Glyma14g13251 - SoyBase

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Report for Sequence Feature Glyma14g13251

Feature Type:	gene_model
Chromosome:	Gm14
Start:	12548553
stop:	12550509
Source:	JGI
Version:	Wm82.a1.v1.1
High confidence:	yes

A newer version of this gene model can be found here:

Annotations for Glyma14g13251

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT3G17030	AT	Annotation by Michelle Graham. TAIR10: Nucleic acid-binding proteins superfamily \| chr3:5804509-5808462 REVERSE LENGTH=668	SoyBase	E_val: 7.00E-17	ISS
GO:0006261	GO-bp	Annotation by Michelle Graham. GO Biological Process: DNA-dependent DNA replication	SoyBase	N/A	ISS
GO:0008150	GO-bp	Annotation by Michelle Graham. GO Biological Process: biological process	SoyBase	N/A	ISS
GO:0009560	GO-bp	Annotation by Michelle Graham. GO Biological Process: embryo sac egg cell differentiation	SoyBase	N/A	ISS
GO:0005634	GO-cc	Annotation by Michelle Graham. GO Cellular Compartment: nucleus	SoyBase	N/A	ISS
UniRef100_C6T2G6	UniRef	Annotation by Michelle Graham. Best UniRef hit: Putative uncharacterized protein n=1 Tax=Glycine max RepID=C6T2G6_SOYBN	SoyBase	E_val: 6.00E-71	ISS
UniRef100_F4J3Z2	UniRef	Annotation by Michelle Graham. Most informative UniRef hit: Nucleic acid-binding-like protein n=1 Tax=Arabidopsis thaliana RepID=F4J3Z2_ARATH	SoyBase	E_val: 3.00E-14	ISS

Expression Patterns of Glyma14g13251

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma14g13251 not represented in the dataset	Glyma14g13251 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma14g13251 Gene Call Version Wm82.a1.v1.1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma.14g110000	Wm82.a2.v1	IGC	As supplied by JGI

References for Glyma14g13251

Schmutz et al. 2010
Genome sequence of the palaeopolyploid soybean
Nature 2010, 463:178-183

Transcripts of Glyma14g13251

Limit To All Plant Sequences

>Glyma14g13251.2   sequence type=transcript   gene model=Glyma14g13251   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
AGAAAAATATATCTTATACTGTACTTGGTAGACAACAATTGGTTGCAAACGGATAAGAAATATGTGTACAGAAATCCTCCCCAGCCACAGCTACTCCTTAGATCTCATCATAAACCCCCCTCTACAGAAACAGAAGCAGAACCCAAGAGCAGAGAAGAATCAGAGAATGGCAACTATGACTGGTGTGAGCCTTTCATGCCCCAGGGTTTTCTTCAACGCATCAGGCTCACCGCAAAACGCGCATGCTTATTGTATTTTGTCCAGCAGATTCTATGACTTGACAGGACTGCAGAATGGAATTCTGAAGCGAGGGAGAGAGATTTTCCTCACTGGTTGCTACCTCCGAACTCCCACTGGAGGTTCTGGACATTCACGTCTTTTGCCAACAGAGTATCTTGTGATTCTATTGGATGAAGTAATGGTCAAAGATTTTTTAATTTTAAATTTGTCCACTGTGAAGTTTAATTGGGCTAACAAGAGGAGTGAGTGAGTAGGCTCAACATACATAAATGCCTGTTAGGAAGTCAAGCCCAATGATTCAATTTAATGAGAGGGACCTCTGAGTATCTTTTTTCTTATCACGTCAATCATCTTGTTTTATATTCTCTCTTTTCATCTTTCTTTATTGCATAACATTTATCACGAAATTTTTGTACCAATACAATTTCTCTTCTAATTTTTTTTAATTAAATAACTTTTATACTTTTGATACAATATTTTTTAAAAATAAAAACTTGATATTTTTGTATTTTTAACATGTGTTGATGATCCATGAGTATACTTAAAATTCAAAAACAAAAGCTCTTTTAGATCTTTTTTGCACTTGGGAGAATTAAACGCAAGAGCTTTGCCTTAATTTGAGCTTCAAGGAATTTCCTACTTCATATTGACTAAAAATAGAATGTTATGTGCTTATTAGGGAAGTCTATTCAAT

>Glyma14g13251.3   sequence type=transcript   gene model=Glyma14g13251   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
AGAAAAATATATCTTATACTGTACTTGGTAGACAACAATTGGTTGCAAACGGATAAGAAATATGTGTACAGAAATCCTCCCCAGCCACAGCTACTCCTTAGATCTCATCATAAACCCCCCTCTACAGAAACAGAAGCAGAACCCAAGAGCAGAGAAGAATCAGAGAATGGCAACTATGACTGGTGTGAGCCTTTCATGCCCCAGGGTTTTCTTCAACGCATCAGGCTCACCGCAAAACGCGCATGCTTATTGTATTTTGTCCAGCAGATTCTATGACTTGACAGGACTGCAGAATGGAATTCTGAAGCGAGGGAGAGAGATTTTCCTCACTGGTTGCTACCTCCGAACTCCCACTGGAGGACTTCCAGAAGGAAATTGTTAAAGCAGCAAAAACATTTACAGCTATAGGTTATAAGCATATTGAAACAGGTGAAGATTAGCTTTTGTTTCTTTTTTCCTTTACTTTGACTAGTCTTTGTATGCAATCACTGTTATTATTTTTTTTTATTGTACAGTAATCATATTGAAGAGTCTACAGAAAAATAAAGTAAGATGAAGTCTTAAAATGACCAAATTTTAAGTGAATGATTAGCTGAGTAAGTAGTTGTTTAAAAAGTTGATAAAGAATTGGTGCTTAAAATATGAAGCAGTAATAGAATCTTTTCAATGACCTACAGAAAGCATACAAAAAAAATTAATAATTCTACATCGGTTATAAACAAAAACCGATGTAGAATGCTAT

>Glyma14g13251.4   sequence type=transcript   gene model=Glyma14g13251   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
AGAAAAATATATCTTATACTGTACTTGGTAGACAACAATTGGTTGCAAACGGATAAGAAATATGTGTACAGAAATCCTCCCCAGCCACAGCTACTCCTTAGATCTCATCATAAACCCCCCTCTACAGAAACAGAAGCAGAACCCAAGAGCAGAGAAGAATCAGAGAATGGCAACTATGACTGGTGTGAGCCTTTCATGCCCCAGGGTTTTCTTCAACGCATCAGGCTCACCGCAAAACGCGCATGCTGTAAAGTTCTCTTTTATTGTATTTTGTCCAGCAGATTCTATGACTTGACAGGACTGCAGAATGGAATTCTGAAGCGAGGGAGAGAGATTTTCCTCACTGGTTGCTACCTCCGAACTCCCACTGGAGGTTCTGGACATTCACGTCTTTTGCCAACAGAGTATCTTGTGATTCTATTGGATGAAGACTTCCAGAAGGAAATTGTTAAAGCAGCAAAAACATTTACAGCTATAGGTTATAAGCATATTGAAACAGGTGAAGATTAGCTTTTGTTTCTTTTTTCCTTTACTTTGACTAGTCTTTGTATGCAATCACTGTTATTATTTTTTTTTATTGTACAGTAATCATATTGAAGAGTCTACAGAAAAATAAAGTAAGATGAAGTCTTAAAATGACCAAATTTTAAGTGAATGATTAGCTGAGTAAGTAGTTGTTTAAAAAGTTGATAAAGAATTGGTGCTTAAAATATGAAGCAGTAATAGAATCTTTTCAATGACCTACAGAAAGCATAC

>Glyma14g13251.5   sequence type=transcript   gene model=Glyma14g13251   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
AGAAAAATATATCTTATACTGTACTTGGTAGACAACAATTGGTTGCAAACGGATAAGAAATATGTGTACAGAAATCCTCCCCAGCCACAGCTACTCCTTAGATCTCATCATAAACCCCCCTCTACAGAAACAGAAGCAGAACCCAAGAGCAGAGAAGAATCAGAGAATGGCAACTATGACTGGTGTGAGCCTTTCATGCCCCAGGGTTTTCTTCAACGCATCAGGCTCACCGCAAAACGCGCATGCTGTAAAGTTCTCTTTTATTGTATTTTGTCCAGCAGATTCTATGACTTGACAGGACTGCAGAATGGAATTCTGAAGCGAGGGAGAGAGATTTTCCTCACTGGTTGCTACCTCCGAACTCCCACTGGAGGTTCTGGACATTCACGTCTTTTGCCAACAGAGTATCTTGTGATTCTATTGGATGAAGTAATGGTCAAAGATTTTTTAATTTTAAATTTGTCCACTGTGAAGTTTAATTGGGCTAACAAGAGGAGTGAGTGAGTAGGCTCAACATACATAAATGCCTGTTAGGAAGTCAAGCCCAATGATTCAATTTAATGAGAGGGACCTCTGAGTATCTTTTTTCTTATCACGTCAATCATCTTGTTTTATATTCTCTCTTTTCATCTTTCTTTATTGCATAACATTTATCACGAAATTTTTGTACCAATACAATTTCTCTTCTAATTTTTTTTAATTAAATAACTTTTATACTTTTGATACAATATTTTTTAAAAATAAAAACTTGATATTTTTGTATTTTTAACATGTGTTGATGATCCATGAGTATACTTAAAATTCAAAAACAAAAGCTCTTTTAGATCTTTTTTGCACTTGGGAGAATTAAACGCAAGAGCTTTGCCTTAATTTGAGCTTCAAGGAATTTCCTACTTCATATTGACTAAAAATAGAATGTTATGTGCTTATTAGGGAAGTCTATTCAAT

Coding sequences of Glyma14g13251

Limit To All Plant Sequences

>Glyma14g13251.1   sequence type=CDS   gene model=Glyma14g13251   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGTGTACAGAAATCCTCCCCAGCCACAGCTACTCCTTAGATCTCATCATAAACCCCCCTCTACAGAAACAGAAGCAGAACCCAAGAGCAGAGAAGAATCAGAGAATGGCAACTATGACTGGTGTGAGCCTTTCATGCCCCAGGGTTTTCTTCAACGCATCAGGCTCACCGCAAAACGCGCATGCTTATTGTATTTTGTCCAGCAGATTCTATGACTTGACAGGACTGCAGAATGGAATTCTGAAGCGAGGGAGAGAGATTTTCCTCACTGGTTGCTACCTCCGAACTCCCACTGGAGGTTCTGGACATTCACGTCTTTTGCCAACAGAGTATCTTGTGATTCTATTGGATGAAGACTTCCAGAAGGAAATTGTTAAAGCAGCAAAAACATTTACAGCTATAGGTTATAAGCATATTGAAACAGGTGAAGATTAG

>Glyma14g13251.2   sequence type=CDS   gene model=Glyma14g13251   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGTGTACAGAAATCCTCCCCAGCCACAGCTACTCCTTAGATCTCATCATAAACCCCCCTCTACAGAAACAGAAGCAGAACCCAAGAGCAGAGAAGAATCAGAGAATGGCAACTATGACTGGTGTGAGCCTTTCATGCCCCAGGGTTTTCTTCAACGCATCAGGCTCACCGCAAAACGCGCATGCTTATTGTATTTTGTCCAGCAGATTCTATGACTTGACAGGACTGCAGAATGGAATTCTGAAGCGAGGGAGAGAGATTTTCCTCACTGGTTGCTACCTCCGAACTCCCACTGGAGGTTCTGGACATTCACGTCTTTTGCCAACAGAGTATCTTGTGATTCTATTGGATGAAGTAATGGTCAAAGATTTTTTAATTTTAAATTTGTCCACTGTGAAGTTTAATTGGGCTAACAAGAGGAGTGAGTGA

>Glyma14g13251.3   sequence type=CDS   gene model=Glyma14g13251   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGTGTACAGAAATCCTCCCCAGCCACAGCTACTCCTTAGATCTCATCATAAACCCCCCTCTACAGAAACAGAAGCAGAACCCAAGAGCAGAGAAGAATCAGAGAATGGCAACTATGACTGGTGTGAGCCTTTCATGCCCCAGGGTTTTCTTCAACGCATCAGGCTCACCGCAAAACGCGCATGCTTATTGTATTTTGTCCAGCAGATTCTATGACTTGACAGGACTGCAGAATGGAATTCTGAAGCGAGGGAGAGAGATTTTCCTCACTGGTTGCTACCTCCGAACTCCCACTGGAGGACTTCCAGAAGGAAATTGTTAA

>Glyma14g13251.4   sequence type=CDS   gene model=Glyma14g13251   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGCCCCAGGGTTTTCTTCAACGCATCAGGCTCACCGCAAAACGCGCATGCTGTAAAGTTCTCTTTTATTGTATTTTGTCCAGCAGATTCTATGACTTGACAGGACTGCAGAATGGAATTCTGAAGCGAGGGAGAGAGATTTTCCTCACTGGTTGCTACCTCCGAACTCCCACTGGAGGTTCTGGACATTCACGTCTTTTGCCAACAGAGTATCTTGTGATTCTATTGGATGAAGACTTCCAGAAGGAAATTGTTAAAGCAGCAAAAACATTTACAGCTATAGGTTATAAGCATATTGAAACAGGTGAAGATTAG

>Glyma14g13251.5   sequence type=CDS   gene model=Glyma14g13251   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGCCCCAGGGTTTTCTTCAACGCATCAGGCTCACCGCAAAACGCGCATGCTGTAAAGTTCTCTTTTATTGTATTTTGTCCAGCAGATTCTATGACTTGACAGGACTGCAGAATGGAATTCTGAAGCGAGGGAGAGAGATTTTCCTCACTGGTTGCTACCTCCGAACTCCCACTGGAGGTTCTGGACATTCACGTCTTTTGCCAACAGAGTATCTTGTGATTCTATTGGATGAAGTAATGGTCAAAGATTTTTTAATTTTAAATTTGTCCACTGTGAAGTTTAATTGGGCTAACAAGAGGAGTGAGTGA

Predicted protein sequences of Glyma14g13251

Limit To All Plant Sequences

>Glyma14g13251.1   sequence type=predicted peptide   gene model=Glyma14g13251   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MCTEILPSHSYSLDLIINPPLQKQKQNPRAEKNQRMATMTGVSLSCPRVFFNASGSPQNAHAYCILSSRFYDLTGLQNGILKRGREIFLTGCYLRTPTGGSGHSRLLPTEYLVILLDEDFQKEIVKAAKTFTAIGYKHIETGED*

>Glyma14g13251.2   sequence type=predicted peptide   gene model=Glyma14g13251   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MCTEILPSHSYSLDLIINPPLQKQKQNPRAEKNQRMATMTGVSLSCPRVFFNASGSPQNAHAYCILSSRFYDLTGLQNGILKRGREIFLTGCYLRTPTGGSGHSRLLPTEYLVILLDEVMVKDFLILNLSTVKFNWANKRSE*

>Glyma14g13251.3   sequence type=predicted peptide   gene model=Glyma14g13251   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MCTEILPSHSYSLDLIINPPLQKQKQNPRAEKNQRMATMTGVSLSCPRVFFNASGSPQNAHAYCILSSRFYDLTGLQNGILKRGREIFLTGCYLRTPTGGLPEGNC*

>Glyma14g13251.4   sequence type=predicted peptide   gene model=Glyma14g13251   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MPQGFLQRIRLTAKRACCKVLFYCILSSRFYDLTGLQNGILKRGREIFLTGCYLRTPTGGSGHSRLLPTEYLVILLDEDFQKEIVKAAKTFTAIGYKHIETGED*

>Glyma14g13251.5   sequence type=predicted peptide   gene model=Glyma14g13251   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MPQGFLQRIRLTAKRACCKVLFYCILSSRFYDLTGLQNGILKRGREIFLTGCYLRTPTGGSGHSRLLPTEYLVILLDEVMVKDFLILNLSTVKFNWANKRSE*

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