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Report for Sequence Feature Glyma14g08734

Feature Type:gene_model
Chromosome:Gm14
Start:6753810
stop:6754774
Source:JGI
Version:Wm82.a1.v1.1
High confidence:yes



A newer version of this gene model can be found here:

Annotations for Glyma14g08734
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT3G13340AT Annotation by Michelle Graham. TAIR10: Transducin/WD40 repeat-like superfamily protein | chr3:4332370-4334603 FORWARD LENGTH=447 SoyBaseE_val: 2.00E-31ISS
GO:0000956GO-bp Annotation by Michelle Graham. GO Biological Process: nuclear-transcribed mRNA catabolic process SoyBaseN/AISS
GO:0008150GO-bp Annotation by Michelle Graham. GO Biological Process: biological process SoyBaseN/AISS
GO:0005737GO-cc Annotation by Michelle Graham. GO Cellular Compartment: cytoplasm SoyBaseN/AISS
GO:0005834GO-cc Annotation by Michelle Graham. GO Cellular Compartment: heterotrimeric G-protein complex SoyBaseN/AISS
GO:0080008GO-cc Annotation by Michelle Graham. GO Cellular Compartment: CUL4-RING ubiquitin ligase complex SoyBaseN/AISS
GO:0003674GO-mf Annotation by Michelle Graham. GO Molecular Function: molecular function SoyBaseN/AISS
PTHR22847Panther WD40 REPEAT PROTEIN JGI ISS
PTHR22847:SF188Panther WD-40 REPEAT FAMILY PROTEIN JGI ISS
PF00400PFAM WD domain, G-beta repeat JGI ISS
UniRef100_G7ISQ5UniRef Annotation by Michelle Graham. Most informative UniRef hit: WD repeat-containing protein n=1 Tax=Medicago truncatula RepID=G7ISQ5_MEDTR SoyBaseE_val: 1.00E-30ISS
UniRef100_I1M8I7UniRef Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1M8I7_SOYBN SoyBaseE_val: 3.00E-49ISS

Expression Patterns of Glyma14g08734
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma14g08734 not represented in the dataset
Glyma14g08734 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma14g08734 Gene Call Version Wm82.a1.v1.1
Corresponding NameAnnotation VersionEvidenceComments

References for Glyma14g08734
Schmutz et al. 2010
  Genome sequence of the palaeopolyploid soybean
  Nature 2010, 463:178-183

Coding sequences of Glyma14g08734
>Glyma14g08734.1   sequence type=CDS   gene model=Glyma14g08734   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGTTGTATGCATCTGCATGGCATCCTGATGGATACAAATTTGCCACTGGGAGCGTAGACAAAACATGTCGGATTTGGGATATTAGGAAGACATCAGAGTCTATGGACGTTCTTAAGGGCAACGCAGAAGCTATACGCTCGCTATGCTTCACAGCTGATGGACAATATATGGCTATGGGTGAGACAGTTGACTTTGTGCATATCTATGATGCGAGTAGATTTGAGAAGAAGCAGGTGGTGGATTTTTTTCGGACTGGTCTCTGGAGTATCTTTTAG
Predicted protein sequences of Glyma14g08734
>Glyma14g08734.1   sequence type=predicted peptide   gene model=Glyma14g08734   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MLYASAWHPDGYKFATGSVDKTCRIWDIRKTSESMDVLKGNAEAIRSLCFTADGQYMAMGETVDFVHIYDASRFEKKQVVDFFRTGLWSIF*






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