Glyma14g10850 - SoyBase

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Report for Sequence Feature Glyma14g10850

Feature Type:	gene_model
Chromosome:	Gm14
Start:	9045709
stop:	9054086
Source:	JGI
Version:	Wm82.a1.v1.1
High confidence:	yes

A newer version of this gene model can be found here:

Annotations for Glyma14g10850

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT5G50960	AT	Annotation by Michelle Graham. TAIR10: nucleotide binding protein 35 \| chr5:20734267-20735824 FORWARD LENGTH=350	SoyBase	E_val: 0	ISS
GO:0005634	GO-cc	Annotation by Michelle Graham. GO Cellular Compartment: nucleus	SoyBase	N/A	ISS
GO:0005829	GO-cc	Annotation by Michelle Graham. GO Cellular Compartment: cytosol	SoyBase	N/A	ISS
GO:0000166	GO-mf	Annotation by Michelle Graham. GO Molecular Function: nucleotide binding	SoyBase	N/A	ISS
GO:0005524	GO-mf	Annotation by Michelle Graham. GO Molecular Function: ATP binding	SoyBase	N/A	ISS
GO:0042803	GO-mf	Annotation by Michelle Graham. GO Molecular Function: protein homodimerization activity	SoyBase	N/A	ISS
GO:0051536	GO-mf	Annotation by Michelle Graham. GO Molecular Function: iron-sulfur cluster binding	SoyBase	N/A	ISS
KOG3022	KOG	Predicted ATPase, nucleotide-binding	JGI		ISS
PTHR23264	Panther	NUCLEOTIDE-BINDING PROTEIN NBP35(YEAST)-RELATED	JGI		ISS
PTHR23264:SF8	Panther	NUCLEOTIDE-BINDING PROTEIN 1 (NBP 1)/NBP35(YEAST)	JGI		ISS
PF02374	PFAM	Anion-transporting ATPase	JGI		ISS
PF10609	PFAM	ParA/MinD ATPase like	JGI		ISS
UniRef100_G7I9X8	UniRef	Annotation by Michelle Graham. Most informative UniRef hit: Cytosolic Fe-S cluster assembly factor nbp35 n=2 Tax=Medicago truncatula RepID=G7I9X8_MEDTR	SoyBase	E_val: 0	ISS
UniRef100_I1M926	UniRef	Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1M926_SOYBN	SoyBase	E_val: 0	ISS

Expression Patterns of Glyma14g10850

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma14g10850 not represented in the dataset	Glyma14g10850 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Paralogs of Glyma14g10850

Paralog	Evidence	Comments
Glyma17g34650	IGC	Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.3.

Gene model name correspondences to Glyma14g10850 Gene Call Version Wm82.a1.v1.1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma.14g095000	Wm82.a2.v1	IGC	As supplied by JGI

References for Glyma14g10850

Schmutz et al. 2010
Genome sequence of the palaeopolyploid soybean
Nature 2010, 463:178-183

Transcripts of Glyma14g10850

Limit To All Plant Sequences

>Glyma14g10850.2   sequence type=transcript   gene model=Glyma14g10850   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
AAAACTTTGGAATCATTTAAAGTGTGAGAACTCTAATTGATTTTATTTGAGACTATCACCAACGGTCTCAAATTAAGAAATACGGACATTTCAATCTTTTATTGTGTTTGTTACACGATCATCAATGTTCATGTCCAGATTAAGTTTAATGTGTTTTACAGGTGTTCAGTATCCGTGTCGTGTTCGATGTCAGTGTTTCATATTCAAACAATGGAAATTGAAGCAAGTGCAAGCCCAGGTCGTGTTATTGACGTTGAGAAAAGGCATGGCCAAGAGCAAAGTCACGATTGACTTCAACTTGCGGCCACAAAGGCAATAACCAGCACCATCATCGTCAAATGCAAACACCATAGATTGAGAAATTAGGGAGCGTGGTCAACTGATGCTGTGCAAAGGGGTCATTTCGGAAAGAAAAATAAAAATTTAAAACGTTGACAGATGTCAATTTTTAATTGAGTCGCAGGTTTTTCCAGTCTCTTGCATATCGGAGGATATATAACAAAGCTCTTAATAAAAACACAAACCCTAAGAGCCAAACACGACGCTGTGCCTTGTGTAGTTGCCCAACCGCGTCACCACAGATAGTTACACTTTTTTCTTCAACACAACAGAGGAGCTTCCATGGAGAATGCAGACATCCCTGAGAATGCCAACGAGCATTGCCCAGGTCCTCAGTCTGAATCTGCTGGAAAATCCGATGCATGTGAAGGGTGCCCGAATCAGCAAATTTGTGCCACTGCCCCCAAAGGCCCTGACCCTGATCTGGTTGCCATTGCAGAAAGAATGGCTACTGTGAAACATAAGATATTGGTCTTATCAGGAAAAGGGGGAGTTGGCAAGAGCACGTTCTCTGCCCAGCTGGCATTTGCTTTAGCAGCAAGGGATTTTCAGGTAGGTCTTCTTGACGTTGATATCTGTGGTCCAAGCATTCCAAAGATGCTTGGCCTAGAAGGTCAAGAGATACATCAGAGCAACCTTGGTTGGTCCCCTGTCTATGTGGAGTCCAACCTTGGGGTCATGTCAGTTGGGTTCATGCTTCCCAATCCAGATGAAGCTGTTATATGGAGAGGTCCTCGCAAAAATGGACTTATCAAGCAGTTTCTAAAAGATGTCTACTGGGGTGAACTTGATTTTCTAATTGTGGATGCTCCACCGGGAACCTCAGATGAACACATTTCCCTTGTTCAATGCCTTGATGCCACTGGAATAGATGGTGCAATCATAGTCACTACTCCTCAACAAATCTCTCTTATTGATGTGAGAAAAGAAGTGAATTTTTGCAAGAAAGTTGGCGTGAAAGTTCTTGGGGTTGTAGAGAATATGAGTGGCCTGTGCCTGCCCATCACAGATTTCAAGTTTATGAAGTTGACTGATAATGGTGAGCAGAAAGATGTTACACAGTGGGTTTGGGAATACATGAGAGAAAAAGCGCCAGAAATGCTGAATTTGCTTGCTTGCACTGAAGTATTTGATAGTAGTGGTGGTGGAGCAGTGAAAATGTGCAATGATATGGGGGTAACCTTTCTTGGTAAAGTTCCTTTAGATCCACAGCTTTGTAAGGCAGCTGAAGAGGGTTCATCCTGCTTTGCTAAAAAAGATTGCGTTGTTAGTGCTCCAGCGTTAAAGAAGATTATAGAGCAGCTGATTGAAACTAATGGGTGGTCAATGTTATTAAGCAATGGAGTGTAGCAGATATTGCTTTATGACGATTTTTGAAAATCAAAATCTAATTTTATCTATGAACGGTTTGCACAGAAATTTTCTTTAATACTTTAAGCCATGTAGGGTTGAGACATTTTGGGACCTCAGGTATTGGTTTTCTGGGCCTCTATGTTATACGTATTTGACGACGTAGTTACTAATAATGCTTATTTCTCTATGTTTTTGAGATTATATTTCTTCAATACATTGGAGTTTGTAGCCATATGAACATTTGCCGTTCGTTGAGTTGCATTCGAATCATGCTCTAAATTTTGATTTGG

>Glyma14g10850.3   sequence type=transcript   gene model=Glyma14g10850   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
AAAACTTTGGAATCATTTAAAGTGTGAGAACTCTAATTGATTTTATTTGAGACTATCACCAACGGTCTCAAATTAAGAAATACGGACATTTCAATCTTTTATTGTGTTTGTTACACGATCATCAATGTTCATGTCCAGATTAAGTTTAATGTGTTTTACAGGTGTTCAGTATCCGTGTCGTGTTCGATGTCAGTGTTTCATATTCAAACAATGGAAATTGAAGCAAGTGCAAGCCCAGGTCGTGTTATTGACGTTGAGAAAAGGCATGGCCAAGAGCAAAGTCACGATTGACTTCAACTTGCGGCCACAAAGGCAATAACCAGCACCATCATCGTCAAATGCAAACACCATAGATTGAGAAATTAGGGAGCGTGGTCAACTGATGCTGTGCAAAGGGGTCATTTCGGAAAGAAAAATAAAAATTTAAAACGTTGACAGATGTCAATTTTTAATTGAGTCGCAGGTTTTTCCAGTCTCTTGCATATCGGAGGATATATAACAAAGCTCTTAATAAAAACACAAACCCTAAGAGCCAAACACGACGCTGTGCCTTGTGTAGTTGCCCAACCGCGTCACCACAGAATAATGAACCAAAGAACCGTAAATGCCGTCGACACAATTTCTCTTTAGATTCAAGCTTGTCGTAAACCAACGACGCAACATCCGCGACACAATATGATTCCGTGACGCGTAAGGCACCGCGATTGCGATTTTTGCAGAGTCCGCAATGCAACGCCATTGCAATTGCATTTTCACTAAAACCCGCTATGCTATTTGACAGCACTGCCGCCTTTGCCCATCTTTATTTGTGACACGTTCTTTCTTCAGATAGTTACACTTTTTTCTTCAACACAACAGAGGAGCTTCCATGGAGAATGCAGACATCCCTGAGAATGCCAACGAGCATTGCCCAGGTCCTCAGTCTGAATCTGCTGGAAAATCCGATGCATGTGAAGGGTGCCCGAATCAGCAAATTTGTGCCACTGCCCCCAAAGGCCCTGACCCTGATCTGGTTGCCATTGCAGAAAGAATGGCTACTGTGAAACATAAGATATTGGTCTTATCAGGAAAAGGGGGAGTTGGCAAGAGCACGTTCTCTGCCCAGCTGGCATTTGCTTTAGCAGCAAGGGATTTTCAGGTAGGTCTTCTTGACGTTGATATCTGTGGTCCAAGCATTCCAAAGATGCTTGGCCTAGAAGGTCAAGAGATACATCAGAGCAACCTTGGTTGGTCCCCTGTCTATGTGGAGTCCAACCTTGGGGTCATGTCAGTTGGGTTCATGCTTCCCAATCCAGATGAAGCTGTTATATGGAGAGGTCCTCGCAAAAATGGACTTATCAAGCAGTTTCTAAAAGATGTCTACTGGGGTGAACTTGATTTTCTAATTGTGGATGCTCCACCGGGAACCTCAGATGAACACATTTCCCTTGTTCAATGCCTTGATGCCACTGGAATAGATGGTGCAATCATAGTCACTACTCCTCAACAAATCTCTCTTATTGATGTGAGAAAAGAAGTGAATTTTTGCAAGAAAGTTGGCGTGAAAGTTCTTGGGGTTGTAGAGAATATGAGTGGCCTGTGCCTGCCCATCACAGATTTCAAGTTTATGAAGTTGACTGATAATGGTGAGCAGAAAGATGTTACACAGTGGGTTTGGGAATACATGAGAGAAAAAGCGCCAGAAATGCTGAATTTGCTTGCTTGCACTGAAGTATTTGATAGTAGTGGTGGTGGAGCAGTGAAAATGTGCAATGATATGGGGGTAACCTTTCTTGGTAAAGTTCCTTTAGATCCACAGCTTTGTAAGGCAGCTGAAGAGGGTTCATCCTGCTTTGCTAAAAAAGATTGCGTTGTTAGTGCTCCAGCGTTAAAGAAGATTATAGAGCAGCTGATTGAAACTAATGGGTGGTCAATGTTATTAAGCAATGGAGTGTAGCAGATATTGCTTTATGACGATTTTTGAAAATCAAAATCTAATTTTATCTATGAACGGTTTGCACAGAAATTTTCTTTAATACTTTAAGCCATGTAGGGTTGAGACATTTTGGGACCTCAGGTATTGGTTTTCTGGGCCTCTATGTTATACGTATTTGACGACGTAGTTACTAATAATGCTTATTTCTCTATGTTTTTGAGATTATATTTCTTCAATACATTGGAGTTTGTAGCCATATGAACATTTGCCGTTCGTTGAGTTGCATTCGAATCATGCTCTAAATTTTGATTTGG

Coding sequences of Glyma14g10850

Limit To All Plant Sequences

>Glyma14g10850.1   sequence type=CDS   gene model=Glyma14g10850   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGAGAATGCAGACATCCCTGAGAATGCCAACGAGCATTGCCCAGGTCCTCAGTCTGAATCTGCTGGAAAATCCGATGCATGTGAAGGGTGCCCGAATCAGCAAATTTGTGCCACTGCCCCCAAAGGCCCTGACCCTGATCTGGTTGCCATTGCAGAAAGAATGGCTACTGTGAAACATAAGATATTGGTCTTATCAGGAAAAGGGGGAGTTGGCAAGAGCACGTTCTCTGCCCAGCTGGCATTTGCTTTAGCAGCAAGGGATTTTCAGGTAGGTCTTCTTGACGTTGATATCTGTGGTCCAAGCATTCCAAAGATGCTTGGCCTAGAAGGTCAAGAGATACATCAGAGCAACCTTGGTTGGTCCCCTGTCTATGTGGAGTCCAACCTTGGGGTCATGTCAGTTGGGTTCATGCTTCCCAATCCAGATGAAGCTGTTATATGGAGAGGTCCTCGCAAAAATGGACTTATCAAGCAGTTTCTAAAAGATGTCTACTGGGGTGAACTTGATTTTCTAATTGTGGATGCTCCACCGGGAACCTCAGATGAACACATTTCCCTTGTTCAATGCCTTGATGCCACTGGAATAGATGGTGCAATCATAGTCACTACTCCTCAACAAATCTCTCTTATTGATGTGAGAAAAGAAGTGAATTTTTGCAAGAAAGTTGGCGTGAAAGTTCTTGGGGTTGTAGAGAATATGAGTGGCCTGTGCCTGCCCATCACAGATTTCAAGTTTATGAAGTTGACTGATAATGGTGAGCAGAAAGATGTTACACAGTGGGTTTGGGAATACATGAGAGAAAAAGCGCCAGAAATGCTGAATTTGCTTGCTTGCACTGAAGTATTTGATAGTAGTGGTGGTGGAGCAGTGAAAATGTGCAATGATATGGGGGTAACCTTTCTTGGTAAAGTTCCTTTAGATCCACAGCTTTGTAAGGCAGCTGAAGAGGGTTCATCCTGCTTTGCTAAAAAAGATTGCGTTGTTAGTGCTCCAGCGTTAAAGAAGATTATAGAGCAGCTGATTGAAACTAATGGGTGGTCAATGTTATTAAGCAATGGAGTGTAG

>Glyma14g10850.2   sequence type=CDS   gene model=Glyma14g10850   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGAGAATGCAGACATCCCTGAGAATGCCAACGAGCATTGCCCAGGTCCTCAGTCTGAATCTGCTGGAAAATCCGATGCATGTGAAGGGTGCCCGAATCAGCAAATTTGTGCCACTGCCCCCAAAGGCCCTGACCCTGATCTGGTTGCCATTGCAGAAAGAATGGCTACTGTGAAACATAAGATATTGGTCTTATCAGGAAAAGGGGGAGTTGGCAAGAGCACGTTCTCTGCCCAGCTGGCATTTGCTTTAGCAGCAAGGGATTTTCAGGTAGGTCTTCTTGACGTTGATATCTGTGGTCCAAGCATTCCAAAGATGCTTGGCCTAGAAGGTCAAGAGATACATCAGAGCAACCTTGGTTGGTCCCCTGTCTATGTGGAGTCCAACCTTGGGGTCATGTCAGTTGGGTTCATGCTTCCCAATCCAGATGAAGCTGTTATATGGAGAGGTCCTCGCAAAAATGGACTTATCAAGCAGTTTCTAAAAGATGTCTACTGGGGTGAACTTGATTTTCTAATTGTGGATGCTCCACCGGGAACCTCAGATGAACACATTTCCCTTGTTCAATGCCTTGATGCCACTGGAATAGATGGTGCAATCATAGTCACTACTCCTCAACAAATCTCTCTTATTGATGTGAGAAAAGAAGTGAATTTTTGCAAGAAAGTTGGCGTGAAAGTTCTTGGGGTTGTAGAGAATATGAGTGGCCTGTGCCTGCCCATCACAGATTTCAAGTTTATGAAGTTGACTGATAATGGTGAGCAGAAAGATGTTACACAGTGGGTTTGGGAATACATGAGAGAAAAAGCGCCAGAAATGCTGAATTTGCTTGCTTGCACTGAAGTATTTGATAGTAGTGGTGGTGGAGCAGTGAAAATGTGCAATGATATGGGGGTAACCTTTCTTGGTAAAGTTCCTTTAGATCCACAGCTTTGTAAGGCAGCTGAAGAGGGTTCATCCTGCTTTGCTAAAAAAGATTGCGTTGTTAGTGCTCCAGCGTTAAAGAAGATTATAGAGCAGCTGATTGAAACTAATGGGTGGTCAATGTTATTAAGCAATGGAGTGTAG

>Glyma14g10850.3   sequence type=CDS   gene model=Glyma14g10850   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGAGAATGCAGACATCCCTGAGAATGCCAACGAGCATTGCCCAGGTCCTCAGTCTGAATCTGCTGGAAAATCCGATGCATGTGAAGGGTGCCCGAATCAGCAAATTTGTGCCACTGCCCCCAAAGGCCCTGACCCTGATCTGGTTGCCATTGCAGAAAGAATGGCTACTGTGAAACATAAGATATTGGTCTTATCAGGAAAAGGGGGAGTTGGCAAGAGCACGTTCTCTGCCCAGCTGGCATTTGCTTTAGCAGCAAGGGATTTTCAGGTAGGTCTTCTTGACGTTGATATCTGTGGTCCAAGCATTCCAAAGATGCTTGGCCTAGAAGGTCAAGAGATACATCAGAGCAACCTTGGTTGGTCCCCTGTCTATGTGGAGTCCAACCTTGGGGTCATGTCAGTTGGGTTCATGCTTCCCAATCCAGATGAAGCTGTTATATGGAGAGGTCCTCGCAAAAATGGACTTATCAAGCAGTTTCTAAAAGATGTCTACTGGGGTGAACTTGATTTTCTAATTGTGGATGCTCCACCGGGAACCTCAGATGAACACATTTCCCTTGTTCAATGCCTTGATGCCACTGGAATAGATGGTGCAATCATAGTCACTACTCCTCAACAAATCTCTCTTATTGATGTGAGAAAAGAAGTGAATTTTTGCAAGAAAGTTGGCGTGAAAGTTCTTGGGGTTGTAGAGAATATGAGTGGCCTGTGCCTGCCCATCACAGATTTCAAGTTTATGAAGTTGACTGATAATGGTGAGCAGAAAGATGTTACACAGTGGGTTTGGGAATACATGAGAGAAAAAGCGCCAGAAATGCTGAATTTGCTTGCTTGCACTGAAGTATTTGATAGTAGTGGTGGTGGAGCAGTGAAAATGTGCAATGATATGGGGGTAACCTTTCTTGGTAAAGTTCCTTTAGATCCACAGCTTTGTAAGGCAGCTGAAGAGGGTTCATCCTGCTTTGCTAAAAAAGATTGCGTTGTTAGTGCTCCAGCGTTAAAGAAGATTATAGAGCAGCTGATTGAAACTAATGGGTGGTCAATGTTATTAAGCAATGGAGTGTAG

Predicted protein sequences of Glyma14g10850

Limit To All Plant Sequences

>Glyma14g10850.1   sequence type=predicted peptide   gene model=Glyma14g10850   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MENADIPENANEHCPGPQSESAGKSDACEGCPNQQICATAPKGPDPDLVAIAERMATVKHKILVLSGKGGVGKSTFSAQLAFALAARDFQVGLLDVDICGPSIPKMLGLEGQEIHQSNLGWSPVYVESNLGVMSVGFMLPNPDEAVIWRGPRKNGLIKQFLKDVYWGELDFLIVDAPPGTSDEHISLVQCLDATGIDGAIIVTTPQQISLIDVRKEVNFCKKVGVKVLGVVENMSGLCLPITDFKFMKLTDNGEQKDVTQWVWEYMREKAPEMLNLLACTEVFDSSGGGAVKMCNDMGVTFLGKVPLDPQLCKAAEEGSSCFAKKDCVVSAPALKKIIEQLIETNGWSMLLSNGV*

>Glyma14g10850.2   sequence type=predicted peptide   gene model=Glyma14g10850   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MENADIPENANEHCPGPQSESAGKSDACEGCPNQQICATAPKGPDPDLVAIAERMATVKHKILVLSGKGGVGKSTFSAQLAFALAARDFQVGLLDVDICGPSIPKMLGLEGQEIHQSNLGWSPVYVESNLGVMSVGFMLPNPDEAVIWRGPRKNGLIKQFLKDVYWGELDFLIVDAPPGTSDEHISLVQCLDATGIDGAIIVTTPQQISLIDVRKEVNFCKKVGVKVLGVVENMSGLCLPITDFKFMKLTDNGEQKDVTQWVWEYMREKAPEMLNLLACTEVFDSSGGGAVKMCNDMGVTFLGKVPLDPQLCKAAEEGSSCFAKKDCVVSAPALKKIIEQLIETNGWSMLLSNGV*

>Glyma14g10850.3   sequence type=predicted peptide   gene model=Glyma14g10850   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MENADIPENANEHCPGPQSESAGKSDACEGCPNQQICATAPKGPDPDLVAIAERMATVKHKILVLSGKGGVGKSTFSAQLAFALAARDFQVGLLDVDICGPSIPKMLGLEGQEIHQSNLGWSPVYVESNLGVMSVGFMLPNPDEAVIWRGPRKNGLIKQFLKDVYWGELDFLIVDAPPGTSDEHISLVQCLDATGIDGAIIVTTPQQISLIDVRKEVNFCKKVGVKVLGVVENMSGLCLPITDFKFMKLTDNGEQKDVTQWVWEYMREKAPEMLNLLACTEVFDSSGGGAVKMCNDMGVTFLGKVPLDPQLCKAAEEGSSCFAKKDCVVSAPALKKIIEQLIETNGWSMLLSNGV*

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