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Report for Sequence Feature Glyma14g12770

Feature Type:gene_model
Chromosome:Gm14
Start:11714201
stop:11715222
Source:JGI
Version:Wm82.a1.v1.1
High confidence:yes



A newer version of this gene model can be found here:

Annotations for Glyma14g12770
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G02410AT Annotation by Michelle Graham. TAIR10: cytochrome c oxidase assembly protein CtaG / Cox11 family | chr1:491300-492762 FORWARD LENGTH=287 SoyBaseE_val: 1.00E-14ISS
GO:0008150GO-bp Annotation by Michelle Graham. GO Biological Process: biological process SoyBaseN/AISS
GO:0019243GO-bp Annotation by Michelle Graham. GO Biological Process: methylglyoxal catabolic process to D-lactate SoyBaseN/AISS
GO:0009507GO-cc Annotation by Michelle Graham. GO Cellular Compartment: chloroplast SoyBaseN/AISS
GO:0005507GO-mf Annotation by Michelle Graham. GO Molecular Function: copper ion binding SoyBaseN/AISS
PF04442PFAM Cytochrome c oxidase assembly protein CtaG/Cox11 JGI ISS
UniRef100_B6T5S8UniRef Annotation by Michelle Graham. Most informative UniRef hit: Cytochrome c oxidase assembly protein ctaG n=1 Tax=Zea mays RepID=B6T5S8_MAIZE SoyBaseE_val: 3.00E-12ISS
UniRef100_I1MZH2UniRef Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1MZH2_SOYBN SoyBaseE_val: 1.00E-12ISS

Expression Patterns of Glyma14g12770
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma14g12770 not represented in the dataset
Glyma14g12770 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma14g12770 Gene Call Version Wm82.a1.v1.1
Corresponding NameAnnotation VersionEvidenceComments

References for Glyma14g12770
Schmutz et al. 2010
  Genome sequence of the palaeopolyploid soybean
  Nature 2010, 463:178-183

Coding sequences of Glyma14g12770
>Glyma14g12770.1   sequence type=CDS   gene model=Glyma14g12770   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGACTATCTCTTTATCTAATATTCTGTTTAATCCATATGAAAAAGTTAAAAATGTAATGGTCAAGTCCGGTCAAAGTGCCCTCCCATTTTATACGGTCGAAAACAAAAGTTCTACTCCAATAACAGGTGTTTCTACGTATAATGTCACTCCTATGAAGTTGCAAGTCTTTCATTTTGAACCCAACACCATTACTGTATTTGAAATAATTTTATTCTATGTTGAATCGGAATTTATCTTTATATCTCCTGGAAAATTAGTTTCATCTTATTGTTTTTTTTTCTGTTCA
Predicted protein sequences of Glyma14g12770
>Glyma14g12770.1   sequence type=predicted peptide   gene model=Glyma14g12770   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MTISLSNILFNPYEKVKNVMVKSGQSALPFYTVENKSSTPITGVSTYNVTPMKLQVFHFEPNTITVFEIILFYVESEFIFISPGKLVSSYCFFFCS






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