Glyma14g08465 - SoyBase

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Report for Sequence Feature Glyma14g08465

Feature Type:	gene_model
Chromosome:	Gm14
Start:	6486151
stop:	6490948
Source:	JGI
Version:	Wm82.a1.v1.1
High confidence:	yes

A newer version of this gene model can be found here:

Annotations for Glyma14g08465

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT1G47510	AT	Annotation by Michelle Graham. TAIR10: inositol polyphosphate 5-phosphatase 11 \| chr1:17435991-17438296 REVERSE LENGTH=334	SoyBase	E_val: 6.00E-139	ISS
GO:0006499	GO-bp	Annotation by Michelle Graham. GO Biological Process: N-terminal protein myristoylation	SoyBase	N/A	ISS
GO:0009733	GO-bp	Annotation by Michelle Graham. GO Biological Process: response to auxin stimulus	SoyBase	N/A	ISS
GO:0009737	GO-bp	Annotation by Michelle Graham. GO Biological Process: response to abscisic acid stimulus	SoyBase	N/A	ISS
GO:0009753	GO-bp	Annotation by Michelle Graham. GO Biological Process: response to jasmonic acid stimulus	SoyBase	N/A	ISS
GO:0046854	GO-bp	Annotation by Michelle Graham. GO Biological Process: phosphatidylinositol phosphorylation	SoyBase	N/A	ISS
GO:0046856	GO-bp	Annotation by Michelle Graham. GO Biological Process: phosphatidylinositol dephosphorylation	SoyBase	N/A	ISS
GO:0005737	GO-cc	Annotation by Michelle Graham. GO Cellular Compartment: cytoplasm	SoyBase	N/A	ISS
GO:0004439	GO-mf	Annotation by Michelle Graham. GO Molecular Function: phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity	SoyBase	N/A	ISS
GO:0016787	GO-mf	Annotation by Michelle Graham. GO Molecular Function: hydrolase activity	SoyBase	N/A	ISS
GO:0034485	GO-mf	Annotation by Michelle Graham. GO Molecular Function: phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity	SoyBase	N/A	ISS
GO:0043813	GO-mf	Annotation by Michelle Graham. GO Molecular Function: phosphatidylinositol-3,5-bisphosphate 5-phosphatase activity	SoyBase	N/A	ISS
KOG0565	KOG	Inositol polyphosphate 5-phosphatase and related proteins	JGI		ISS
PTHR11200	Panther	INOSITOL 5-PHOSPHATASE	JGI		ISS
PTHR11200:SF17	Panther	SH2-CONTAINING INOSITOL 5-PHOSPHATASE 2	JGI		ISS
PF03372	PFAM	Endonuclease/Exonuclease/phosphatase family	JGI		ISS
UniRef100_G7I5A8	UniRef	Annotation by Michelle Graham. Best UniRef hit: Type I inositol-1,4,5-trisphosphate 5-phosphatase n=1 Tax=Medicago truncatula RepID=G7I5A8_MEDTR	SoyBase	E_val: 0	ISS
UniRef100_G7I5A8	UniRef	Annotation by Michelle Graham. Most informative UniRef hit: Type I inositol-1,4,5-trisphosphate 5-phosphatase n=1 Tax=Medicago truncatula RepID=G7I5A8_MEDTR	SoyBase	E_val: 0	ISS

Expression Patterns of Glyma14g08465

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma14g08465 not represented in the dataset	Glyma14g08465 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Paralogs of Glyma14g08465

Paralog	Evidence	Comments
Glyma17g36611	IGC	Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.3.

Gene model name correspondences to Glyma14g08465 Gene Call Version Wm82.a1.v1.1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma.14g077900	Wm82.a2.v1	IGC	As supplied by JGI

References for Glyma14g08465

Schmutz et al. 2010
Genome sequence of the palaeopolyploid soybean
Nature 2010, 463:178-183

Transcripts of Glyma14g08465

Limit To All Plant Sequences

>Glyma14g08465.2   sequence type=transcript   gene model=Glyma14g08465   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
GTGGCTTCCAATATATATATATATATGGTTCAAATAATAACCAGGTCAATAATTTTAAAATCCTTCCATCTCCCTCTATCTCTTAAAAGTGACTTTTCACTCAAAATTGCTTGTATATATCTGGAAATCCCTGTTTTTCATTTTGCCAATCACGTCACACACAATATGGGAAACCAACTTTGCAAAGGTAAAACAAGGTCGAAGAGAAGGCCAATGGGTTTCATTCATAACCAAGCTTCACCCTCTCACATAGGGATAAGAACTGTGGGCGTGGAAAAAGCTTGCAGTTTCTCCATTGATTCAGATCTTTGCATCTCCATAGTTACTTGGAACATGAATGGCCAGGTTACGTTTGAAGATTTTGCTGAAATGGTTGGCAGTAACCGCGAGTTCGATCTTCTAGCTGTTGGCTTGCAAGAGGCTCCTCCATGTCCACGAAACAAAGTCGCAACTCTGCTTTCAGCAGCTCTTGATGAAAGTCATACCCTGATAGGTAAAGTTATCATGCAATCTTTGCAGTTATACCTGTTTGGGCTAAAGGATGCTGGATCGTTCATTAACGAATTGAAGGTAGACAAACAATCTGTTGGGGGCTGTGGAGGAATAATTGGAAGAAAGAAAGGGGCTGTAGCCATCCGTATCAACTACAAAGGCATTCGAATGGTGTTCATCTCGTGCCACCTCTCTGCTCATGCTCGCAACGTGGAAGAAAGAAATTCACAATGCAGGCATATATCACACTCCCTCTTTTCAAAGTTCTGGAACCCATATTCTAGACCATCCCATATTACAATTTGGTTAGGAGATCTAAACTACAGGCTTCAAGGGATTGATACATATCCTGCTAGAAGTTTGATAGAGCAAAACCTTCACCGGCGGTTGCATGGCAAAGATCAACTCTTACAGGAAGCTGGTCGAGGACAAATTTTCAACGGTTTTTGTGAGGGAACATTGAATTTCAAGCCAACTTATAAGTACAATAAAGGAAGTAGCAATTATGATACAAGTCATAAGATACGAGTGCCTGCATGGACAGACCGTATATTGTTCAGAATTGAAGACGAAAACAAAATGGAAGCAACCCTACATTCGTACGAGTCGATGGATGAAATCTACGGTTCTGATCATAAACCAGTTAAGGCACACCTCTGCTTAAGACTTCGTCAAATTCCAACTAATTAAACCAAGTTGTAGTGAACAAATCTAGCTAGCTATGTGCGGAAATTAACATCTGATATATAAAAGTATAACATTATTTTTTTTTATCTACAAGAAATTAATGTATTAGTGACAAAGTTTGTTTTTCCTTCACTGATATTAACCCTACAAAAATTTTATTGACGAGTGTAAAGTGTTTCGTGATTAATGTTATTATTTATTTTTTAACCTTAAGGAATTTGTGTAGTGAAATAAGATAGAATCTCGCATATAATGCGTTGTAAGTTTGAACTTCTACTCATATCTTTAGAGTGACTTAAATGTAAG

Coding sequences of Glyma14g08465

Limit To All Plant Sequences

>Glyma14g08465.1   sequence type=CDS   gene model=Glyma14g08465   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGTTCAAATAATAACCAGGTCAATAATTTTAAAATCCTTCCATCTCCCTCTATCTCTTAAAAGTGACTTTTCACTCAAAATTGCTTGTATATATCTGGAAATCCCTGTTTTTCATTTTGCCAATCACGTCACACACAATATGGGAAACCAACTTTGCAAAGGAAGTAAAACAAGGTCGAAGAGAAGGCCAATGGGTTTCATTCATAACCAAGCTTCACCCTCTCACATAGGGATAAGAACTGTGGGCGTGGAAAAAGCTTGCAGTTTCTCCATTGATTCAGATCTTTGCATCTCCATAGTTACTTGGAACATGAATGGCCAGGTTACGTTTGAAGATTTTGCTGAAATGGTTGGCAGTAACCGCGAGTTCGATCTTCTAGCTGTTGGCTTGCAAGAGGCTCCTCCATGTCCACGAAACAAAGTCGCAACTCTGCTTTCAGCAGCTCTTGATGAAAGTCATACCCTGATAGGTAAAGTTATCATGCAATCTTTGCAGTTATACCTGTTTGGGCTAAAGGATGCTGGATCGTTCATTAACGAATTGAAGGTAGACAAACAATCTGTTGGGGGCTGTGGAGGAATAATTGGAAGAAAGAAAGGGGCTGTAGCCATCCGTATCAACTACAAAGGCATTCGAATGGTGTTCATCTCGTGCCACCTCTCTGCTCATGCTCGCAACGTGGAAGAAAGAAATTCACAATGCAGGCATATATCACACTCCCTCTTTTCAAAGTTCTGGAACCCATATTCTAGACCATCCCATATTACAATTTGGTTAGGAGATCTAAACTACAGGCTTCAAGGGATTGATACATATCCTGCTAGAAGTTTGATAGAGCAAAACCTTCACCGGCGGTTGCATGGCAAAGATCAACTCTTACAGGAAGCTGGTCGAGGACAAATTTTCAACGGTTTTTGTGAGGGAACATTGAATTTCAAGCCAACTTATAAGTACAATAAAGGAAGTAGCAATTATGATACAAGTCATAAGATACGAGTGCCTGCATGGACAGACCGTATATTGTTCAGAATTGAAGACGAAAACAAAATGGAAGCAACCCTACATTCGTACGAGTCGATGGATGAAATCTACGGTTCTGATCATAAACCAGTTAAGGCACACCTCTGCTTAAGACTTCGTCAAATTCCAACTAATTAA

>Glyma14g08465.2   sequence type=CDS   gene model=Glyma14g08465   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGTTCAAATAATAACCAGGTCAATAATTTTAAAATCCTTCCATCTCCCTCTATCTCTTAAAAGTGACTTTTCACTCAAAATTGCTTGTATATATCTGGAAATCCCTGTTTTTCATTTTGCCAATCACGTCACACACAATATGGGAAACCAACTTTGCAAAGGTAAAACAAGGTCGAAGAGAAGGCCAATGGGTTTCATTCATAACCAAGCTTCACCCTCTCACATAGGGATAAGAACTGTGGGCGTGGAAAAAGCTTGCAGTTTCTCCATTGATTCAGATCTTTGCATCTCCATAGTTACTTGGAACATGAATGGCCAGGTTACGTTTGAAGATTTTGCTGAAATGGTTGGCAGTAACCGCGAGTTCGATCTTCTAGCTGTTGGCTTGCAAGAGGCTCCTCCATGTCCACGAAACAAAGTCGCAACTCTGCTTTCAGCAGCTCTTGATGAAAGTCATACCCTGATAGGTAAAGTTATCATGCAATCTTTGCAGTTATACCTGTTTGGGCTAAAGGATGCTGGATCGTTCATTAACGAATTGAAGGTAGACAAACAATCTGTTGGGGGCTGTGGAGGAATAATTGGAAGAAAGAAAGGGGCTGTAGCCATCCGTATCAACTACAAAGGCATTCGAATGGTGTTCATCTCGTGCCACCTCTCTGCTCATGCTCGCAACGTGGAAGAAAGAAATTCACAATGCAGGCATATATCACACTCCCTCTTTTCAAAGTTCTGGAACCCATATTCTAGACCATCCCATATTACAATTTGGTTAGGAGATCTAAACTACAGGCTTCAAGGGATTGATACATATCCTGCTAGAAGTTTGATAGAGCAAAACCTTCACCGGCGGTTGCATGGCAAAGATCAACTCTTACAGGAAGCTGGTCGAGGACAAATTTTCAACGGTTTTTGTGAGGGAACATTGAATTTCAAGCCAACTTATAAGTACAATAAAGGAAGTAGCAATTATGATACAAGTCATAAGATACGAGTGCCTGCATGGACAGACCGTATATTGTTCAGAATTGAAGACGAAAACAAAATGGAAGCAACCCTACATTCGTACGAGTCGATGGATGAAATCTACGGTTCTGATCATAAACCAGTTAAGGCACACCTCTGCTTAAGACTTCGTCAAATTCCAACTAATTAA

Predicted protein sequences of Glyma14g08465

Limit To All Plant Sequences

>Glyma14g08465.1   sequence type=predicted peptide   gene model=Glyma14g08465   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MVQIITRSIILKSFHLPLSLKSDFSLKIACIYLEIPVFHFANHVTHNMGNQLCKGSKTRSKRRPMGFIHNQASPSHIGIRTVGVEKACSFSIDSDLCISIVTWNMNGQVTFEDFAEMVGSNREFDLLAVGLQEAPPCPRNKVATLLSAALDESHTLIGKVIMQSLQLYLFGLKDAGSFINELKVDKQSVGGCGGIIGRKKGAVAIRINYKGIRMVFISCHLSAHARNVEERNSQCRHISHSLFSKFWNPYSRPSHITIWLGDLNYRLQGIDTYPARSLIEQNLHRRLHGKDQLLQEAGRGQIFNGFCEGTLNFKPTYKYNKGSSNYDTSHKIRVPAWTDRILFRIEDENKMEATLHSYESMDEIYGSDHKPVKAHLCLRLRQIPTN*

>Glyma14g08465.2   sequence type=predicted peptide   gene model=Glyma14g08465   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MVQIITRSIILKSFHLPLSLKSDFSLKIACIYLEIPVFHFANHVTHNMGNQLCKGKTRSKRRPMGFIHNQASPSHIGIRTVGVEKACSFSIDSDLCISIVTWNMNGQVTFEDFAEMVGSNREFDLLAVGLQEAPPCPRNKVATLLSAALDESHTLIGKVIMQSLQLYLFGLKDAGSFINELKVDKQSVGGCGGIIGRKKGAVAIRINYKGIRMVFISCHLSAHARNVEERNSQCRHISHSLFSKFWNPYSRPSHITIWLGDLNYRLQGIDTYPARSLIEQNLHRRLHGKDQLLQEAGRGQIFNGFCEGTLNFKPTYKYNKGSSNYDTSHKIRVPAWTDRILFRIEDENKMEATLHSYESMDEIYGSDHKPVKAHLCLRLRQIPTN*

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