Glyma14g09720 - SoyBase

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Report for Sequence Feature Glyma14g09720

Feature Type:	gene_model
Chromosome:	Gm14
Start:	7783126
stop:	7789941
Source:	JGI
Version:	Wm82.a1.v1.1
High confidence:	yes

A newer version of this gene model can be found here:

Annotations for Glyma14g09720

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT1G49890	AT	Annotation by Michelle Graham. TAIR10: Family of unknown function (DUF566) \| chr1:18470282-18473463 FORWARD LENGTH=659	SoyBase	E_val: 1.00E-122	ISS
GO:0005634	GO-cc	Annotation by Michelle Graham. GO Cellular Compartment: nucleus	SoyBase	N/A	ISS
PF04484	PFAM	Family of unknown function (DUF566)	JGI		ISS
UniRef100_Q9LJN9	UniRef	Annotation by Michelle Graham. Most informative UniRef hit: Emb\|CAB52444.1 n=1 Tax=Arabidopsis thaliana RepID=Q9LJN9_ARATH	SoyBase	E_val: 2.00E-109	ISS
UniRef100_UPI000233B593	UniRef	Annotation by Michelle Graham. Best UniRef hit: UPI000233B593 related cluster n=1 Tax=unknown RepID=UPI000233B593	SoyBase	E_val: 0	ISS

Expression Patterns of Glyma14g09720

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology


Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Paralogs of Glyma14g09720

Paralog	Evidence	Comments
Glyma17g35450	IGC	Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.3.

Gene model name correspondences to Glyma14g09720 Gene Call Version Wm82.a1.v1.1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma.14g087900	Wm82.a2.v1	IGC	As supplied by JGI

References for Glyma14g09720

Schmutz et al. 2010
Genome sequence of the palaeopolyploid soybean
Nature 2010, 463:178-183

Transcripts of Glyma14g09720

Limit To All Plant Sequences

>Glyma14g09720.2   sequence type=transcript   gene model=Glyma14g09720   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
AAACACCTCAACCTCCAGTCCCACGAAAGCACCGCAAACTGACGTAAACCATTGTACATTTACGAAACTGCCCCTAAAGTCACGGCGAGTGCATTTATTCTCCCCAACACCGCGCGTACGTGTGCCACAGTGTCAGCGTCACTCTAATGGTGGCTGAGCTTGCTCCCTCTAATTTTTCCCAATCGCGCACACACTGCTACGACAGTTACACTCCTTATACTCGGTCAAGCCCCGGCAAATCGTAACGGTCATATTTCCCCTTCCAACACCAATTTTGTTTATTCCCTCACATTGAATTCTGTTCAATACTTCATGGAACTTGTTCGTTTTTTCATGCCATTTTTAGGGTTCTGCGACTCATCGTGATTTCCAATGATGAATTTTGAGTCTCGAATTTGATTATTATGGAATAATATTAATGTTACTGCTGGTACAATTTTAGAATTGGAATTTTGGAATAAGTAAGAACAATGGTGGCTGCAATTTCTACGGCGATAAACCCCAAGCGAGCGCTGACGCCAACTCCAAGAAGAACACCTTTGTTACCTTCTGAATCGGACAATGCACTCGCTCCACCACGCAGGCCCAAAGCACGAGAAGTTACTTCTCGCTACATGTCTTCTTCTTCGTCTTCGTCTTCCTCCGTTTCGTCTCCTCCGAGACGATGCCAGTCGCCGCTGGTGGTGACGAGGACGCTGAATTCTGCAAAACCGAAGCAAACGCCGACTCCGACTCCGACTCCGACGCCGTTTGCGAAGCGGTCTCAGTCGGTGGAGCGCCGGCGACAGGCTACTCCACGACCTAACGGAACGGAAGCTCCGGCTGCTCAGAAAATGCTCTTCACTTCCACCAGGAGCTTGTCCGTCTCGTTCCAGGGCGAATCGTTCCCGATCCAGGTCAGAACGACGAAACCGCCGTCGTCGCATAGTTTACGGAAGAGCACGCCGGAGAGAAGGAAGGTTTCAACGACGCCAACGCCGGTGAGAAACGGCAATTCGGATCACACCGAGAACGCCAGGTCACTAGATCGGCACCGGTGGCCGGCAAAATCTCAACCGCCGCGAGAATGTGCTGATTCCGCTGCGAGAAAACAAACTGACGCGCCGGCGAGCGTGGCTAGGTCGTTGCAGAATGTCATGGCGGACTTTCGAGGTTCTCACGACGCGACGACGCAGAGATCGGAGAGCTACAAAACTAGCGGATCTGAGTTTCAGCACGAGGCTGATCCTGTTGCTTCTGATACCGAAAGCGTAACCTCTGGAAGTTCCTCTGGAGAAGGAATTCGAGGTTCTCGGGGACTCGTGGTGCCGGCGAGGTTCTGGCAAGAGCATCATAATAACCGTTTGCGGCGCCAAACGGAAACTCCGTCTTCTAGAAACGGCGTAATTGGAAACAAAGGAACGGTTAATACTCCTATTCCTAGTTCTAGACTTCTGGTGCAGAAGAAAACGGCGTTGGATTGTCCTGTTTCGTCGCCACGTGGAGTTCTGAATAGCCGTGCTCTTCAAGGTTCTCCGATTCGTTCCGCGGTACGTCCGGCGTCTCCAAGTAAGCTAGCGACGACGCCGTCGTCGGTGTGGTCTCCTTCGAGAGGAGTGAGTCCGTCACGAGCGCAAAACGGCGTCGTTGGTGGCGTGAGTAGTAGTAGGTTCGGTGCTAGTGAACCTTCTGTTTTGAGTTTCGCTGTTGATGTTTCGAGGGGGAAGGTAGCGGAGAACCGGATTTTTGATGCGCATTTATTGAGACTCTTCCATAACAGGCTTCTTCAGTGGCGTTTTGTTAACGCCAGAGCTGATGCTGCTCTCTCTGCGCAGACATTGAATGCGGAGAAAAGCCTCTATGATGCATGGGTTGCTATGTCCAATCTACGAGAATCTGTTAGAGCCAAAAGAGCAGAGTTTCAGTTGCTGAAGCAACAGTTCAAGTTAATATCCATCCTGAAGGATCAAATGGTGTGTTTGGAAGATTGGGCTACTTTGGATCCGGTTTACTCTAGTTCACTTTCAGGAGCTACTGAAGCCCTAAGGGCTAGCACTCTTCGTCTTCCTGTAGTTGGTGGGGCCAAGACAGATTTGGTAAATTTGAAGGACGCAATTAGTTCAGCAATGGATGTGATGCAGGCAATGGCGTCCTCCATATGCCTATTGTCGCCAAAGGTTGGGCAATTAAATTCGCTGGTTGTTGAAGTTGCCAACTTAACTGCGAAGGAGCGTGTTTTGCTTGAAGAGTGCAAAGACCTTTTGTCAGTGATTACAACCATGCAGGTTAGAGAGTGTAGCCTGAGAACGCATGTTGCTCAACTGAAATGCCAACCGTGAAGTACTACAGTGAAAATAACAAGTAATACATTGGCTGACTAGCATACTTTCAGTGCTAACATCATAACATAGGAATGGTAATTTCGGCCTTGAATTCAATACATGAAATGAAATCATCATTATTGATTGAGTAAAGCTAGTTAGTATTTGAAAAAACAAAACAAAAAAAATCTACAGATAGCACGAATATCCTGGTCAAACAGGATTTCATCATATTGTACAAAGAAATTCGTAAAAAGTAGTTGCTCTCTGATTGGTTACACGCTAAGAGTGAGGGTTGAAACTTGTCGTTCGGGAGTTTCTATACAATTTTTTCTTTAAAAAAAAAATCCTTGCCCATTTGTCTTTTTTGTTAAAGGATGTACATAAACTGTGTATCATTTTTTTTTGTTTGTATTTGTGTGTATTAGCTTATGGAAAAAAATATGTAGTCAAAATGTGGATACGATTTGCTCTATATAAACCTTTTTCTACGACTTGCCCTTAGAAAATTACGCTTGTTTTGAGTTCTCTCACTCACATCCTCGTCATTTAAAATTAGGCAACAAATTTAACCGTTATTATACTATATAAAGTAGTAGTGTAAATTACTTTTGTATTTTTCTGAGCTTTTATAGTCCCT

Coding sequences of Glyma14g09720

Limit To All Plant Sequences

>Glyma14g09720.1   sequence type=CDS   gene model=Glyma14g09720   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGTGGCTGCAATTTCTACGGCGATAAACCCCAAGCGAGCGCTGACGCCAACTCCAAGAAGAACACCTTTGTTACCTTCTGAATCGGACAATGCACTCGCTCCACCACGCAGGCCCAAAGCACGAGAAGTTACTTCTCGCTACATGTCTTCTTCTTCGTCTTCGTCTTCCTCCGTTTCGTCTCCTCCGAGACGATGCCAGTCGCCGCTGGTGGTGACGAGGACGCTGAATTCTGCAAAACCGAAGCAAACGCCGACTCCGACTCCGACTCCGACGCCGTTTGCGAAGCGGTCTCAGTCGGTGGAGCGCCGGCGACAGGCTACTCCACGACCTAACGGAACGGAAGCTCCGGCTGCTCAGAAAATGCTCTTCACTTCCACCAGGAGCTTGTCCGTCTCGTTCCAGGGCGAATCGTTCCCGATCCAGGTCAGAACGACGAAACCGCCGTCGTCGCATAGTTTACGGAAGAGCACGCCGGAGAGAAGGAAGGTTTCAACGACGCCAACGCCGGTGAGAAACGGCAATTCGGATCACACCGAGAACGCCAGGTCACTAGATCGGCACCGGTGGCCGGCAAAATCTCAACCGCCGCGAGAATGTGCTGATTCCGCTGCGAGAAAACAAACTGACGCGCCGGCGAGCGTGGCTAGGTCGTTGCAGAATGTCATGGCGGACTTTCGAGGTTCTCACGACGCGACGACGCAGAGATCGGAGAGCTACAAAACTAGCGGATCTGAGTTTCAGCACGAGGCTGATCCTGTTGCTTCTGATACCGAAAGCGTAACCTCTGGAAGTTCCTCTGGAGAAGGAATTCGAGGTTCTCGGGGACTCGTGGTGCCGGCGAGGTTCTGGCAAGAGCATCATAATAACCGTTTGCGGCGCCAAACGGAAACTCCGTCTTCTAGAAACGGCGTAATTGGAAACAAAGGAACGGTTAATACTCCTATTCCTAGTTCTAGACTTCTGGTGCAGAAGAAAACGGCGTTGGATTGTCCTGTTTCGTCGCCACGTGGAGTTCTGAATAGCCGTGCTCTTCAAGGTTCTCCGATTCGTTCCGCGGTACGTCCGGCGTCTCCAAGTAAGCTAGCGACGACGCCGTCGTCGGTGTGGTCTCCTTCGAGAGGAGTGAGTCCGTCACGAGCGCAAAACGGCGTCGTTGGTGGCGTGAGTAGTAGTAGGTTCGGTGCTAGTGAACCTTCTGTTTTGAGTTTCGCTGTTGATGTTTCGAGGGGGAAGGTAGCGGAGAACCGGATTTTTGATGCGCATTTATTGAGACTCTTCCATAACAGGCTTCTTCAGTGGCGTTTTGTTAACGCCAGAGCTGATGCTGCTCTCTCTGCGCAGACATTGAATGCGGAGAAAAGCCTCTATGATGCATGGGTTGCTATGTCCAATCTACGAGAATCTGTTAGAGCCAAAAGAGCAGAGTTTCAGTTGCTGAAGCAACAGTTCAAGTTAATATCCATCCTGAAGGATCAAATGGTGTGTTTGGAAGATTGGGCTACTTTGGATCCGGTTTACTCTAGTTCACTTTCAGGAGCTACTGAAGCCCTAAGGGCTAGCACTCTTCGTCTTCCTGTAGTTGGTGGGGCCAAGATTTGGTAA

>Glyma14g09720.2   sequence type=CDS   gene model=Glyma14g09720   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGTGGCTGCAATTTCTACGGCGATAAACCCCAAGCGAGCGCTGACGCCAACTCCAAGAAGAACACCTTTGTTACCTTCTGAATCGGACAATGCACTCGCTCCACCACGCAGGCCCAAAGCACGAGAAGTTACTTCTCGCTACATGTCTTCTTCTTCGTCTTCGTCTTCCTCCGTTTCGTCTCCTCCGAGACGATGCCAGTCGCCGCTGGTGGTGACGAGGACGCTGAATTCTGCAAAACCGAAGCAAACGCCGACTCCGACTCCGACTCCGACGCCGTTTGCGAAGCGGTCTCAGTCGGTGGAGCGCCGGCGACAGGCTACTCCACGACCTAACGGAACGGAAGCTCCGGCTGCTCAGAAAATGCTCTTCACTTCCACCAGGAGCTTGTCCGTCTCGTTCCAGGGCGAATCGTTCCCGATCCAGGTCAGAACGACGAAACCGCCGTCGTCGCATAGTTTACGGAAGAGCACGCCGGAGAGAAGGAAGGTTTCAACGACGCCAACGCCGGTGAGAAACGGCAATTCGGATCACACCGAGAACGCCAGGTCACTAGATCGGCACCGGTGGCCGGCAAAATCTCAACCGCCGCGAGAATGTGCTGATTCCGCTGCGAGAAAACAAACTGACGCGCCGGCGAGCGTGGCTAGGTCGTTGCAGAATGTCATGGCGGACTTTCGAGGTTCTCACGACGCGACGACGCAGAGATCGGAGAGCTACAAAACTAGCGGATCTGAGTTTCAGCACGAGGCTGATCCTGTTGCTTCTGATACCGAAAGCGTAACCTCTGGAAGTTCCTCTGGAGAAGGAATTCGAGGTTCTCGGGGACTCGTGGTGCCGGCGAGGTTCTGGCAAGAGCATCATAATAACCGTTTGCGGCGCCAAACGGAAACTCCGTCTTCTAGAAACGGCGTAATTGGAAACAAAGGAACGGTTAATACTCCTATTCCTAGTTCTAGACTTCTGGTGCAGAAGAAAACGGCGTTGGATTGTCCTGTTTCGTCGCCACGTGGAGTTCTGAATAGCCGTGCTCTTCAAGGTTCTCCGATTCGTTCCGCGGTACGTCCGGCGTCTCCAAGTAAGCTAGCGACGACGCCGTCGTCGGTGTGGTCTCCTTCGAGAGGAGTGAGTCCGTCACGAGCGCAAAACGGCGTCGTTGGTGGCGTGAGTAGTAGTAGGTTCGGTGCTAGTGAACCTTCTGTTTTGAGTTTCGCTGTTGATGTTTCGAGGGGGAAGGTAGCGGAGAACCGGATTTTTGATGCGCATTTATTGAGACTCTTCCATAACAGGCTTCTTCAGTGGCGTTTTGTTAACGCCAGAGCTGATGCTGCTCTCTCTGCGCAGACATTGAATGCGGAGAAAAGCCTCTATGATGCATGGGTTGCTATGTCCAATCTACGAGAATCTGTTAGAGCCAAAAGAGCAGAGTTTCAGTTGCTGAAGCAACAGTTCAAGTTAATATCCATCCTGAAGGATCAAATGGTGTGTTTGGAAGATTGGGCTACTTTGGATCCGGTTTACTCTAGTTCACTTTCAGGAGCTACTGAAGCCCTAAGGGCTAGCACTCTTCGTCTTCCTGTAGTTGGTGGGGCCAAGACAGATTTGGTAAATTTGAAGGACGCAATTAGTTCAGCAATGGATGTGATGCAGGCAATGGCGTCCTCCATATGCCTATTGTCGCCAAAGGTTGGGCAATTAAATTCGCTGGTTGTTGAAGTTGCCAACTTAACTGCGAAGGAGCGTGTTTTGCTTGAAGAGTGCAAAGACCTTTTGTCAGTGATTACAACCATGCAGGTTAGAGAGTGTAGCCTGAGAACGCATGTTGCTCAACTGAAATGCCAACCGTGA

Predicted protein sequences of Glyma14g09720

Limit To All Plant Sequences

>Glyma14g09720.1   sequence type=predicted peptide   gene model=Glyma14g09720   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MVAAISTAINPKRALTPTPRRTPLLPSESDNALAPPRRPKAREVTSRYMSSSSSSSSSVSSPPRRCQSPLVVTRTLNSAKPKQTPTPTPTPTPFAKRSQSVERRRQATPRPNGTEAPAAQKMLFTSTRSLSVSFQGESFPIQVRTTKPPSSHSLRKSTPERRKVSTTPTPVRNGNSDHTENARSLDRHRWPAKSQPPRECADSAARKQTDAPASVARSLQNVMADFRGSHDATTQRSESYKTSGSEFQHEADPVASDTESVTSGSSSGEGIRGSRGLVVPARFWQEHHNNRLRRQTETPSSRNGVIGNKGTVNTPIPSSRLLVQKKTALDCPVSSPRGVLNSRALQGSPIRSAVRPASPSKLATTPSSVWSPSRGVSPSRAQNGVVGGVSSSRFGASEPSVLSFAVDVSRGKVAENRIFDAHLLRLFHNRLLQWRFVNARADAALSAQTLNAEKSLYDAWVAMSNLRESVRAKRAEFQLLKQQFKLISILKDQMVCLEDWATLDPVYSSSLSGATEALRASTLRLPVVGGAKIW*

>Glyma14g09720.2   sequence type=predicted peptide   gene model=Glyma14g09720   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MVAAISTAINPKRALTPTPRRTPLLPSESDNALAPPRRPKAREVTSRYMSSSSSSSSSVSSPPRRCQSPLVVTRTLNSAKPKQTPTPTPTPTPFAKRSQSVERRRQATPRPNGTEAPAAQKMLFTSTRSLSVSFQGESFPIQVRTTKPPSSHSLRKSTPERRKVSTTPTPVRNGNSDHTENARSLDRHRWPAKSQPPRECADSAARKQTDAPASVARSLQNVMADFRGSHDATTQRSESYKTSGSEFQHEADPVASDTESVTSGSSSGEGIRGSRGLVVPARFWQEHHNNRLRRQTETPSSRNGVIGNKGTVNTPIPSSRLLVQKKTALDCPVSSPRGVLNSRALQGSPIRSAVRPASPSKLATTPSSVWSPSRGVSPSRAQNGVVGGVSSSRFGASEPSVLSFAVDVSRGKVAENRIFDAHLLRLFHNRLLQWRFVNARADAALSAQTLNAEKSLYDAWVAMSNLRESVRAKRAEFQLLKQQFKLISILKDQMVCLEDWATLDPVYSSSLSGATEALRASTLRLPVVGGAKTDLVNLKDAISSAMDVMQAMASSICLLSPKVGQLNSLVVEVANLTAKERVLLEECKDLLSVITTMQVRECSLRTHVAQLKCQP*

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