Report for Sequence Feature Glyma14g08970
Feature Type: gene_model
Chromosome: Gm14
Start: 6971485
stop: 6973117
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma14g08970
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT1G47410 AT
Annotation by Michelle Graham. TAIR10: unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages. | chr1:17394818-17395508 FORWARD LENGTH=189
SoyBase E_val: 4.00E-31 ISS
GO:0008150 GO-bp
Annotation by Michelle Graham. GO Biological Process: biological process
SoyBase N/A ISS
GO:0010413 GO-bp
Annotation by Michelle Graham. GO Biological Process: glucuronoxylan metabolic process
SoyBase N/A ISS
GO:0016926 GO-bp
Annotation by Michelle Graham. GO Biological Process: protein desumoylation
SoyBase N/A ISS
GO:0042546 GO-bp
Annotation by Michelle Graham. GO Biological Process: cell wall biogenesis
SoyBase N/A ISS
GO:0044036 GO-bp
Annotation by Michelle Graham. GO Biological Process: cell wall macromolecule metabolic process
SoyBase N/A ISS
GO:0045492 GO-bp
Annotation by Michelle Graham. GO Biological Process: xylan biosynthetic process
SoyBase N/A ISS
GO:0005739 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: mitochondrion
SoyBase N/A ISS
GO:0003674 GO-mf
Annotation by Michelle Graham. GO Molecular Function: molecular function
SoyBase N/A ISS
UniRef100_I1M8L1 UniRef
Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1M8L1_SOYBN
SoyBase E_val: 2.00E-152 ISS
Expression Patterns of Glyma14g08970
Gene expression representations made with eFP at the University of Toronto. Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE Paralogs of Glyma14g08970
Paralog Evidence Comments
Glyma17g36200 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.3.
Gene model name correspondences to Glyma14g08970 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.14g081800 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma14g08970
Coding sequences of Glyma14g08970
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma14g08970.1 sequence type=CDS gene model=Glyma14g08970 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGGGTGGCGTCTTCTACCATGAAGAAAAGCCACCAAACCATACCAAGAGATGCAAATTCATTGCAGGGACTTTGAAAGAAGTGTTTTCCCACTGTCAAACTTTTAGTTGTCTGAGGCTTTCAACTGCAAGCCTTGAGGAGGAGTGCCCCATCATTGATGATGTTGATGAGGTGATTGTTTCAGAGGTTAGAAGCCAAGTTATGGAGAAACAAAAGCACAAGCCAAGCCCATTGAGAGAAGGTTTTTCCTTGGCATACTCTCCTGCAACAAGGGAACTGTATGTCACTCACAGTCACACAATGGCACCACAAGCAAGGGTGGTAGTAGGTGATGAAGAACACGACGAAAGAGAAGAGTTTTTTTCGGTTAAAAGTTGTCTCTCGTGCTGTTCTTCGAGTGCTGTGAGTGACCAAGCATTTTATTCTGTGAAGACAAACCTGTCTAGATGTTCAAGCATGAATGAGGTTGAAGTCTCAGAATATTGGAGACGTTCAATAATTCAAGAGTTTTGCCACTGCGAGGGATGGCCTTTTGGGCTGAGCCGTAAAGCTGTGTTACTTCCACCACTGCCTAAGTCACCGTCTGAGTCATGGTTGTCGCGCAAAATACAACGAAGTACCAAAGTTACCTGA
Predicted protein sequences of Glyma14g08970
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma14g08970.1 sequence type=predicted peptide gene model=Glyma14g08970 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MGGVFYHEEKPPNHTKRCKFIAGTLKEVFSHCQTFSCLRLSTASLEEECPIIDDVDEVIVSEVRSQVMEKQKHKPSPLREGFSLAYSPATRELYVTHSHTMAPQARVVVGDEEHDEREEFFSVKSCLSCCSSSAVSDQAFYSVKTNLSRCSSMNEVEVSEYWRRSIIQEFCHCEGWPFGLSRKAVLLPPLPKSPSESWLSRKIQRSTKVT*
SoyBase
SoyBase transitions to NEW site on 10/1/2024
