGTAAAACACATTAAATATGAACATCTTTTATA

>Glyma14g14270.3   sequence type=transcript   gene model=Glyma14g14270   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGCTCAAAATTCGCGTCCTCGTACCACTCCCACAACCTTGATTAGTTGTCTTTTAAATGTGTTCTAGGTGTTGTTGGCTCAACCTCAAACAAAGTTTGTAGCCCCACACATCAACCTCAAAGTCCTTAATATTAACACGACAAAACACATAATAATAGTAGTTTCTTGCAATTACTTGCATAAAAAATTGTTCTGGTAACACTTTTCTCACACACAGAACATGTTTGTCCTAGAAAATGGTGCGAAGAAGAAGGGGGAAGACCCAAGGCTTCAAGCAATCTCCCAAGCCATCAGAGTGGTGCCTCACTTCCCCAAACAAGGAATAATGTTTCAAGACATAACAACATTGCTGTTGGATCACAGCGCGTTTAAAGACGTGGTTGACATTTTTGTTGATCGTTACAGAGACATGGATATTTCTGTTGTTGCCGGAGTTGAAGCCAGGGGATTCATTTTTGGTTCCTCAATTGCGTTAGGCATTGGTGCCAAGTTTGTTCCTTTATGCAAACCTGGAAAGCTACCAGGTGAAGTAATTTCAGAAAAATATGTTCTAGAATATGGAACTGATTGCTTGGAGATGCATGTTGGCGCTGTCCAACACAATGAACGGGTCATAATTATCGATGATTTGGTGGCTACAGAACGTGCTGATGCTGAAGTAGTGGAGTGTGCTTGTGTGATTGGTCTCTCTGATCTCAAGTCCAAGTTCTTCACCAAAAATAATAAAACAGATAAAGGTACGCAGCAAACTTAATGGAAAGCCACTTTATATCCTTGTGGAGCCACGTCAAGTAGAAAATGGTTTTTGAGGTTGAAATTCAAATTGTACACTACACATGAAGAAATGGTTGCATATAAATGACCCTTTGGAGAACTCTACAATTGTATTTTGTTTGGAGTCTCACAATGAGAACACTCAAGATTTCAAACATCCTTACCCAATGGAGGCACCATTTTGCTAATTTAGAGACATTTTAATATGTCGTGTGAGTATATATATATATATAAGATTATACTTCTTTTTGGGGTGTTTCCCATTACAGTCTCCCTAAGAGAATTATGTTCAACATAGTAAAACACATTAAATATGAACATCTTTTATA

>Glyma14g14270.4   sequence type=transcript   gene model=Glyma14g14270   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGCTCAAAATTCGCGTCCTCGTACCACTCCCACAACCTTGATTAGTTGTCTTTTAAATGTGTTCTAGGTGTTGTTGGCTCAACCTCAAACAAAGTTTGTAGCCCCACACATCAACCTCAAAGTCCTTAATATTAACACGACAAAACACATAATAATAGTAGTTTCTTGCAATTACTTGCATAAAAAATTGTTCTGGTAACACTTTTCTCACACACAGAACATGTTTGTCCTAGAAAATGGTGCGAAGAAGAAGGGGGAAGACCCAAGGCTTCAAGCAATCTCCCAAGCCATCAGAGTGGTGCCTCACTTCCCCAAACAAGGAATAATGTTTCAAGACATAACAACATTGCTGTTGGATCACAGCGCGTTTAAAGACGTGGTTGACATTTTTGTTGATCGTTACAGAGACATGGATATTTCTGTTGTTGCCGGAGTTGAAGCCAGGGGATTCATTTTTGGTTCCTCAATTGCGTTAGGCATTGGTGCCAAGTTTGTTCCTTTATGCAAACCTGGAAAGCTACCAGGTGAAGTAATTTCAGAAAAATATGTTCTAGAATATGGAACTGATTGCTTGGAGATGCATGTTGGCGCTGTCCAACACAATGAACGGGTCATAATTATCGATGATTTGGTGGCTACAGGTGGAACTCTGTCAGCAGCAATTATACTTCTAGAACGTGCTGATGCTGAAGTAGTGGAGTGTGCTTGTGTGATTGGTCTCTCTGATCTCAAGTCCAAGTTCTTCACCAAAAATAATAAAACAGATAAAGGTACGCAGCAAACTTAATGGAAAGCCACTTTATATCCTTGTGGAGCCACGTCAAGTAGAAAATGGTTTTTGAGGTTGAAATTCAAATTGTACACTACACATGAAGAAATGGTTGCATATAAATGACCCTTTGGAGAACTCTACAATTGTATTTTGTTTGGAGTCTCACAATGAGAACACTCAAGATTTCAAACATCCTTACCCAATGGAGGCACCATTTTGCTAATTTAGAGACATTTTAATATGTCGTGTGAGTATATATATATATATAAGATTATACTTCTTTTTGGGGTGTTTCCCATTACAGTCTCCCTAAGAGAATTATGTTCAACATAGTAAAACACATTAAATATGAACATCTTTTATA

Coding sequences of Glyma14g14270

Limit To All Plant Sequences

>Glyma14g14270.1   sequence type=CDS   gene model=Glyma14g14270   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGTTTGTCCTAGAAAATGGTGCGAAGAAGAAGGGGGAAGACCCAAGGCTTCAAGCAATCTCCCAAGCCATCAGAGTGGTGCCTCACTTCCCCAAACAAGGAATAATGTTTCAAGACATAACAACATTGCTGTTGGATCACAGCGCGTTTAAAGACGTGGTTGACATTTTTGTTGATCGTTACAGAGACATGGATATTTCTGTTGTTGCCGGAGTTGAAGCCAGGGGATTCATTTTTGGTTCCTCAATTGCGTTAGGCATTGGTGCCAAGTTTGTTCCTTTATGCAAACCTGGAAAGCTACCAGGTGAAGTAATTTCAGAAAAATATGTTCTAGAATATGGAACTGATTGCTTGGAGATGCATGTTGGCGCTGTCCAACACAATGAACGGGTCATAATTATCGATGATTTGGTGGCTACAGGTGGAACTCTGTCAGCAGCAATTATACTTCTAGAACGTGCTGATGCTGAAGTAGTGGAGTGTGCTTGTGTGATTGGTCTCTCTGATCTCAAGGTACGCAGCAAACTTAATGGAAAGCCACTTTATATCCTTGTGGAGCCACGTCAAGTAGAAAATGGTTTTTGA

>Glyma14g14270.2   sequence type=CDS   gene model=Glyma14g14270   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGTTTGTCCTAGAAAATGGTGCGAAGAAGAAGGGGGAAGACCCAAGGCTTCAAGCAATCTCCCAAGCCATCAGAGTGGTGCCTCACTTCCCCAAACAAGGAATAATGTTTCAAGACATAACAACATTGCTGTTGGATCACAGCGCGTTTAAAGACGTGGTTGACATTTTTGTTGATCGTTACAGAGACATGGATATTTCTGTTGTTGCCGGAGTTGAAGCCAGGGGATTCATTTTTGGTTCCTCAATTGCGTTAGGCATTGGTGCCAAGTTTGTTCCTTTATGCAAACCTGGAAAGCTACCAGGTGAAGTAATTTCAGAAAAATATGTTCTAGAATATGGAACTGATTGCTTGGAGATGCATGTTGGCGCTGTCCAACACAATGAACGGGTCATAATTATCGATGATTTGGTGGCTACAGAACGTGCTGATGCTGAAGTAGTGGAGTGTGCTTGTGTGATTGGTCTCTCTGATCTCAAGGTACGCAGCAAACTTAATGGAAAGCCACTTTATATCCTTGTGGAGCCACGTCAAGTAGAAAATGGTTTTTGA

>Glyma14g14270.3   sequence type=CDS   gene model=Glyma14g14270   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGTTTGTCCTAGAAAATGGTGCGAAGAAGAAGGGGGAAGACCCAAGGCTTCAAGCAATCTCCCAAGCCATCAGAGTGGTGCCTCACTTCCCCAAACAAGGAATAATGTTTCAAGACATAACAACATTGCTGTTGGATCACAGCGCGTTTAAAGACGTGGTTGACATTTTTGTTGATCGTTACAGAGACATGGATATTTCTGTTGTTGCCGGAGTTGAAGCCAGGGGATTCATTTTTGGTTCCTCAATTGCGTTAGGCATTGGTGCCAAGTTTGTTCCTTTATGCAAACCTGGAAAGCTACCAGGTGAAGTAATTTCAGAAAAATATGTTCTAGAATATGGAACTGATTGCTTGGAGATGCATGTTGGCGCTGTCCAACACAATGAACGGGTCATAATTATCGATGATTTGGTGGCTACAGAACGTGCTGATGCTGAAGTAGTGGAGTGTGCTTGTGTGATTGGTCTCTCTGATCTCAAGTCCAAGTTCTTCACCAAAAATAATAAAACAGATAAAGGTACGCAGCAAACTTAA

>Glyma14g14270.4   sequence type=CDS   gene model=Glyma14g14270   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGTTTGTCCTAGAAAATGGTGCGAAGAAGAAGGGGGAAGACCCAAGGCTTCAAGCAATCTCCCAAGCCATCAGAGTGGTGCCTCACTTCCCCAAACAAGGAATAATGTTTCAAGACATAACAACATTGCTGTTGGATCACAGCGCGTTTAAAGACGTGGTTGACATTTTTGTTGATCGTTACAGAGACATGGATATTTCTGTTGTTGCCGGAGTTGAAGCCAGGGGATTCATTTTTGGTTCCTCAATTGCGTTAGGCATTGGTGCCAAGTTTGTTCCTTTATGCAAACCTGGAAAGCTACCAGGTGAAGTAATTTCAGAAAAATATGTTCTAGAATATGGAACTGATTGCTTGGAGATGCATGTTGGCGCTGTCCAACACAATGAACGGGTCATAATTATCGATGATTTGGTGGCTACAGGTGGAACTCTGTCAGCAGCAATTATACTTCTAGAACGTGCTGATGCTGAAGTAGTGGAGTGTGCTTGTGTGATTGGTCTCTCTGATCTCAAGTCCAAGTTCTTCACCAAAAATAATAAAACAGATAAAGGTACGCAGCAAACTTAA

Predicted protein sequences of Glyma14g14270

Limit To All Plant Sequences

>Glyma14g14270.1   sequence type=predicted peptide   gene model=Glyma14g14270   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MFVLENGAKKKGEDPRLQAISQAIRVVPHFPKQGIMFQDITTLLLDHSAFKDVVDIFVDRYRDMDISVVAGVEARGFIFGSSIALGIGAKFVPLCKPGKLPGEVISEKYVLEYGTDCLEMHVGAVQHNERVIIIDDLVATGGTLSAAIILLERADAEVVECACVIGLSDLKVRSKLNGKPLYILVEPRQVENGF*

>Glyma14g14270.2   sequence type=predicted peptide   gene model=Glyma14g14270   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MFVLENGAKKKGEDPRLQAISQAIRVVPHFPKQGIMFQDITTLLLDHSAFKDVVDIFVDRYRDMDISVVAGVEARGFIFGSSIALGIGAKFVPLCKPGKLPGEVISEKYVLEYGTDCLEMHVGAVQHNERVIIIDDLVATERADAEVVECACVIGLSDLKVRSKLNGKPLYILVEPRQVENGF*

>Glyma14g14270.3   sequence type=predicted peptide   gene model=Glyma14g14270   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MFVLENGAKKKGEDPRLQAISQAIRVVPHFPKQGIMFQDITTLLLDHSAFKDVVDIFVDRYRDMDISVVAGVEARGFIFGSSIALGIGAKFVPLCKPGKLPGEVISEKYVLEYGTDCLEMHVGAVQHNERVIIIDDLVATERADAEVVECACVIGLSDLKSKFFTKNNKTDKGTQQT*

>Glyma14g14270.4   sequence type=predicted peptide   gene model=Glyma14g14270   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MFVLENGAKKKGEDPRLQAISQAIRVVPHFPKQGIMFQDITTLLLDHSAFKDVVDIFVDRYRDMDISVVAGVEARGFIFGSSIALGIGAKFVPLCKPGKLPGEVISEKYVLEYGTDCLEMHVGAVQHNERVIIIDDLVATGGTLSAAIILLERADAEVVECACVIGLSDLKSKFFTKNNKTDKGTQQT*

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