SoyBase
SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research
SoyBase
SoyBase transitions to NEW site on 10/1/2024
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A newer version of this gene model can be found here:
| Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
|---|---|---|---|---|---|
| AT2G41790 | AT | Annotation by Michelle Graham. TAIR10: Insulinase (Peptidase family M16) family protein | chr2:17429453-17436110 REVERSE LENGTH=970 | SoyBase | E_val: 5.00E-81 | ISS |
| GO:0006508 | GO-bp | Annotation by Michelle Graham. GO Biological Process: proteolysis | SoyBase | N/A | ISS |
| GO:0005737 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: cytoplasm | SoyBase | N/A | ISS |
| GO:0003824 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: catalytic activity | SoyBase | N/A | ISS |
| GO:0004222 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: metalloendopeptidase activity | SoyBase | N/A | ISS |
| GO:0008270 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: zinc ion binding | SoyBase | N/A | ISS |
| GO:0046872 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: metal ion binding | SoyBase | N/A | ISS |
| PTHR11851 | Panther | METALLOPROTEASE | JGI | ISS | |
| PTHR11851:SF97 | Panther | CATALYTIC/ METAL ION BINDING / METALLOENDOPEPTIDAS | JGI | ISS | |
| PF05193 | PFAM | Peptidase M16 inactive domain | JGI | ISS | |
| UniRef100_B9T1F5 | UniRef | Annotation by Michelle Graham. Most informative UniRef hit: Insulin-degrading enzyme, putative n=1 Tax=Ricinus communis RepID=B9T1F5_RICCO | SoyBase | E_val: 1.00E-82 | ISS |
| UniRef100_UPI000233A00A | UniRef | Annotation by Michelle Graham. Best UniRef hit: UPI000233A00A related cluster n=1 Tax=unknown RepID=UPI000233A00A | SoyBase | E_val: 9.00E-111 | ISS |
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Glyma14g13816 not represented in the dataset |
Glyma14g13816 not represented in the dataset |
| Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
| Corresponding Name | Annotation Version | Evidence | Comments |
|---|
| Schmutz et al. 2010 Genome sequence of the palaeopolyploid soybean Nature 2010, 463:178-183 |
>Glyma14g13816.1 sequence type=CDS gene model=Glyma14g13816 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high ATGCATCTAGTTATATACATGAGTCAAAGCCTTGATAAAATTCAAAACCTTGTAGAAGAAAAGTTCCAGGATATTATAAACATCAATAAAAGTTGTTTCCGTGCTCGTGTTCAGCCATGCAAATCAGAGCATTTGTGGATTCTTGTCAAGACTGTCCCAATAAAGCAAGGTCATAAATTGAGAATAGTATGGCCAGTAACCCCTGAAATTCATCATTACATTGAAGGGCCATGCAAGTATCTTGGTCATCTCATTGATCATGAAGGAAAAGGGTCTTTATATTACATCTTGAAAAAAAATGGGTGGAAAAAAATTATATTTGCAGGATGGGCTACGGGCTTGAATGTTGGCGAATCAGATTGGAGTTTGGATTTTTCTTTCTTTAAAGTTGTAATTGATCTTAATGATGCCAGCCATGAGCACGTACAAGATATAATTGGGTTGTTGTTCAAATACATTGAGCTTCCACAATACCTAAAAGTAACTAGTAAGTTAAAAAAACCTAGGGCAAGTGCACTCTTACCATTGCTATCTTCGTTGATGATAGTGAATTTCATCTATGCTTCACATGTGGTAGTAGGCCTACAGTTTGCCATAGGCAAACAATTGAGCTACATTAACTTTGGACTTTCAATGGTTTGTGAGACCAAGTTTTATTATCAGGACAAAATTCGTCCTAGTGATTATGTTGTTAATATTGCATCAAATAAGCAGTTTTATCCTGTAAAAGATTGGTTGACAGGATCATCCTTGCCTTCCAAATTTATCCCAAGTGTTATCCAAATGGTACTAGATTAG
>Glyma14g13816.1 sequence type=predicted peptide gene model=Glyma14g13816 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high MHLVIYMSQSLDKIQNLVEEKFQDIININKSCFRARVQPCKSEHLWILVKTVPIKQGHKLRIVWPVTPEIHHYIEGPCKYLGHLIDHEGKGSLYYILKKNGWKKIIFAGWATGLNVGESDWSLDFSFFKVVIDLNDASHEHVQDIIGLLFKYIELPQYLKVTSKLKKPRASALLPLLSSLMIVNFIYASHVVVGLQFAIGKQLSYINFGLSMVCETKFYYQDKIRPSDYVVNIASNKQFYPVKDWLTGSSLPSKFIPSVIQMVLD*
| Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA | ||
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