Glyma14g11140 - SoyBase

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Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma14g11140

Feature Type:	gene_model
Chromosome:	Gm14
Start:	9454764
stop:	9463610
Source:	JGI
Version:	Wm82.a1.v1.1
High confidence:	yes

A newer version of this gene model can be found here:

Annotations for Glyma14g11140

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT2G26300	AT	Annotation by Michelle Graham. TAIR10: G protein alpha subunit 1 \| chr2:11198087-11200822 FORWARD LENGTH=383	SoyBase	E_val: 0	ISS
GO:0000303	GO-bp	Annotation by Michelle Graham. GO Biological Process: response to superoxide	SoyBase	N/A	ISS
GO:0006396	GO-bp	Annotation by Michelle Graham. GO Biological Process: RNA processing	SoyBase	N/A	ISS
GO:0006471	GO-bp	Annotation by Michelle Graham. GO Biological Process: protein ADP-ribosylation	SoyBase	N/A	ISS
GO:0006499	GO-bp	Annotation by Michelle Graham. GO Biological Process: N-terminal protein myristoylation	SoyBase	N/A	ISS
GO:0006571	GO-bp	Annotation by Michelle Graham. GO Biological Process: tyrosine biosynthetic process	SoyBase	N/A	ISS
GO:0007165	GO-bp	Annotation by Michelle Graham. GO Biological Process: signal transduction	SoyBase	N/A	ISS
GO:0007186	GO-bp	Annotation by Michelle Graham. GO Biological Process: G-protein coupled receptor signaling pathway	SoyBase	N/A	ISS
GO:0007188	GO-bp	Annotation by Michelle Graham. GO Biological Process: adenylate cyclase-modulating G-protein coupled receptor signaling pathway	SoyBase	N/A	ISS
GO:0008219	GO-bp	Annotation by Michelle Graham. GO Biological Process: cell death	SoyBase	N/A	ISS
GO:0009094	GO-bp	Annotation by Michelle Graham. GO Biological Process: L-phenylalanine biosynthetic process	SoyBase	N/A	ISS
GO:0009738	GO-bp	Annotation by Michelle Graham. GO Biological Process: abscisic acid mediated signaling pathway	SoyBase	N/A	ISS
GO:0009740	GO-bp	Annotation by Michelle Graham. GO Biological Process: gibberellic acid mediated signaling pathway	SoyBase	N/A	ISS
GO:0009744	GO-bp	Annotation by Michelle Graham. GO Biological Process: response to sucrose stimulus	SoyBase	N/A	ISS
GO:0009749	GO-bp	Annotation by Michelle Graham. GO Biological Process: response to glucose stimulus	SoyBase	N/A	ISS
GO:0009750	GO-bp	Annotation by Michelle Graham. GO Biological Process: response to fructose stimulus	SoyBase	N/A	ISS
GO:0009755	GO-bp	Annotation by Michelle Graham. GO Biological Process: hormone-mediated signaling pathway	SoyBase	N/A	ISS
GO:0009785	GO-bp	Annotation by Michelle Graham. GO Biological Process: blue light signaling pathway	SoyBase	N/A	ISS
GO:0009788	GO-bp	Annotation by Michelle Graham. GO Biological Process: negative regulation of abscisic acid mediated signaling pathway	SoyBase	N/A	ISS
GO:0009789	GO-bp	Annotation by Michelle Graham. GO Biological Process: positive regulation of abscisic acid mediated signaling pathway	SoyBase	N/A	ISS
GO:0009845	GO-bp	Annotation by Michelle Graham. GO Biological Process: seed germination	SoyBase	N/A	ISS
GO:0009863	GO-bp	Annotation by Michelle Graham. GO Biological Process: salicylic acid mediated signaling pathway	SoyBase	N/A	ISS
GO:0009873	GO-bp	Annotation by Michelle Graham. GO Biological Process: ethylene mediated signaling pathway	SoyBase	N/A	ISS
GO:0010027	GO-bp	Annotation by Michelle Graham. GO Biological Process: thylakoid membrane organization	SoyBase	N/A	ISS
GO:0010119	GO-bp	Annotation by Michelle Graham. GO Biological Process: regulation of stomatal movement	SoyBase	N/A	ISS
GO:0010244	GO-bp	Annotation by Michelle Graham. GO Biological Process: response to low fluence blue light stimulus by blue low-fluence system	SoyBase	N/A	ISS
GO:0022402	GO-bp	Annotation by Michelle Graham. GO Biological Process: cell cycle process	SoyBase	N/A	ISS
GO:0042127	GO-bp	Annotation by Michelle Graham. GO Biological Process: regulation of cell proliferation	SoyBase	N/A	ISS
GO:0071215	GO-bp	Annotation by Michelle Graham. GO Biological Process: cellular response to abscisic acid stimulus	SoyBase	N/A	ISS
GO:0072593	GO-bp	Annotation by Michelle Graham. GO Biological Process: reactive oxygen species metabolic process	SoyBase	N/A	ISS
GO:0005737	GO-cc	Annotation by Michelle Graham. GO Cellular Compartment: cytoplasm	SoyBase	N/A	ISS
GO:0005789	GO-cc	Annotation by Michelle Graham. GO Cellular Compartment: endoplasmic reticulum membrane	SoyBase	N/A	ISS
GO:0005834	GO-cc	Annotation by Michelle Graham. GO Cellular Compartment: heterotrimeric G-protein complex	SoyBase	N/A	ISS
GO:0005886	GO-cc	Annotation by Michelle Graham. GO Cellular Compartment: plasma membrane	SoyBase	N/A	ISS
GO:0009506	GO-cc	Annotation by Michelle Graham. GO Cellular Compartment: plasmodesma	SoyBase	N/A	ISS
GO:0031234	GO-cc	Annotation by Michelle Graham. GO Cellular Compartment: extrinsic to internal side of plasma membrane	SoyBase	N/A	ISS
GO:0001664	GO-mf	Annotation by Michelle Graham. GO Molecular Function: G-protein coupled receptor binding	SoyBase	N/A	ISS
GO:0003924	GO-mf	Annotation by Michelle Graham. GO Molecular Function: GTPase activity	SoyBase	N/A	ISS
GO:0004871	GO-mf	Annotation by Michelle Graham. GO Molecular Function: signal transducer activity	SoyBase	N/A	ISS
GO:0005095	GO-mf	Annotation by Michelle Graham. GO Molecular Function: GTPase inhibitor activity	SoyBase	N/A	ISS
GO:0005515	GO-mf	Annotation by Michelle Graham. GO Molecular Function: protein binding	SoyBase	N/A	ISS
GO:0005525	GO-mf	Annotation by Michelle Graham. GO Molecular Function: GTP binding	SoyBase	N/A	ISS
GO:0016247	GO-mf	Annotation by Michelle Graham. GO Molecular Function: channel regulator activity	SoyBase	N/A	ISS
GO:0019001	GO-mf	Annotation by Michelle Graham. GO Molecular Function: guanyl nucleotide binding	SoyBase	N/A	ISS
GO:0031683	GO-mf	Annotation by Michelle Graham. GO Molecular Function: G-protein beta/gamma-subunit complex binding	SoyBase	N/A	ISS
GO:0051020	GO-mf	Annotation by Michelle Graham. GO Molecular Function: GTPase binding	SoyBase	N/A	ISS
KOG0082	KOG	G-protein alpha subunit (small G protein superfamily)	JGI		ISS
PTHR10218	Panther	GTP-BINDING PROTEIN ALPHA SUBUNIT	JGI		ISS
PTHR10218:SF25	Panther	gb def: guanine nucleotide-binding protein, alpha subunit [caenorhabditis elegans]	JGI		ISS
PF00503	PFAM	G-protein alpha subunit	JGI		ISS
UniRef100_A8D7M4	UniRef	Annotation by Michelle Graham. Most informative UniRef hit: Hetrotrimeric G protein alpha subunit n=1 Tax=Phaseolus vulgaris RepID=A8D7M4_PHAVU	SoyBase	E_val: 0	ISS
UniRef100_I1M946	UniRef	Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=2 Tax=Glycine max RepID=I1M946_SOYBN	SoyBase	E_val: 0	ISS

Expression Patterns of Glyma14g11140

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology


Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Paralogs of Glyma14g11140

Paralog	Evidence	Comments
Glyma17g34450	IGC	Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.3.

Gene model name correspondences to Glyma14g11140 Gene Call Version Wm82.a1.v1.1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma.14g098000	Wm82.a2.v1	IGC	As supplied by JGI

References for Glyma14g11140

Schmutz et al. 2010
Genome sequence of the palaeopolyploid soybean
Nature 2010, 463:178-183

Transcripts of Glyma14g11140

Limit To All Plant Sequences

>Glyma14g11140.2   sequence type=transcript   gene model=Glyma14g11140   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
GTTAGTAATTGCTCTGGCCTCGCTTTCTGTGTCTCTGTCTTTGACCGAAGCCAAAGAAGAGGAAGAAACCTTAGCAGCTTTCGGCGCTCTTTTTCTTTAATCTCTAATCTATTTTCCTTTTCCCTTCTTCCCTTCCAATTTTTCCCATATCATATTCAATTCTGTGTCTCTATGACACACTAGTACTTGTTGTTTTGTGTACCCATTATTACCCACACACCCCAAATACAAATTATATTCTAATCCATTATTTTATATTACTATTACCTTAAACTAAACAAAAATAAGTTATTGTTGTTGTTGTTATGTTTTTATATACTGGAGTGATGTATCTCCCTGGTTTCTACTCTCTATGCAATGAACAAAGCAACTGAAATTGTTGCTTTTTAGCTTCAACAATCTCTCATCCAACGCATCAGCCAAATCTAGTGGCATATCTCAGCCTTCACTTTCACAACACTGCCAAAAAAAAAGAAGTAGAAAAAAAGAAACCCTTTACTTCTTTTTAGAAAACATGGGCTTACTCTGTAGCAGAAATCGCCGGTATAATGATGCTGATGCTGAAGAAAGTGCACAGACTGCAGAGATTGAAAGAAGAATAGAATTAGAAACGAAGGCTGAAAAGCATATTCAGAAACTTCTACTACTTGGAGCTGGAGAGTCAGGGAAGTCCACAATATTTAAGCAGATAAAACTTTTGTTTCAAACTGGCTTTGACGAGGCAGAACTAAAAAGCTACTTACCAGTCATTCATGCTAATGTGTATCAGACAATAAAATTACTGCATGATGGATCAAAGGAGTTTGCCCAGAATGATGTTGATTCTTCAAAGTATGTTATATCCAATGAAAATAAGGAAATTGGGGAAAAGTTATCAGAAATTGGAGGCAGGCTGGATTACCCATATCTCACCAAGGAGCTTGCACAGGAAATTGAGAATCTGTGGAAGGATCCTGCAATTCAGGAGACATATGCCCGTGGTAGTGAGCTTCAAATTCCAGATTGTACTGATTATTTCATGGAAAATTTGCAAAGGCTGTCTGACACAAATTATGTGCCAACAAAGGAGGATGTTTTGTATGCAAGAGTGCGTACCTCTGGCGTTGTTGAGATCCAGTTCAGCCCTGTTGGGGAAAGTAAGAAAAGTGGTGAAGTCTATAGACTCTTTGATGTTGGCGGCCAGAGAAATGAGAGGAGAAAATGGATCCATTTGTTTGAAGGAGTTTCAGCTGTAATATTCTGTGCTGCAATTAGCGAGTATGATCAGACACTTTTTGAGGATGAAAACAGAAACAGAATGACCGAGACTAAGGAACTTTTCGAGTGGATCCTGAAGCAACCATGTTTTGAGAAAACATCCTTCATGTTATTCTTAAACAAGTTTGACATATTTGAGAAGAAGATCCTGAAAGTCCCACTTAATGTATGCGAGTGGTTCAAAGATTACCAACCAGTTTCAACAGGGAAACAAGAAATTGAGCATGCTTATGAGTTTGTGAAGAAAAAATTTGAGGAGTCATATTTCCAGAGCACTGCTCCTGATCGTGTTGATCGCGTCTTTAAGATCTACCGGACCACTGCCCTTGATCAGAAGGTTGTGAAGAAGACTTTCAAGCTTGTTGATGAGACTTTGAGGCGGAGAAATCTATTTGAGGCTGGCTTGTTATGAGCAGTGATGAACCATATATGTTATAAAAAGGGATAACAATATTTTTACATTGAAGAGGTGACCAGATTTTGGGTATACTAGGGAGTCAGGTATACTAAATATTAAATCGATTTGTTGAATATTATTTCAAGTTAATCTTGTGGAGAAAGAAAAGCCTTTTCTTGGAGTTGATCTCCACATCCATCTTCAAAGGGCAAATTTATTACTACTAGTCTATTACTACTCAAGTTTCAAGATTTGATATCATGATTTGTGATCATGCTTTAATAGATTGAAAATCACTAATCATATGATATATTTCATATTTCATACTATTAGTGATTATATTTTGCCTCCTAGTGGTCTTGTGTTGATGTGCATGCATCATGCATATGCATGCACACGTGTAAATAATTTGGAGATGTGCCAAGTGTCATGTGCTGGCTTTGTCGACTTCTGAATTCAGACCTTATAATTTGCTTTTAATACTCGTTTCGAATATTGG

Coding sequences of Glyma14g11140

Limit To All Plant Sequences

>Glyma14g11140.1   sequence type=CDS   gene model=Glyma14g11140   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGCTGTCTTTTGTAACAGAAAACATGGGCTTACTCTGTAGCAGAAATCGCCGGTATAATGATGCTGATGCTGAAGAAAGTGCACAGACTGCAGAGATTGAAAGAAGAATAGAATTAGAAACGAAGGCTGAAAAGCATATTCAGAAACTTCTACTACTTGGAGCTGGAGAGTCAGGGAAGTCCACAATATTTAAGCAGATAAAACTTTTGTTTCAAACTGGCTTTGACGAGGCAGAACTAAAAAGCTACTTACCAGTCATTCATGCTAATGTGTATCAGACAATAAAATTACTGCATGATGGATCAAAGGAGTTTGCCCAGAATGATGTTGATTCTTCAAAGTATGTTATATCCAATGAAAATAAGGAAATTGGGGAAAAGTTATCAGAAATTGGAGGCAGGCTGGATTACCCATATCTCACCAAGGAGCTTGCACAGGAAATTGAGAATCTGTGGAAGGATCCTGCAATTCAGGAGACATATGCCCGTGGTAGTGAGCTTCAAATTCCAGATTGTACTGATTATTTCATGGAAAATTTGCAAAGGCTGTCTGACACAAATTATGTGCCAACAAAGGAGGATGTTTTGTATGCAAGAGTGCGTACCTCTGGCGTTGTTGAGATCCAGTTCAGCCCTGTTGGGGAAAGTAAGAAAAGTGGTGAAGTCTATAGACTCTTTGATGTTGGCGGCCAGAGAAATGAGAGGAGAAAATGGATCCATTTGTTTGAAGGAGTTTCAGCTGTAATATTCTGTGCTGCAATTAGCGAGTATGATCAGACACTTTTTGAGGATGAAAACAGAAACAGAATGACCGAGACTAAGGAACTTTTCGAGTGGATCCTGAAGCAACCATGTTTTGAGAAAACATCCTTCATGTTATTCTTAAACAAGTTTGACATATTTGAGAAGAAGATCCTGAAAGTCCCACTTAATGTATGCGAGTGGTTCAAAGATTACCAACCAGTTTCAACAGGGAAACAAGAAATTGAGCATGCTTATGAGTTTGTGAAGAAAAAATTTGAGGAGTCATATTTCCAGAGCACTGCTCCTGATCGTGTTGATCGCGTCTTTAAGATCTACCGGACCACTGCCCTTGATCAGAAGGTTGTGAAGAAGACTTTCAAGCTTGTTGATGAGACTTTGAGGCGGAGAAATCTATTTGAGGCTGGCTTGTTATGA

>Glyma14g11140.2   sequence type=CDS   gene model=Glyma14g11140   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGGCTTACTCTGTAGCAGAAATCGCCGGTATAATGATGCTGATGCTGAAGAAAGTGCACAGACTGCAGAGATTGAAAGAAGAATAGAATTAGAAACGAAGGCTGAAAAGCATATTCAGAAACTTCTACTACTTGGAGCTGGAGAGTCAGGGAAGTCCACAATATTTAAGCAGATAAAACTTTTGTTTCAAACTGGCTTTGACGAGGCAGAACTAAAAAGCTACTTACCAGTCATTCATGCTAATGTGTATCAGACAATAAAATTACTGCATGATGGATCAAAGGAGTTTGCCCAGAATGATGTTGATTCTTCAAAGTATGTTATATCCAATGAAAATAAGGAAATTGGGGAAAAGTTATCAGAAATTGGAGGCAGGCTGGATTACCCATATCTCACCAAGGAGCTTGCACAGGAAATTGAGAATCTGTGGAAGGATCCTGCAATTCAGGAGACATATGCCCGTGGTAGTGAGCTTCAAATTCCAGATTGTACTGATTATTTCATGGAAAATTTGCAAAGGCTGTCTGACACAAATTATGTGCCAACAAAGGAGGATGTTTTGTATGCAAGAGTGCGTACCTCTGGCGTTGTTGAGATCCAGTTCAGCCCTGTTGGGGAAAGTAAGAAAAGTGGTGAAGTCTATAGACTCTTTGATGTTGGCGGCCAGAGAAATGAGAGGAGAAAATGGATCCATTTGTTTGAAGGAGTTTCAGCTGTAATATTCTGTGCTGCAATTAGCGAGTATGATCAGACACTTTTTGAGGATGAAAACAGAAACAGAATGACCGAGACTAAGGAACTTTTCGAGTGGATCCTGAAGCAACCATGTTTTGAGAAAACATCCTTCATGTTATTCTTAAACAAGTTTGACATATTTGAGAAGAAGATCCTGAAAGTCCCACTTAATGTATGCGAGTGGTTCAAAGATTACCAACCAGTTTCAACAGGGAAACAAGAAATTGAGCATGCTTATGAGTTTGTGAAGAAAAAATTTGAGGAGTCATATTTCCAGAGCACTGCTCCTGATCGTGTTGATCGCGTCTTTAAGATCTACCGGACCACTGCCCTTGATCAGAAGGTTGTGAAGAAGACTTTCAAGCTTGTTGATGAGACTTTGAGGCGGAGAAATCTATTTGAGGCTGGCTTGTTATGA

Predicted protein sequences of Glyma14g11140

Limit To All Plant Sequences

>Glyma14g11140.1   sequence type=predicted peptide   gene model=Glyma14g11140   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MLSFVTENMGLLCSRNRRYNDADAEESAQTAEIERRIELETKAEKHIQKLLLLGAGESGKSTIFKQIKLLFQTGFDEAELKSYLPVIHANVYQTIKLLHDGSKEFAQNDVDSSKYVISNENKEIGEKLSEIGGRLDYPYLTKELAQEIENLWKDPAIQETYARGSELQIPDCTDYFMENLQRLSDTNYVPTKEDVLYARVRTSGVVEIQFSPVGESKKSGEVYRLFDVGGQRNERRKWIHLFEGVSAVIFCAAISEYDQTLFEDENRNRMTETKELFEWILKQPCFEKTSFMLFLNKFDIFEKKILKVPLNVCEWFKDYQPVSTGKQEIEHAYEFVKKKFEESYFQSTAPDRVDRVFKIYRTTALDQKVVKKTFKLVDETLRRRNLFEAGLL*

>Glyma14g11140.2   sequence type=predicted peptide   gene model=Glyma14g11140   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MGLLCSRNRRYNDADAEESAQTAEIERRIELETKAEKHIQKLLLLGAGESGKSTIFKQIKLLFQTGFDEAELKSYLPVIHANVYQTIKLLHDGSKEFAQNDVDSSKYVISNENKEIGEKLSEIGGRLDYPYLTKELAQEIENLWKDPAIQETYARGSELQIPDCTDYFMENLQRLSDTNYVPTKEDVLYARVRTSGVVEIQFSPVGESKKSGEVYRLFDVGGQRNERRKWIHLFEGVSAVIFCAAISEYDQTLFEDENRNRMTETKELFEWILKQPCFEKTSFMLFLNKFDIFEKKILKVPLNVCEWFKDYQPVSTGKQEIEHAYEFVKKKFEESYFQSTAPDRVDRVFKIYRTTALDQKVVKKTFKLVDETLRRRNLFEAGLL*

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