Glyma14g08710 - SoyBase

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Report for Sequence Feature Glyma14g08710

Feature Type:	gene_model
Chromosome:	Gm14
Start:	6730382
stop:	6734208
Source:	JGI
Version:	Wm82.a1.v1.1
High confidence:	yes

A newer version of this gene model can be found here:

Annotations for Glyma14g08710

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT4G33300	AT	Annotation by Michelle Graham. TAIR10: ADR1-like 1 \| chr4:16051162-16054005 REVERSE LENGTH=816	SoyBase	E_val: 0	ISS
GO:0006612	GO-bp	Annotation by Michelle Graham. GO Biological Process: protein targeting to membrane	SoyBase	N/A	ISS
GO:0006952	GO-bp	Annotation by Michelle Graham. GO Biological Process: defense response	SoyBase	N/A	ISS
GO:0009963	GO-bp	Annotation by Michelle Graham. GO Biological Process: positive regulation of flavonoid biosynthetic process	SoyBase	N/A	ISS
GO:0010363	GO-bp	Annotation by Michelle Graham. GO Biological Process: regulation of plant-type hypersensitive response	SoyBase	N/A	ISS
GO:0031348	GO-bp	Annotation by Michelle Graham. GO Biological Process: negative regulation of defense response	SoyBase	N/A	ISS
GO:0042742	GO-bp	Annotation by Michelle Graham. GO Biological Process: defense response to bacterium	SoyBase	N/A	ISS
GO:0048046	GO-cc	Annotation by Michelle Graham. GO Cellular Compartment: apoplast	SoyBase	N/A	ISS
GO:0043531	GO-mf	Annotation by Michelle Graham. GO Molecular Function: ADP binding	SoyBase	N/A	ISS
KOG4658	KOG	Apoptotic ATPase	JGI		ISS
PTHR23155	Panther	LEUCINE-RICH REPEAT-CONTAINING PROTEIN	JGI		ISS
PTHR23155:SF282	Panther	SUBFAMILY NOT NAMED	JGI		ISS
PF00560	PFAM	Leucine Rich Repeat	JGI		ISS
PF00931	PFAM	NB-ARC domain	JGI		ISS
PF05659	PFAM	Arabidopsis broad-spectrum mildew resistance protein RPW8	JGI		ISS
UniRef100_G7I4I5	UniRef	Annotation by Michelle Graham. Most informative UniRef hit: Nbs-lrr resistance protein n=1 Tax=Medicago truncatula RepID=G7I4I5_MEDTR	SoyBase	E_val: 0	ISS
UniRef100_I1M8I5	UniRef	Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1M8I5_SOYBN	SoyBase	E_val: 0	ISS

Expression Patterns of Glyma14g08710

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology


Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Paralogs of Glyma14g08710

Paralog	Evidence	Comments
Glyma17g36400	IGC	Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.3.

Gene model name correspondences to Glyma14g08710 Gene Call Version Wm82.a1.v1.1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma.14g079600	Wm82.a2.v1	IGC	As supplied by JGI

References for Glyma14g08710

Schmutz et al. 2010
Genome sequence of the palaeopolyploid soybean
Nature 2010, 463:178-183

Coding sequences of Glyma14g08710

Limit To All Plant Sequences

>Glyma14g08710.1   sequence type=CDS   gene model=Glyma14g08710   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGCCCTGAACGATTTTTTCGCGGGGGAGATCGCGACGGAGCTTCTGAAAATGCTGATCAGCATCTCCCGCAAGTCCCTCCTCTGCCGCGCCAGCGCCGACCAGCTCATCAGCTACATCCACGACCTCCTCCCCTCCATCGAGGAGATCAAGTACTCCGGCGTCGAGCTTCCTGCACTGCGCCAATCGCAACTCGACCGTCTCTCGGAGATTCTCCGCTCCGGCGTCGAGCTCTCCCACAAGGTCCTCTCCTCCAGCCGCTGGAACGTCTACCGCAACCTCCAGCTCGCCAAGAAAATGGACAAGCTCGAGAAGAACGTCTCCAAGTTCCTGTTGGGTCCCTTGCAGGCACACATGTTGGCCGACATACACCACACCCGGTTCGAGATGACCGAGCGGTTCGACCGGGTCGATAACTCGGTTCAAAGATTGGAGAAGTATTTTGGGAATATGAAGATAGGTGTTGGCGGCGGCGGGTGGGTGGAGGAGGCTGTGAGGAGCGTGGACGAGGATGTTGTTGATAGTAGCTCTGCTGTCGGGTTGGGTTTCGGGAAGAATAAGGTTAGGGAGATGGTTGTCGGGAGGGATGATCTTTGGGTTGTCGGGATTTCCGGGATTGGTGGTTCCGGGAAAACCACTCTTGCTAGAGAGCTCTGCAAAGATGACCAAGTTAGATGTTATTTCAGGGATAGGATTTTGTTCCTGACCGTGTCGCAGTCACCGAATGTGGAGCAGCTAAGGACGAATATTTGGGAGTATATTATGGGCAACGAGAGGTTGGATGCAAATTACATGGTTCCCCAATGGATGCCACAGTTTGAGTGCAGAAGCGAAGCTCGAACTCTGATTGTTTTGGATGATGTGTGGACACTCTCCGTGGTGGACCAGCTTGTGTGTAGAATACCAGGTTGCAAGTTTCTTGTGGTGTCAAGGCCTAAATTCCAAACGGTGTTGAGTTATGAAGTGGAATTGCTGAGTGAAGAGGATGCCCTGTCTTTGTTCTGTCACCATGCTTTTGGACAGAAATCAATTCCTTTAGCTGCTAATGAGAATTTGGTCAAGCAGGTTGTGACTGAGTGTGGAAGGCTTCCCTTGGCTCTTAAGGTGATTGGAGCTTCTTTGCGAGATCAAACTGAGATGTTTTGGTTGAGTGTTAAAAACAGGCTATCTCAGGGCCAAAGTATTGGGGAATCCCATGAAATCAATCTGATTGACAGAATGGCAATCAGTATCAATTACCTTCCAGAGAAGATCAAGGAGTGCTACTTGGACCTGTGTTGTTTTCCTGAGGATAAGAAAATCCCCCTTGATGTTCTCATCAATATATGGGTGGAAATCCATGATATTCCTGAAACAGAAGCTTATGCCATTGTGGTAGAGCTCTCCAACAAAAATCTCCTCACCTTAATGAAAGAGGCTCGTGCTGGAGGCATGTATAGCAGTTGCTTTGAGATCTCAGTTACTCAACATGATGTACTGAGAGACCTGGCCCTTAATTTCAGAAACCGTGAGAGCATTGATGAACGCCGGCTATTAGTTATGCCAAAACGGGAGAATGGAATGCCTAAAGAGTGGTTGAGATACAGGCACAAGCCATTTGAGGCTCAGATTGTTTCAATTCACACAGGTGAAATGAAGGAAGTGGACTGGTGTAATCTAGAATTTCCAAAGGCTGAAGTGCTGATCATTAATTTCACATCCACTGAATACTTCTTGCCCCCTTTCATCAATAGAATGCCAAATTTGAGGGCATTGATAATAATAAACTACAGTGCAACATATGCTTGCCTTCACAATGTTTCAGTTTTCAAGAACTTGTCCAACTTAAGGAGCCTCTGGCTTGAAAAAGTTTCCACCCCCGAGTTATCAAGCATTGTCTTGGAAAACTTGGGAAAATTATTTATTGTCCTGTGCAAGGTTAATGACAGTTTGGTGGAAAAAGAAGTAGACTTGGCTCAAGTCTTCCCTAATCTCTTTGAGCTCACTCTTGATCACTGTGATGATCTAACCCAATTGCCCTCAAGCATTTGTGGGATGAAGTCACTCCAGAACTTGAGTCTCACCAACTGCCACAATTTGACTGAATTACCAGTTGAACTAGGGAAACTAAGATCTCTAGAGATCCTACGTTTATATGCTTGTCCTTATCTGAAAACACTTCCTAATAGCATCTGTGACATGATGAGATTGAAGTATATTGACATTTCTCAATGTGTTAACTTGACATGCTTCCCTGAAAAGATTGGTAGATTGGTAAGCTTGGAGAAGATTGACATGAGGGAATGCTCCATGATTAGAAATGTGCCAAAGTCTGCAGTGTCATTGCAATCTCTGAGGCTTGTAATTTGTGATGAGGAGGTATCTGGGATTTGGAAAGAGGTTGCCAAGCCTGATAATGTGCATATTCAAGTATCAGAGCAATACTTTGATTTGGACTGGCTCAAAGAGTGA

Predicted protein sequences of Glyma14g08710

Limit To All Plant Sequences

>Glyma14g08710.1   sequence type=predicted peptide   gene model=Glyma14g08710   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MALNDFFAGEIATELLKMLISISRKSLLCRASADQLISYIHDLLPSIEEIKYSGVELPALRQSQLDRLSEILRSGVELSHKVLSSSRWNVYRNLQLAKKMDKLEKNVSKFLLGPLQAHMLADIHHTRFEMTERFDRVDNSVQRLEKYFGNMKIGVGGGGWVEEAVRSVDEDVVDSSSAVGLGFGKNKVREMVVGRDDLWVVGISGIGGSGKTTLARELCKDDQVRCYFRDRILFLTVSQSPNVEQLRTNIWEYIMGNERLDANYMVPQWMPQFECRSEARTLIVLDDVWTLSVVDQLVCRIPGCKFLVVSRPKFQTVLSYEVELLSEEDALSLFCHHAFGQKSIPLAANENLVKQVVTECGRLPLALKVIGASLRDQTEMFWLSVKNRLSQGQSIGESHEINLIDRMAISINYLPEKIKECYLDLCCFPEDKKIPLDVLINIWVEIHDIPETEAYAIVVELSNKNLLTLMKEARAGGMYSSCFEISVTQHDVLRDLALNFRNRESIDERRLLVMPKRENGMPKEWLRYRHKPFEAQIVSIHTGEMKEVDWCNLEFPKAEVLIINFTSTEYFLPPFINRMPNLRALIIINYSATYACLHNVSVFKNLSNLRSLWLEKVSTPELSSIVLENLGKLFIVLCKVNDSLVEKEVDLAQVFPNLFELTLDHCDDLTQLPSSICGMKSLQNLSLTNCHNLTELPVELGKLRSLEILRLYACPYLKTLPNSICDMMRLKYIDISQCVNLTCFPEKIGRLVSLEKIDMRECSMIRNVPKSAVSLQSLRLVICDEEVSGIWKEVAKPDNVHIQVSEQYFDLDWLKE*

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