Report for Sequence Feature Glyma14g09240
Feature Type: gene_model
Chromosome: Gm14
Start: 7281292
stop: 7285059
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma14g09240
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT1G32510 AT
Annotation by Michelle Graham. TAIR10: NAC domain containing protein 11 | chr1:11757000-11758118 FORWARD LENGTH=283
SoyBase E_val: 3.00E-22 ISS
GO:0006355 GO-bp
Annotation by Michelle Graham. GO Biological Process: regulation of transcription, DNA-dependent
SoyBase N/A ISS
GO:0005634 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: nucleus
SoyBase N/A ISS
GO:0003677 GO-mf
Annotation by Michelle Graham. GO Molecular Function: DNA binding
SoyBase N/A ISS
GO:0003700 GO-mf
Annotation by Michelle Graham. GO Molecular Function: sequence-specific DNA binding transcription factor activity
SoyBase N/A ISS
PF02365 PFAM
No apical meristem (NAM) protein
JGI ISS
UniRef100_B9R794 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9R794_RICCO
SoyBase E_val: 2.00E-70 ISS
UniRef100_I1M8N8 UniRef
Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1M8N8_SOYBN
SoyBase E_val: 0 ISS
Expression Patterns of Glyma14g09240
Gene expression representations made with eFP at the University of Toronto. Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE Paralogs of Glyma14g09240
Paralog Evidence Comments
Glyma17g35930 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.3.
Gene model name correspondences to Glyma14g09240 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.14g084300 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma14g09240
Coding sequences of Glyma14g09240
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma14g09240.1 sequence type=CDS gene model=Glyma14g09240 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGGAAGACCGCGCGCATGCTGCACTTCCTCCCGGTTACCGGTTCTACCCTTCCGAAGAGGTTCTCGTCGGTTATTACTTAACCAAGAAGAACGAGAACCGGGAGGAGGGTTTCTACGGTTCTGATTTGATCAGAGAACTTGACCTCTACGATCACGACCCCTTCGAATTACCGGACGCTGCGTGCTTTTCGTACGGTTACAAAGGGAGGAAGAAGCATTGGTTTTGTTACGCTAAAGAGACGAAACGCAGAAACAGAAAAAGAAAGGTGAAAAGCGGGTTCTGGCTCCGAAAGGGAAGGGTTCGGGATATTTGCGACAACCGCGACGACGTCGTTTTGGCCACGATGACGCGTTTCGTCTTCTACGTCGGCAATTCCCTGAAAAACGCTGCCAGAACCGATTGGATTTTGTACGAATATGCATTAGTTGACCGCGTTCTGGCTTCATTCGTGCTTTGCCGTGTGGTGAGTAAGCCTCCTCATCAGAATAGTCCGTCGGAGATTGGTCTGAGTTGTTGTGCTGAGGAGAGCGTTGGGGTGGCGGTGCGTCAGGTTGGTGTTCAGTGTGATGGATGTGCCGAAAGTGATGTTGTTGAAGCTAAGGTGTGCGATGATGGCTTTGTTAATAGAGAGAATGAGATTGCTGAGAATCCAATTAGGTGTGGTGGTGAGCATGGTGATCCAGCTGCACCTGTTTCAGTTGCTCCTGGAAGTCAGCCGGAAAGGCTTTCTGGACTTCCCAGTGGCAGTGCATTGTTTGTAGAAGCTATGACATCTCAGCAACTTATGCTTTCCATTCAAGAGGAGGATTTCATAGAATTGAATGATATTGCATGA
Predicted protein sequences of Glyma14g09240
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma14g09240.1 sequence type=predicted peptide gene model=Glyma14g09240 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MEDRAHAALPPGYRFYPSEEVLVGYYLTKKNENREEGFYGSDLIRELDLYDHDPFELPDAACFSYGYKGRKKHWFCYAKETKRRNRKRKVKSGFWLRKGRVRDICDNRDDVVLATMTRFVFYVGNSLKNAARTDWILYEYALVDRVLASFVLCRVVSKPPHQNSPSEIGLSCCAEESVGVAVRQVGVQCDGCAESDVVEAKVCDDGFVNRENEIAENPIRCGGEHGDPAAPVSVAPGSQPERLSGLPSGSALFVEAMTSQQLMLSIQEEDFIELNDIA*
SoyBase
SoyBase transitions to NEW site on 10/1/2024
