Report for Sequence Feature Glyma14g11400
Feature Type: gene_model
Chromosome: Gm14
Start: 9921861
stop: 9927299
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma14g11400
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT5G20510 AT
Annotation by Michelle Graham. TAIR10: alfin-like 5 | chr5:6939991-6942846 REVERSE LENGTH=260
SoyBase E_val: 3.00E-128 ISS
GO:0006355 GO-bp
Annotation by Michelle Graham. GO Biological Process: regulation of transcription, DNA-dependent
SoyBase N/A ISS
GO:0005634 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: nucleus
SoyBase N/A ISS
GO:0003677 GO-mf
Annotation by Michelle Graham. GO Molecular Function: DNA binding
SoyBase N/A ISS
GO:0008270 GO-mf
Annotation by Michelle Graham. GO Molecular Function: zinc ion binding
SoyBase N/A ISS
GO:0035064 GO-mf
Annotation by Michelle Graham. GO Molecular Function: methylated histone residue binding
SoyBase N/A ISS
KOG1632
KOG
Uncharacterized PHD Zn-finger protein
JGI ISS
PTHR23123 Panther
PHD/F-BOX CONTAINING PROTEIN
JGI ISS
PF00628 PFAM
PHD-finger
JGI ISS
PF12165 PFAM
Domain of unknown function (DUF3594)
JGI ISS
UniRef100_I1M961 UniRef
Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1M961_SOYBN
SoyBase E_val: 0 ISS
UniRef100_Q06A76 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: PHD4 n=1 Tax=Glycine max RepID=Q06A76_SOYBN
SoyBase E_val: 2.00E-156 ISS
Expression Patterns of Glyma14g11400
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE
Gene model name correspondences to Glyma14g11400 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.14g099700 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma14g11400
Transcripts of Glyma14g11400
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma14g11400.2 sequence type=transcript gene model=Glyma14g11400 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
AAGAAAAAAAGAAGAAGAAAAAAACGTAAGCGGGTTTAAGTGTTGAGTTTGCAACGGACTCGATGGGCTTTATCAAATCCGGTTAATACAATCCAATTCTACTCGATTCAAGTCCGGTTAATAAAAAAGCCTGTGCAGTGCAGTGTGTACTACACTATGTGATGTTGTAGGTGTGTGTGTTGTTGCACACTCTCCACACTTACACAGAGAGAAAAGAGAGAGAAAGAAAAGGATCAAATAGTTAAAACCTTTGGTTCTTTCCCTCCATAGTTCCATTTTTCCATTCAACAACACAACACCTCAGACAGACATCATGGAGGCAGGTTACAATCCTCGTACCGTCGAAGAGGTCTTTAGGGATTTCAAGGGTCGCAGAGCTGCTTTGATTAAAGCCCTCACCACCGAGAAGGAAAATCTTTGCCTTTATGGATTTCCAAGTGAGCAGTGGGAAGTCAATCTGCCAGCTGAGGAGGTGCCCCCTGAGCTTCCAGAGCCAGCATTGGGCATTAACTTTGCCAGAGACGGGATGCAAGAAAAGGACTGGCTGTCTTTGGTTGCTGTACACAGTGATGCTTGGTTGCTTGCTGTGGCTTTTTATTTTGGTGCTAGGTTTGGATTTGACAAGGCTGATAGGAAGCGACTATTTAATATGATAAATGATCTTCCGACAATATTTGAGGTTGTTACAGGGATGGCCAAGAAACAAGGAAAGGAAAAGTCATCAGTTTCAAATCATAGCAGTACCAAATCTAAGTCAAACTCTAAGCGAGGTTCTGAATCAAAGTATACAAAAGCAATGCAATCAAAGGACGAGGATGATGAGGGTGGTGCGGGTTTGGGTTTGGGTTTGGAAGACGAAGACGAAGAGGAACATGGAGATACCTTGTGTGGGGCATGTGGAGAGAGCTATGCTGCTGATGAGTTCTGGATTTGCTGCGACATCTGCGAGAAATGGTTCCATGGAAAGTGCGTGAAGATTACCCCTGCAAGGGCTGAGCATATCAAGCAGTACAAATGTCCTTCTTGCAGCAACAAGCGAGCTCGACCTTGACAAACATGGCTAGGATGGTGGTGACTATAATCTTGGCAATTTTATGACTACTAATTTGTTTAGTAGGTCAAGTTTATTAGTCTTGCTGTGAATTTCAGGTATATTGTTTCAGATGTTACATTAGGTATATTATGAGCTGCTGTCGATTCATCTACCATTAGGATGTTTATTTCATAAGTGGACTTGAATGTTGTTCTGTTATGTGTTTCTTTAAATTTTATGTAGCTGTGTAACTGTGTTGTGTCCATAGCTTATTATCTGCCGTGGTGTAATTCTGCTCTATTTTTTTTTTTTTGGGATACATATATATATTTTTTAATTCAAGTTCTAACTCATGTTAAAGATGGGTGAAACTTGAGACGGGAAGAATCTACTTGATAGTAGAACAATTACTTGCTAGCTTCATTAAATAACACGTTAAAAA
Coding sequences of Glyma14g11400
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma14g11400.1 sequence type=CDS gene model=Glyma14g11400 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGGAGGCAGGTTACAATCCTCGTACCGTCGAAGAGGTCTTTAGGGATTTCAAGGGTCGCAGAGCTGCTTTGATTAAAGCCCTCACCACCGATGTTGAAGAGTTCTACCAGCAGTGCGATCCCGAGAAGGAAAATCTTTGCCTTTATGGATTTCCAAGTGAGCAGTGGGAAGTCAATCTGCCAGCTGAGGAGGTGCCCCCTGAGCTTCCAGAGCCAGCATTGGGCATTAACTTTGCCAGAGACGGGATGCAAGAAAAGGACTGGCTGTCTTTGGTTGCTGTACACAGTGATGCTTGGTTGCTTGCTGTGGCTTTTTATTTTGGTGCTAGGTTTGGATTTGACAAGGCTGATAGGAAGCGACTATTTAATATGATAAATGATCTTCCGACAATATTTGAGGTTGTTACAGGGATGGCCAAGAAACAAGGAAAGGAAAAGTCATCAGTTTCAAATCATAGCAGTACCAAATCTAAGTCAAACTCTAAGCGAGGTTCTGAATCAAAGTATACAAAAGCAATGCAATCAAAGGACGAGGATGATGAGGGTGGTGCGGGTTTGGGTTTGGGTTTGGAAGACGAAGACGAAGAGGAACATGGAGATACCTTGTGTGGGGCATGTGGAGAGAGCTATGCTGCTGATGAGTTCTGGATTTGCTGCGACATCTGCGAGAAATGGTTCCATGGAAAGTGCGTGAAGATTACCCCTGCAAGGGCTGAGCATATCAAGCAGTACAAATGTCCTTCTTGCAGCAACAAGCGAGCTCGACCTTGA
>Glyma14g11400.2 sequence type=CDS gene model=Glyma14g11400 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGGAGGCAGGTTACAATCCTCGTACCGTCGAAGAGGTCTTTAGGGATTTCAAGGGTCGCAGAGCTGCTTTGATTAAAGCCCTCACCACCGAGAAGGAAAATCTTTGCCTTTATGGATTTCCAAGTGAGCAGTGGGAAGTCAATCTGCCAGCTGAGGAGGTGCCCCCTGAGCTTCCAGAGCCAGCATTGGGCATTAACTTTGCCAGAGACGGGATGCAAGAAAAGGACTGGCTGTCTTTGGTTGCTGTACACAGTGATGCTTGGTTGCTTGCTGTGGCTTTTTATTTTGGTGCTAGGTTTGGATTTGACAAGGCTGATAGGAAGCGACTATTTAATATGATAAATGATCTTCCGACAATATTTGAGGTTGTTACAGGGATGGCCAAGAAACAAGGAAAGGAAAAGTCATCAGTTTCAAATCATAGCAGTACCAAATCTAAGTCAAACTCTAAGCGAGGTTCTGAATCAAAGTATACAAAAGCAATGCAATCAAAGGACGAGGATGATGAGGGTGGTGCGGGTTTGGGTTTGGGTTTGGAAGACGAAGACGAAGAGGAACATGGAGATACCTTGTGTGGGGCATGTGGAGAGAGCTATGCTGCTGATGAGTTCTGGATTTGCTGCGACATCTGCGAGAAATGGTTCCATGGAAAGTGCGTGAAGATTACCCCTGCAAGGGCTGAGCATATCAAGCAGTACAAATGTCCTTCTTGCAGCAACAAGCGAGCTCGACCTTGA
Predicted protein sequences of Glyma14g11400
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma14g11400.1 sequence type=predicted peptide gene model=Glyma14g11400 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MEAGYNPRTVEEVFRDFKGRRAALIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWEVNLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDAWLLAVAFYFGARFGFDKADRKRLFNMINDLPTIFEVVTGMAKKQGKEKSSVSNHSSTKSKSNSKRGSESKYTKAMQSKDEDDEGGAGLGLGLEDEDEEEHGDTLCGACGESYAADEFWICCDICEKWFHGKCVKITPARAEHIKQYKCPSCSNKRARP*
>Glyma14g11400.2 sequence type=predicted peptide gene model=Glyma14g11400 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MEAGYNPRTVEEVFRDFKGRRAALIKALTTEKENLCLYGFPSEQWEVNLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDAWLLAVAFYFGARFGFDKADRKRLFNMINDLPTIFEVVTGMAKKQGKEKSSVSNHSSTKSKSNSKRGSESKYTKAMQSKDEDDEGGAGLGLGLEDEDEEEHGDTLCGACGESYAADEFWICCDICEKWFHGKCVKITPARAEHIKQYKCPSCSNKRARP*