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Report for Sequence Feature Glyma14g10310

Feature Type:gene_model
Chromosome:Gm14
Start:8468836
stop:8473145
Source:JGI
Version:Wm82.a1.v1.1
High confidence:yes



A newer version of this gene model can be found here:

Annotations for Glyma14g10310
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT3G49720AT Annotation by Michelle Graham. TAIR10: unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, Golgi apparatus, plasma membrane, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G65810.1); Has 64 Blast hits to 64 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BL SoyBaseE_val: 6.00E-125ISS
GO:0008150GO-bp Annotation by Michelle Graham. GO Biological Process: biological process SoyBaseN/AISS
GO:0005768GO-cc Annotation by Michelle Graham. GO Cellular Compartment: endosome SoyBaseN/AISS
GO:0005774GO-cc Annotation by Michelle Graham. GO Cellular Compartment: vacuolar membrane SoyBaseN/AISS
GO:0005794GO-cc Annotation by Michelle Graham. GO Cellular Compartment: Golgi apparatus SoyBaseN/AISS
GO:0005802GO-cc Annotation by Michelle Graham. GO Cellular Compartment: trans-Golgi network SoyBaseN/AISS
GO:0005886GO-cc Annotation by Michelle Graham. GO Cellular Compartment: plasma membrane SoyBaseN/AISS
GO:0009535GO-cc Annotation by Michelle Graham. GO Cellular Compartment: chloroplast thylakoid membrane SoyBaseN/AISS
GO:0016020GO-cc Annotation by Michelle Graham. GO Cellular Compartment: membrane SoyBaseN/AISS
GO:0003674GO-mf Annotation by Michelle Graham. GO Molecular Function: molecular function SoyBaseN/AISS
UniRef100_I1M8X5UniRef Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1M8X5_SOYBN SoyBaseE_val: 0ISS
UniRef100_Q9FH88UniRef Annotation by Michelle Graham. Most informative UniRef hit: Emb|CAB66910.1 n=1 Tax=Arabidopsis thaliana RepID=Q9FH88_ARATH SoyBaseE_val: 1.00E-89ISS

Expression Patterns of Glyma14g10310
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma14g10310 Gene Call Version Wm82.a1.v1.1
Corresponding NameAnnotation VersionEvidenceComments
Glyma.14g090600 Wm82.a2.v1IGC As supplied by JGI

References for Glyma14g10310
Schmutz et al. 2010
  Genome sequence of the palaeopolyploid soybean
  Nature 2010, 463:178-183

Coding sequences of Glyma14g10310
>Glyma14g10310.1   sequence type=CDS   gene model=Glyma14g10310   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGTCGAGGAGACCGGGGAATCCTACTAGAAGGTTCGGTGACAATGGCGGTGGATTGTTCTCTTCGAAATCTAGGTCGCCACCGGTTTTGTCTATTGCGCTTGTAATTGTGGGAGGTTTGTTTCTCATTGGCTATATGTATAGAGGCTCAGGTGGATCTAGCAGCCGTATAGATTCTGTTAGCAGGGTTGAAGGTGATTATTTGTGCAGTGGAGAGGTCCAACAAGCAATTCCCCTTTTACAGAAAGCATATGGAGATAGCATGCATAAAGTTTTGCATGTTGGTCCTGATACTTGTTATGTGGTCTCTAAATTGCTGAAGGAGGATGAAACTGACGCCTGGGGAATAGAACCATATGATATAGAGGATGCTGATAATAATTGCAAAGCACTTATACGTAGAGGCAGTGTGCGTGTGTCTGATATCAAGTTTCCTCTTCCATACAGGCCAAAATCTTTCTCTCTTGTAATTGTTTCAGATGCTCTGGATTACCTGTCTCCCAGATACCTCAATAAAACTCTTCCAGATTTGGTGAGGGTAGCATCTGATGGTGTAGTGATATTTACTGGTTTTCCCACCACTCAAAAGGCCAAGGTAGCGGATGTTTCTAAATTTGGAAAAGCGGCCAAGATGAGGAGTTCATCCTGGTGGGTCAAGTTTTTCCTCCAGATTAACTTAGAGGAGAATGAAGCTGCTGTTAAGAAGTTTGAACTGGCTTCATCCAAGAGTTCATATGTTCCGAAATGCCAGATATTCCACTTGAAGTCACTCCATTGA
Predicted protein sequences of Glyma14g10310
>Glyma14g10310.1   sequence type=predicted peptide   gene model=Glyma14g10310   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MSRRPGNPTRRFGDNGGGLFSSKSRSPPVLSIALVIVGGLFLIGYMYRGSGGSSSRIDSVSRVEGDYLCSGEVQQAIPLLQKAYGDSMHKVLHVGPDTCYVVSKLLKEDETDAWGIEPYDIEDADNNCKALIRRGSVRVSDIKFPLPYRPKSFSLVIVSDALDYLSPRYLNKTLPDLVRVASDGVVIFTGFPTTQKAKVADVSKFGKAAKMRSSSWWVKFFLQINLEENEAAVKKFELASSKSSYVPKCQIFHLKSLH*






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