Glyma14g10633 - SoyBase

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Report for Sequence Feature Glyma14g10633

Feature Type:	gene_model
Chromosome:	Gm14
Start:	8837237
stop:	8842018
Source:	JGI
Version:	Wm82.a1.v1.1
High confidence:	yes

A newer version of this gene model can be found here:

Annotations for Glyma14g10633

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT3G20430	AT	Annotation by Michelle Graham. TAIR10: CONTAINS InterPro DOMAIN/s: Phosphorylated adapter RNA export protein, RNA-binding domain (InterPro:IPR019385); Has 110 Blast hits to 110 proteins in 51 species: Archae - 0; Bacteria - 3; Metazoa - 56; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). \| chr3:7121480-7123074 FORWARD LENGTH=265	SoyBase	E_val: 4.00E-63	ISS
GO:0008150	GO-bp	Annotation by Michelle Graham. GO Biological Process: biological process	SoyBase	N/A	ISS
GO:0005634	GO-cc	Annotation by Michelle Graham. GO Cellular Compartment: nucleus	SoyBase	N/A	ISS
GO:0003674	GO-mf	Annotation by Michelle Graham. GO Molecular Function: molecular function	SoyBase	N/A	ISS
PTHR13135	Panther	CYTOSOLIC RESINIFERATOXIN BINDING PROTEIN RBP-26	JGI		ISS
PF10258	PFAM	PHAX RNA-binding domain	JGI		ISS
UniRef100_G7JMS7	UniRef	Annotation by Michelle Graham. Most informative UniRef hit: DNA-directed RNA polymerase n=1 Tax=Medicago truncatula RepID=G7JMS7_MEDTR	SoyBase	E_val: 3.00E-77	ISS
UniRef100_I1M8Z9	UniRef	Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1M8Z9_SOYBN	SoyBase	E_val: 4.00E-95	ISS

Expression Patterns of Glyma14g10633

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma14g10633 not represented in the dataset	Glyma14g10633 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma14g10633 Gene Call Version Wm82.a1.v1.1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma.14g092900	Wm82.a2.v1	IGC	As supplied by JGI

References for Glyma14g10633

Schmutz et al. 2010
Genome sequence of the palaeopolyploid soybean
Nature 2010, 463:178-183

Transcripts of Glyma14g10633

Limit To All Plant Sequences

>Glyma14g10633.2   sequence type=transcript   gene model=Glyma14g10633   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
GGCCTTATAGCCCAGTGCATGAGGCTCCCATCTAATGGGGAAAGAGAAAGGTTGATGTACGCAACCTTTAAAAGTTGGAGGTTTGTGATAAATACATGTCGGCGTCTGAAAGAGAAAAAGTCATACATGGTGTATACAGCTGTTGCTTGCCTTGGAGTTTGTGCATTGAGTGATCTCATCAATGAGGTGGAGGCTATACAGGCTTGTGGAGGCCAGATGACTGTTGATGGTAGGCGATTTCGAACAGGGGGTGGTGTATTGTGGAGTATCATTAAGGTTCGCGAACCAAATGCTTACAAAGAGATAATAAAGAAAGCAAAGGAGTTTGAGAAGCAATTCAGGCAGCCAAATGTGAAGCAGCCACCTGTGCAAAAGAAAGAGGATTCTTTTCAAGGGGATGACACCTCTACATTTGCTAGCGGTCATCAGGGCACTGTTTCTGACAAATCCTTTTCTGCATTGCAAATGCAAGATCGACAACATAAACCATCAGGTTCTGAAGAGAAACGTAACTCTGTTCATGACAGATTAAGGATACATGTTTCTTATGATGATGATCTGCTTGGATTAAGTGCAGATAATGACACAGCCTGACCCTGGATGAAAAGAAACCTTCATCCTGTCACAGTTTTATTTTTCTTTCATCATAGATTGCAGTCTGCTGATGCAACTAATCCTCATTCTCCCTTTTTCACATTTTACATTACAACCTTCTGTCTTCTGTTCTATCTTTTTGCTCTTTCACCCTTGTTTCTTTTTTCTGTGAAATAAGTTCACAGATGGGGCAGTATTTTCTATTTGGATTTTGTTAGGAAGGATTTTGTCATGTGTTGAAAGGAGAGGGTATTTACTATTGCATAAGCTTTCTGATACACTTAAATGATAATAGAAAATATTATAATGGAAGTTTGTGTTAACT

>Glyma14g10633.3   sequence type=transcript   gene model=Glyma14g10633   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
GCGATATCAACACAGAGCGGCATGAATTGAACTGAAACAGAGATATCCTATAAAACAGAGAGACAGGGCTAGCTAGGTACAGAATACTGGTAGATAAACATAAAAACAAAACCTTTTATTTCATCGTTTTGCGTTTTGCGTGAAGATTATTAGAGTTGTTGGGTGCGCTTGATATGGAGAATGGGGAGAACATTCTCGATGCCATCTTCCAAGACGAAAACTTGGAGGACGATGTTGAGATGATTGACGTTGAAGAAGGGGAATTGGTTGAGCTGAACGATTCCCAAAACGGCGTCGTAGAGGCGGATAACAAAAAACCGCACAGTAAGAAGCGCAGGCGCAGAGGTAACAAGAGAAATAAGAAGAAGAATTCAGGAACAACCGGTGCCATTGACATTGACAGGTTTGTGATAAATACATGTCGGCGTCTGAAAGAGAAAAAGTCATACATGGTGTATACAGCTGTTGCTTGCCTTGGAGTTTGTGCATTGAGTGATCTCATCAATGAGATTTTACAGAGATCATTTCAATCTCCTGTCTGAGCTTTGATGTTCCTGGCTGATGAACCACTTCAATTATTTAATTATTTTGAAGGTGGAGGCTATACAGGCTTGTGGAGGCCAGATGACTGTTGATGGTAGGCGATTTCGAACAGGGGGTGGTGTATTGTGGAGTATCATTAAGGTTCGCGAACCAAATGCTTACAAAGAGATAATAAAGAAAGCAAAGGAGTTTGAGAAGCAATTCAGGCAGCCAAATGTGAAGCAGCCACCTGTGCAAAAGAAAGAGGATTCTTTTCAAGGGGATGACACCTCTACATTTGCTAGCGGTCATCAGGGCACTGTTTCTGACAAATCCTTTTCTGCATTGCAAATGCAAGATCGACAACATAAACCATCAGGTTCTGAAGAGAAACGTAACTCTGTTCATGACAGATTAAGGATACATGTTTCTTATGATGATGATCTGCTTGGATTAAGTGCAGATAATGACACAGCCTGACCCTGGATGAAAAGAAACCTTCATCCTGTCACAGTTTTATTTTTCTTTCATCATAGATTGCAGTCTGCTGATGCAACTAATCCTCATTCTCCCTTTTTCACATTTTACATTACAACCTTCTGTCTTCTGTTCTATCTTTTTGCTCTTTCACCCTTGTTTCTTTTTTCTGTGAAATAAGTTCACAGATGGGGCAGTATTTTCTATTTGGATTTTGTTAGGAAGGATTTTGTCATGTGTTGAAAGGAGAGGGTATTTACTATTGCATAAGCTTTCTGATACACTTAAATGATAATAGAAAATATTATAATGGAAGTTTGTGTTAACT

>Glyma14g10633.4   sequence type=transcript   gene model=Glyma14g10633   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
GGCCTTATAGCCCAGTGCATGAGGCTCCCATCTAATGGGGAAAGAGAAAGGTTGATGTACGCAACCTTTAAAAGTTGGAGGTTTGTGATAAATACATGTCGGCGTCTGAAAGAGAAAAAGTCATACATGGTGTATACAGCTGTTGCTTGCCTTGGAGTTTGTGCATTGAGTGATCTCATCAATGAGATTTTACAGAGATCATTTCAATCTCCTGTCTGAGCTTTGATGTTCCTGGCTGATGAACCACTTCAATTATTTAATTATTTTGAAGGTGGAGGCTATACAGGCTTGTGGAGGCCAGATGACTGTTGATGGTAGGCGATTTCGAACAGGGGGTGGTGTATTGTGGAGTATCATTAAGGTTCGCGAACCAAATGCTTACAAAGAGATAATAAAGAAAGCAAAGGAGTTTGAGAAGCAATTCAGGCAGCCAAATGTGAAGCAGCCACCTGTGCAAAAGAAAGAGGATTCTTTTCAAGGGGATGACACCTCTACATTTGCTAGCGGTCATCAGGGCACTGTTTCTGACAAATCCTTTTCTGCATTGCAAATGCAAGATCGACAACATAAACCATCAGGTTCTGAAGAGAAACGTAACTCTGTTCATGACAGATTAAGGATACATGTTTCTTATGATGATGATCTGCTTGGATTAAGTGCAGATAATGACACAGCCTGACCCTGGATGAAAAGAAACCTTCATCCTGTCACAGTTTTATTTTTCTTTCATCATAGATTGCAGTCTGCTGATGCAACTAATCCTCATTCTCCCTTTTTCACATTTTACATTACAACCTTCTGTCTTCTGTTCTATCTTTTTGCTCTTTCACCCTTGTTTCTTTTTTCTGTGAAATAAGTTCACAGATGGGGCAGTATTTTCTATTTGGATTTTGTTAGGAAGGATTTTGTCATGTGTTGAAAGGAGAGGGTATTTACTATTGCATAAGCTTTCTGATACACTTAAATGATAATAGAAAATATTATAATGGAAGTTTGTGTTAACT

Coding sequences of Glyma14g10633

Limit To All Plant Sequences

>Glyma14g10633.1   sequence type=CDS   gene model=Glyma14g10633   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGAGAATGGGGAGAACATTCTCGATGCCATCTTCCAAGACGAAAACTTGGAGGACGATGTTGAGATGATTGACGTTGAAGAAGGGGAATTGGTTGAGCTGAACGATTCCCAAAACGGCGTCGTAGAGGCGGATAACAAAAAACCGCACAGTAAGAAGCGCAGGCGCAGAGGTAACAAGAGAAATAAGAAGAAGAATTCAGGAACAACCGGTGCCATTGACATTGACAGGTTTGTGATAAATACATGTCGGCGTCTGAAAGAGAAAAAGTCATACATGGTGTATACAGCTGTTGCTTGCCTTGGAGTTTGTGCATTGAGTGATCTCATCAATGAGGTGGAGGCTATACAGGCTTGTGGAGGCCAGATGACTGTTGATGGTAGGCGATTTCGAACAGGGGGTGGTGTATTGTGGAGTATCATTAAGGTTCGCGAACCAAATGCTTACAAAGAGATAATAAAGAAAGCAAAGGAGTTTGAGAAGCAATTCAGGCAGCCAAATGTGAAGCAGCCACCTGTGCAAAAGAAAGAGGATTCTTTTCAAGGGGATGACACCTCTACATTTGCTAGCGGTCATCAGGGCACTGTTTCTGACAAATCCTTTTCTGCATTGCAAATGCAAGATCGACAACATAAACCATCAGGTTCTGAAGAGAAACGTAACTCTGTTCATGACAGATTAAGGATACATGTTTCTTATGATGATGATCTGCTTGGATTAAGTGCAGATAATGACACAGCCTGA

>Glyma14g10633.2   sequence type=CDS   gene model=Glyma14g10633   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGAGGCTCCCATCTAATGGGGAAAGAGAAAGGTTGATGTACGCAACCTTTAAAAGTTGGAGGTTTGTGATAAATACATGTCGGCGTCTGAAAGAGAAAAAGTCATACATGGTGTATACAGCTGTTGCTTGCCTTGGAGTTTGTGCATTGAGTGATCTCATCAATGAGGTGGAGGCTATACAGGCTTGTGGAGGCCAGATGACTGTTGATGGTAGGCGATTTCGAACAGGGGGTGGTGTATTGTGGAGTATCATTAAGGTTCGCGAACCAAATGCTTACAAAGAGATAATAAAGAAAGCAAAGGAGTTTGAGAAGCAATTCAGGCAGCCAAATGTGAAGCAGCCACCTGTGCAAAAGAAAGAGGATTCTTTTCAAGGGGATGACACCTCTACATTTGCTAGCGGTCATCAGGGCACTGTTTCTGACAAATCCTTTTCTGCATTGCAAATGCAAGATCGACAACATAAACCATCAGGTTCTGAAGAGAAACGTAACTCTGTTCATGACAGATTAAGGATACATGTTTCTTATGATGATGATCTGCTTGGATTAAGTGCAGATAATGACACAGCCTGA

>Glyma14g10633.3   sequence type=CDS   gene model=Glyma14g10633   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGAACCACTTCAATTATTTAATTATTTTGAAGGTGGAGGCTATACAGGCTTGTGGAGGCCAGATGACTGTTGATGGTAGGCGATTTCGAACAGGGGGTGGTGTATTGTGGAGTATCATTAAGGTTCGCGAACCAAATGCTTACAAAGAGATAATAAAGAAAGCAAAGGAGTTTGAGAAGCAATTCAGGCAGCCAAATGTGAAGCAGCCACCTGTGCAAAAGAAAGAGGATTCTTTTCAAGGGGATGACACCTCTACATTTGCTAGCGGTCATCAGGGCACTGTTTCTGACAAATCCTTTTCTGCATTGCAAATGCAAGATCGACAACATAAACCATCAGGTTCTGAAGAGAAACGTAACTCTGTTCATGACAGATTAAGGATACATGTTTCTTATGATGATGATCTGCTTGGATTAAGTGCAGATAATGACACAGCCTGA

>Glyma14g10633.4   sequence type=CDS   gene model=Glyma14g10633   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGAACCACTTCAATTATTTAATTATTTTGAAGGTGGAGGCTATACAGGCTTGTGGAGGCCAGATGACTGTTGATGGTAGGCGATTTCGAACAGGGGGTGGTGTATTGTGGAGTATCATTAAGGTTCGCGAACCAAATGCTTACAAAGAGATAATAAAGAAAGCAAAGGAGTTTGAGAAGCAATTCAGGCAGCCAAATGTGAAGCAGCCACCTGTGCAAAAGAAAGAGGATTCTTTTCAAGGGGATGACACCTCTACATTTGCTAGCGGTCATCAGGGCACTGTTTCTGACAAATCCTTTTCTGCATTGCAAATGCAAGATCGACAACATAAACCATCAGGTTCTGAAGAGAAACGTAACTCTGTTCATGACAGATTAAGGATACATGTTTCTTATGATGATGATCTGCTTGGATTAAGTGCAGATAATGACACAGCCTGA

Predicted protein sequences of Glyma14g10633

Limit To All Plant Sequences

>Glyma14g10633.1   sequence type=predicted peptide   gene model=Glyma14g10633   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MENGENILDAIFQDENLEDDVEMIDVEEGELVELNDSQNGVVEADNKKPHSKKRRRRGNKRNKKKNSGTTGAIDIDRFVINTCRRLKEKKSYMVYTAVACLGVCALSDLINEVEAIQACGGQMTVDGRRFRTGGGVLWSIIKVREPNAYKEIIKKAKEFEKQFRQPNVKQPPVQKKEDSFQGDDTSTFASGHQGTVSDKSFSALQMQDRQHKPSGSEEKRNSVHDRLRIHVSYDDDLLGLSADNDTA*

>Glyma14g10633.2   sequence type=predicted peptide   gene model=Glyma14g10633   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MRLPSNGERERLMYATFKSWRFVINTCRRLKEKKSYMVYTAVACLGVCALSDLINEVEAIQACGGQMTVDGRRFRTGGGVLWSIIKVREPNAYKEIIKKAKEFEKQFRQPNVKQPPVQKKEDSFQGDDTSTFASGHQGTVSDKSFSALQMQDRQHKPSGSEEKRNSVHDRLRIHVSYDDDLLGLSADNDTA*

>Glyma14g10633.3   sequence type=predicted peptide   gene model=Glyma14g10633   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MNHFNYLIILKVEAIQACGGQMTVDGRRFRTGGGVLWSIIKVREPNAYKEIIKKAKEFEKQFRQPNVKQPPVQKKEDSFQGDDTSTFASGHQGTVSDKSFSALQMQDRQHKPSGSEEKRNSVHDRLRIHVSYDDDLLGLSADNDTA*

>Glyma14g10633.4   sequence type=predicted peptide   gene model=Glyma14g10633   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MNHFNYLIILKVEAIQACGGQMTVDGRRFRTGGGVLWSIIKVREPNAYKEIIKKAKEFEKQFRQPNVKQPPVQKKEDSFQGDDTSTFASGHQGTVSDKSFSALQMQDRQHKPSGSEEKRNSVHDRLRIHVSYDDDLLGLSADNDTA*

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