Glyma14g10701 - SoyBase

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Report for Sequence Feature Glyma14g10701

Feature Type:	gene_model
Chromosome:	Gm14
Start:	8897829
stop:	8903073
Source:	JGI
Version:	Wm82.a1.v1.1
High confidence:	yes

A newer version of this gene model can be found here:

Annotations for Glyma14g10701

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT5G11780	AT	Annotation by Michelle Graham. TAIR10: unknown protein; Has 37 Blast hits to 37 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 3; Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). \| chr5:3793928-3795983 FORWARD LENGTH=504	SoyBase	E_val: 6.00E-72	ISS
GO:0008150	GO-bp	Annotation by Michelle Graham. GO Biological Process: biological process	SoyBase	N/A	ISS
GO:0009909	GO-bp	Annotation by Michelle Graham. GO Biological Process: regulation of flower development	SoyBase	N/A	ISS
GO:0016570	GO-bp	Annotation by Michelle Graham. GO Biological Process: histone modification	SoyBase	N/A	ISS
GO:0048449	GO-bp	Annotation by Michelle Graham. GO Biological Process: floral organ formation	SoyBase	N/A	ISS
GO:0005575	GO-cc	Annotation by Michelle Graham. GO Cellular Compartment: cellular component	SoyBase	N/A	ISS
GO:0003674	GO-mf	Annotation by Michelle Graham. GO Molecular Function: molecular function	SoyBase	N/A	ISS
UniRef100_G7KJA6	UniRef	Annotation by Michelle Graham. Most informative UniRef hit: Mitochondrial substrate carrier family protein R n=1 Tax=Medicago truncatula RepID=G7KJA6_MEDTR	SoyBase	E_val: 1.00E-27	ISS
UniRef100_I1M906	UniRef	Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=3 Tax=Glycine max RepID=I1M906_SOYBN	SoyBase	E_val: 0	ISS

Expression Patterns of Glyma14g10701

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma14g10701 not represented in the dataset	Glyma14g10701 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Paralogs of Glyma14g10701

Paralog	Evidence	Comments
Glyma17g34835	IGC	Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.3.

Gene model name correspondences to Glyma14g10701 Gene Call Version Wm82.a1.v1.1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma.14g093500	Wm82.a2.v1	IGC	As supplied by JGI

References for Glyma14g10701

Schmutz et al. 2010
Genome sequence of the palaeopolyploid soybean
Nature 2010, 463:178-183

Coding sequences of Glyma14g10701

Limit To All Plant Sequences

>Glyma14g10701.1   sequence type=CDS   gene model=Glyma14g10701   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGAACCTCAACCATTACCACCACCACGTTCCCCCTTACGAGCACATGCTGAAGGAATCCATCAACCGCTTCTTCGCCGAACACCGCCGCGGCGCCACCGACTTCGCCGACTTCACCTCCATCTTCTCCCGCATGATCCACGCTACCCCCGAACCCCCCATCCCACTCCTCTGGTTCTACGCCGCCCTCGAATTCCGCGCCACACGCGATCCTTCTAGAAGAGCCAGAGACCTGTTCCACTTACTCGTCTCCTGTTCCGGTGCGCGCGGGTCCACGAAACAAATCGCTGCACTCGCACCGTTACTCTTCGTCTTACACCGCTTAGCACTTCTTCAACAAGGGGAATTGTTGAAAACCGAGCTGAATGGGTTGGTGGAAGGGGTTGTGAGTTACTGCAGCATCTGTTGCGGTAGCGAAATTTGCCGCGACGATGACGTGGCGGTGTTGGAGTTTGGGGATTTGATTAAGGTTTGGATGGTGGATGATCATGACCATGACGGTGGGGTTTTAGGGTTTTTCCCTTTTGTGAGTGGTGAATTTAAGAAGGGGATTGAGAAGGGTTGCGAGGTTGGGGTGTTGGCTGGGATTGTTATGTGGGAAGCGCTTTTGCTAAAGCTCTGTTTGGCGTTCGAGAAAGGGATTGGCAGGGCGGAGCAGGAGAAGAAGCTCATGGCCTCCGCCGTTCAGACCATCACAGGGTTTCGGAGCTTTGGCTTCTTGGATGCCCTTTTCAGGATGATGTTGGAGCGAGTTTTGCCAGTGACCTCTCTACTGGGTTCTGAAAATGAAGTTCTTTTAAAAGAAGTCCTGTACAATTCTGTGATGATGATAGACTATTCATTCATTAATCCTCAAGCAGAATTTTTACTATATGCCAACAGCTTGAAAGATGTTGCTATAATTTGGTTGTTTGTTGCTGAGTTAGCAGTACAGTCTGCTAGGGAAAAAGGTGATCATGGGAAAGCTATGTCTTATATAAATGCCTTCTGTAGATCCTGCATACCCATTCAATTGATCAACTGGGTTACTAATCAAAATTGCGTAGGCAGAAAGATCACCAGACCAAATGTTTCCACTCCCATAGCTCTCATAAAGTGGCTTATTGTTGTTGAGGAACAAGGAATTGCAGTTTTTGCTGGTGAAACTGCCAAGCAGATAAACATCATGTTCAAAGCTAACTTTTTCACTTCAAGAACTGAGTGCTTGCTTCCAGTTATCAAACATTTCTTTAACAATCTGGATAAGAATCTCTATTTGAATTCTGTGAATGGAGAAGCCGGGGCAGATAAACTTGATGGTGATGTGGAGATGCTTGATACTGCAGACACTGTAAGTTTGCCTGCTGCTGATAGTGTGAACAGAGTTATTGATGGAACAAGAAAACGCAAAGAAGGGATTGAGGATGATACTAAAACACAGCTAAAGTATATGAGATGTCAATTTCATGAGAATTCAGTCAGAGAAAACTCGTTTATATTCAGGCAACAGTGA

Predicted protein sequences of Glyma14g10701

Limit To All Plant Sequences

>Glyma14g10701.1   sequence type=predicted peptide   gene model=Glyma14g10701   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MNLNHYHHHVPPYEHMLKESINRFFAEHRRGATDFADFTSIFSRMIHATPEPPIPLLWFYAALEFRATRDPSRRARDLFHLLVSCSGARGSTKQIAALAPLLFVLHRLALLQQGELLKTELNGLVEGVVSYCSICCGSEICRDDDVAVLEFGDLIKVWMVDDHDHDGGVLGFFPFVSGEFKKGIEKGCEVGVLAGIVMWEALLLKLCLAFEKGIGRAEQEKKLMASAVQTITGFRSFGFLDALFRMMLERVLPVTSLLGSENEVLLKEVLYNSVMMIDYSFINPQAEFLLYANSLKDVAIIWLFVAELAVQSAREKGDHGKAMSYINAFCRSCIPIQLINWVTNQNCVGRKITRPNVSTPIALIKWLIVVEEQGIAVFAGETAKQINIMFKANFFTSRTECLLPVIKHFFNNLDKNLYLNSVNGEAGADKLDGDVEMLDTADTVSLPAADSVNRVIDGTRKRKEGIEDDTKTQLKYMRCQFHENSVRENSFIFRQQ*

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