Glyma14g08180 - SoyBase

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Report for Sequence Feature Glyma14g08180

Feature Type:	gene_model
Chromosome:	Gm14
Start:	6189251
stop:	6192458
Source:	JGI
Version:	Wm82.a1.v1.1
High confidence:	yes

A newer version of this gene model can be found here:

Annotations for Glyma14g08180

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT1G75170	AT	Annotation by Michelle Graham. TAIR10: Sec14p-like phosphatidylinositol transfer family protein \| chr1:28214405-28215686 FORWARD LENGTH=296	SoyBase	E_val: 3.00E-147	ISS
GO:0006810	GO-bp	Annotation by Michelle Graham. GO Biological Process: transport	SoyBase	N/A	ISS
GO:0005886	GO-cc	Annotation by Michelle Graham. GO Cellular Compartment: plasma membrane	SoyBase	N/A	ISS
GO:0005215	GO-mf	Annotation by Michelle Graham. GO Molecular Function: transporter activity	SoyBase	N/A	ISS
KOG1470	KOG	Phosphatidylinositol transfer protein PDR16 and related proteins	JGI		ISS
PTHR10174	Panther	RETINALDEHYDE BINDING PROTEIN-RELATED	JGI		ISS
PTHR10174:SF78	Panther	SEC14 CYTOSOLIC FACTOR FAMILY PROTEIN / PHOSPHOGLY	JGI		ISS
PF00650	PFAM	CRAL/TRIO domain	JGI		ISS
PF03765	PFAM	CRAL/TRIO, N-terminus	JGI		ISS
UniRef100_B9R7T6	UniRef	Annotation by Michelle Graham. Most informative UniRef hit: Transporter, putative n=1 Tax=Ricinus communis RepID=B9R7T6_RICCO	SoyBase	E_val: 3.00E-158	ISS
UniRef100_I1M8D3	UniRef	Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=3 Tax=Glycine max RepID=I1M8D3_SOYBN	SoyBase	E_val: 0	ISS

Expression Patterns of Glyma14g08180

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma14g08180 not represented in the dataset	Glyma14g08180 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Paralogs of Glyma14g08180

Paralog	Evidence	Comments
Glyma17g36850	IGC	Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.3.

Gene model name correspondences to Glyma14g08180 Gene Call Version Wm82.a1.v1.1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma.14g075300	Wm82.a2.v1	IGC	As supplied by JGI

References for Glyma14g08180

Schmutz et al. 2010
Genome sequence of the palaeopolyploid soybean
Nature 2010, 463:178-183

Transcripts of Glyma14g08180

Limit To All Plant Sequences

>Glyma14g08180.2   sequence type=transcript   gene model=Glyma14g08180   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
GGGTCAGTCTTCTGAAGATCTTTTGGGGGGTTGTGAATTTGTGTCTTCCTGGCTCCCAACCCACACGCAACGCAACCATAGAATGGAATGAATGAAGGCAAAGCTTATACTTATAAAAGAGAGATAGAAATTGGTTGTGAAAAACAGAAGCACTTTGTTTCTAAGTAAAAGGAATCTTCAGCTGCCATGTTTCATCGCTGGAGCAATTCTCATCAACAGGATCAGGGAAGCAGCGAGCTTTATGCTGAATCCAAGATTAAAGAGCTGAAGGGTGTTATCGGACCCTTATCTGGACGCAGTTTGACGTATTGCACTGATGCATGTTTTAAGAGATATTTGGAAGCTCGAAACTGGAACGTAGACAAGTCCAAGAAGATGTTGGAGGAGACACTCAGGTGGAGATCAACCTATAAGCCAGAGGAAATTCGCTGGGTAAGTTGTGGCTTAGGTACTCGTTTTAGATACTTTGGTGCATAGATATGGTCTGAAATACTATAATAAGGTTAATATGTCATTTTTCAGCATGAGGTTGCAATGGAAGGAGAGACTGGGAAATTGTATAGAGCAAGTTTTCATGATAGACAAGGAAGGACTGTTCTTATTTTGAGACCTGGAATGCAGAACACTACTTCAATGGAGAATCAGTTGCGGCATCTTGTGTATCTTTTGGAAAATGCCATGCTTAATCTTCCACCGGGTCAAGAACAAATGTCATGGTTGATAGACTTCACTGGGTGGTCAATAACCAACAATGTGCCCCTTAAATTAGCCAGAGAGACCATCAACATTTTGCAGAATCACTACCCTGAGAGGCTTGCCATAGCATTTCTTTACAACCCCCCTCGAGTTTTTGAAGCTTTTTGGAAGATAGTCAAGTACTTCTTGGACAACAAGACATTTCAGAAGGTGAAGTTTGTCTACCCGAATAATAAAGATAGTGTGCAGGTCATGAAGTCCTATTTTGATGAGGAAAATCTGCCCAAAGAACTAGGTGGAAAAAGCATAATGAGTTATAACCATGAGGAGTTCTCCAGATTAATGGTTCAGGATGATTTGAAGTGTGCAGCATTTTGGGGATCTGATGGGAAGCTCTCAAACCACATTGTCAACGGGAATTCTGCATCAGTTCTAAAATGAAGCTCTCATAATGTTTGGATTACCGTTTGCAGGTGGTGAATCTATATTGAAAGTACGTAGGGAGAAGCATGCTTTTGTTACTTTTGAGTTAATAACTTTGGAAGGATTGGAACGGTAATCCAAACATACACTTGGTTTTAGTGGAGATGGTATGGATACTAATCATTGTAAAGCCATTAGCTCCTGGCAAATTAGAACTAGGGGTGCATCCCCAGTTTAATTAATTACTGCAAAGAGGGATTTATAATACAGTTATCATTTATATACTGCATCACTATTCCATCCTGATATGGTGAAACTTGTTCCTAAGCTAGCAGATATATATATATCAAGCTGAGGAACTATTGAAAACTTGACAATGACAATGTTGCTGTTTAAAAAATAAACTACCTCTTCAACTTTAAAAATTAAAAGCCATTTCTGGTAGCAACATTTTTTGACCATTTACATGAACACGCTTTTATTTGCTACTTACAACCTACACAATCAATCACACAATGGATGTCAACCCATGATGATGACAAAATTTGACACTTATGCCATCCTTTGAAACAAGAACATTCTTTAAAGGCTTATGAGGGGGGGGGGGGGGATACCACTGATGAGCATATAAGTTCAAACTCTTAAGGGTTATATGAACCTCCTCTTAAAATTACGAATAGTTGCTTGGTATGAGCGTCCTAACAAGCTAACCCCTATACCAACTCCTACAAAGATGCCAAGCCCAATTCCAACACCAACTCTAACCCCAGCATTAAACCATGATAGTTCACCATCTTCCCCATCTACATATACTGTTCTTGGCCAATACATGCTGTTGTAATCCTCTTCTTGTTCCAGTTTGAAGCTTCTACAGTCAACTACCTACAAAGCAAAAGAAGGGAAGGTTATAGACAAAAACACATACTAATAATCTTAAATACATCGAAATTTCACTGCCATAATTTATTATCACTAGCTATGAAATTGAGATGCAATACCAGGGCAAATTAGGGGGAAAATAATTCTCATGGCACAATCAAATTAGCAAACATATATCAAAAGATCTGTTCAAATGAAATTATTACTACATCCAAAGAAAATCAAGGCATAGAGCAATGCATGTATACTTCCCCAAGTAAATGTTGCAAAGAAGATGAAACCGTTAATGAAAAATCTAGCTCTGAATGCCGATACTCAGAATTAATATGTTTGTGTCATAAAAGAAAGGGAAGACCAAATGTTTCAGTGTAATTTGACAATCTTTTTTTTCAATCCAATTTAG

>Glyma14g08180.3   sequence type=transcript   gene model=Glyma14g08180   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
AATTTGTGTCTTCCTGGCTCCCAACCCACACGCAACGCAACCATAGAATGGAATGAATGAAGAGAGATAGAAATTGGTTGTGAAAAACAGAAGCACTTTGTTTCTAAGTAAAAGGAATCTTCAGCTGCCATGTTTCATCGCTGGAGCAATTCTCATCAACAGGATCAGGGAAGCAGCGAGCTTTATGCTGAATCCAAGATTAAAGAGCTGAAGGGTGTTATCGGACCCTTATCTGGACGCAGTTTGACGTATTGCACTGATGCATGTTTTAAGAGATATTTGGAAGCTCGAAACTGGAACGTAGACAAGTCCAAGAAGATGTTGGAGGAGACACTCAGGTGGAGATCAACCTATAAGCCAGAGGAAATTCGCTGGCATGAGGTTGCAATGGAAGGAGAGACTGGGAAATTGTATAGAGCAAGTTTTCATGATAGACAAGGAAGGACTGTTCTTATTTTGAGACCTGGAATGCAGAACACTACTTCAATGGAGAATCAGTTGCGGCATCTTGTGTATCTTTTGGAAAATGCCATGCTTAATCTTCCACCGGGTCAAGAACAAATGTCATGGTTGATAGACTTCACTGGGTGGTCAATAACCAACAATGTGCCCCTTAAATTAGCCAGAGAGACCATCAACATTTTGCAGAATCACTACCCTGAGAGGCTTGCCATAGCATTTCTTTACAACCCCCCTCGAGTTTTTGAAGCTTTTTGGAAGATAGTCAAGTACTTCTTGGACAACAAGACATTTCAGAAGGTGAAGTTTGTCTACCCGAATAATAAAGATAGTGTGCAGGTCATGAAGTCCTATTTTGATGAGGAAAATCTGCCCAAAGAACTAGGTGGAAAAAGCATAATGAGTTATAACCATGAGGAGTTCTCCAGATTAATGGTTCAGGATGATTTGAAGTGTGCAGCATTTTGGGGATCTGATGGGAAGCTCTCAAACCACATTGTCAACGGGAATTCTGCATCAGTTCTAAAATGAAGCTCTCATAATGTTTGGATTACCGTTTGCAGGTGGTGAATCTATATTGAAAGTACGTAGGGAGAAGCATGCTTTTGTTACTTTTGAGTTAATAACTTTGGAAGGATTGGAACGGTAATCCAAACATACACTTGGTTTTAGTGGAGATGGTATGGATACTAATCATTGTAAAGCCATTAGCTCCTGGCAAATTAGAACTAGGGGTGCATCCCCAGTTTAATTAATTACTGCAAAGAGGGATTTATAATACAGTTATCATTTATATACTGCATCACTATTCCATCCTGATATGGTGAAACTTGTTCCTAAGCTAGCAGATATATATATATCAAGCTGAGGAACTATTGAAAACTTGACAATGACAATGTTGCTGTTTAAAAAATAAACTACCTCTTCAACTTTAAAAATTAAAAGCCATTTCTGGTAGCAACATTTTTTGACCATTTACATGAACACGCTTTTATTTGCTACTTACAACCTACACAATCAATCACACAATGGATGTCAACCCATGATGATGACAAAATTTGACACTTATGCCATCCTTTGAAACAAGAACATTCTTTAAAGGCTTATGAGGGGGGGGGGGGGGATACCACTGATGAGCATATAAGTTCAAACTCTTAAGGGTTATATGAACCTCCTCTTAAAATTACGAATAGTTGCTTGGTATGAGCGTCCTAACAAGCTAACCCCTATACCAACTCCTACAAAGATGCCAAGCCCAATTCCAACACCAACTCTAACCCCAGCATTAAACCATGATAGTTCACCATCTTCCCCATCTACATATACTGTTCTTGGCCAATACATGCTGTTGTAATCCTCTTCTTGTTCCAGTTTGAAGCTTCTACAGTCAACTACCTACAAAGCAAAAGAAGGGAAGGTTATAGACAAAAACACATACTAATAATCTTAAATACATCGAAATTTCACTGCCATAATTTATTATCACTAGCTATGAAATTGAGATGCAATACCAGGGCAAATTAGGGGGAAAATAATTCTCATGGCACAATCAAATTAGCAAACATATATCAAAAGATCTGTTCAAATGAAATTATTACTACATCCAAAGAAAATCAAGGCATAGAGCAATGCATGTATACTTCCCCAAGTAAATGTTGCAAAGAAGATGAAACCGTTAATGAAAAATCTAGCTCTGAATGCCGATACTCAGAATTAATATGTTTGTGTCATAAAAGAAAGGGAAGACCAAATGTTTCAGTGTAATTTGACAATCTTTTTTTTCAATCCAATTTAG

Coding sequences of Glyma14g08180

Limit To All Plant Sequences

>Glyma14g08180.1   sequence type=CDS   gene model=Glyma14g08180   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGTTTCATCGCTGGAGCAATTCTCATCAACAGGATCAGGGAAGCAGCGAGCTTTATGCTGAATCCAAGATTAAAGAGCTGAAGGGTGTTATCGGACCCTTATCTGGACGCAGTTTGACGTATTGCACTGATGCATGTTTTAAGAGATATTTGGAAGCTCGAAACTGGAACGTAGACAAGTCCAAGAAGATGTTGGAGGAGACACTCAGGTGGAGATCAACCTATAAGCCAGAGGAAATTCGCTGGCATGAGGTTGCAATGGAAGGAGAGACTGGGAAATTGTATAGAGCAAGTTTTCATGATAGACAAGGAAGGACTGTTCTTATTTTGAGACCTGGAATGCAGAACACTACTTCAATGGAGAATCAGTTGCGGCATCTTGTGTATCTTTTGGAAAATGCCATGCTTAATCTTCCACCGGGTCAAGAACAAATGTCATGGTTGATAGACTTCACTGGGTGGTCAATAACCAACAATGTGCCCCTTAAATTAGCCAGAGAGACCATCAACATTTTGCAGAATCACTACCCTGAGAGGCTTGCCATAGCATTTCTTTACAACCCCCCTCGAGTTTTTGAAGCTTTTTGGAAGATAGTCAAGTACTTCTTGGACAACAAGACATTTCAGAAGGTGAAGTTTGTCTACCCGAATAATAAAGATAGTGTGCAGGTCATGAAGTCCTATTTTGATGAGGAAAATCTGCCCAAAGAACTAGGTGGAAAAAGCATAATGAGTTATAACCATGAGGAGTTCTCCAGATTAATGGTTCAGGATGATTTGAAGTGTGCAGCATTTTGGGGATCTGATGGGAAGCTCTCAAACCACATTGTCAACGGGAATTCTGCATCAGTTCTAAAATGA

>Glyma14g08180.2   sequence type=CDS   gene model=Glyma14g08180   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGAAGGAGAGACTGGGAAATTGTATAGAGCAAGTTTTCATGATAGACAAGGAAGGACTGTTCTTATTTTGAGACCTGGAATGCAGAACACTACTTCAATGGAGAATCAGTTGCGGCATCTTGTGTATCTTTTGGAAAATGCCATGCTTAATCTTCCACCGGGTCAAGAACAAATGTCATGGTTGATAGACTTCACTGGGTGGTCAATAACCAACAATGTGCCCCTTAAATTAGCCAGAGAGACCATCAACATTTTGCAGAATCACTACCCTGAGAGGCTTGCCATAGCATTTCTTTACAACCCCCCTCGAGTTTTTGAAGCTTTTTGGAAGATAGTCAAGTACTTCTTGGACAACAAGACATTTCAGAAGGTGAAGTTTGTCTACCCGAATAATAAAGATAGTGTGCAGGTCATGAAGTCCTATTTTGATGAGGAAAATCTGCCCAAAGAACTAGGTGGAAAAAGCATAATGAGTTATAACCATGAGGAGTTCTCCAGATTAATGGTTCAGGATGATTTGAAGTGTGCAGCATTTTGGGGATCTGATGGGAAGCTCTCAAACCACATTGTCAACGGGAATTCTGCATCAGTTCTAAAATGA

>Glyma14g08180.3   sequence type=CDS   gene model=Glyma14g08180   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGTTTCATCGCTGGAGCAATTCTCATCAACAGGATCAGGGAAGCAGCGAGCTTTATGCTGAATCCAAGATTAAAGAGCTGAAGGGTGTTATCGGACCCTTATCTGGACGCAGTTTGACGTATTGCACTGATGCATGTTTTAAGAGATATTTGGAAGCTCGAAACTGGAACGTAGACAAGTCCAAGAAGATGTTGGAGGAGACACTCAGGTGGAGATCAACCTATAAGCCAGAGGAAATTCGCTGGCATGAGGTTGCAATGGAAGGAGAGACTGGGAAATTGTATAGAGCAAGTTTTCATGATAGACAAGGAAGGACTGTTCTTATTTTGAGACCTGGAATGCAGAACACTACTTCAATGGAGAATCAGTTGCGGCATCTTGTGTATCTTTTGGAAAATGCCATGCTTAATCTTCCACCGGGTCAAGAACAAATGTCATGGTTGATAGACTTCACTGGGTGGTCAATAACCAACAATGTGCCCCTTAAATTAGCCAGAGAGACCATCAACATTTTGCAGAATCACTACCCTGAGAGGCTTGCCATAGCATTTCTTTACAACCCCCCTCGAGTTTTTGAAGCTTTTTGGAAGATAGTCAAGTACTTCTTGGACAACAAGACATTTCAGAAGGTGAAGTTTGTCTACCCGAATAATAAAGATAGTGTGCAGGTCATGAAGTCCTATTTTGATGAGGAAAATCTGCCCAAAGAACTAGGTGGAAAAAGCATAATGAGTTATAACCATGAGGAGTTCTCCAGATTAATGGTTCAGGATGATTTGAAGTGTGCAGCATTTTGGGGATCTGATGGGAAGCTCTCAAACCACATTGTCAACGGGAATTCTGCATCAGTTCTAAAATGA

Predicted protein sequences of Glyma14g08180

Limit To All Plant Sequences

>Glyma14g08180.1   sequence type=predicted peptide   gene model=Glyma14g08180   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MFHRWSNSHQQDQGSSELYAESKIKELKGVIGPLSGRSLTYCTDACFKRYLEARNWNVDKSKKMLEETLRWRSTYKPEEIRWHEVAMEGETGKLYRASFHDRQGRTVLILRPGMQNTTSMENQLRHLVYLLENAMLNLPPGQEQMSWLIDFTGWSITNNVPLKLARETINILQNHYPERLAIAFLYNPPRVFEAFWKIVKYFLDNKTFQKVKFVYPNNKDSVQVMKSYFDEENLPKELGGKSIMSYNHEEFSRLMVQDDLKCAAFWGSDGKLSNHIVNGNSASVLK*

>Glyma14g08180.2   sequence type=predicted peptide   gene model=Glyma14g08180   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MEGETGKLYRASFHDRQGRTVLILRPGMQNTTSMENQLRHLVYLLENAMLNLPPGQEQMSWLIDFTGWSITNNVPLKLARETINILQNHYPERLAIAFLYNPPRVFEAFWKIVKYFLDNKTFQKVKFVYPNNKDSVQVMKSYFDEENLPKELGGKSIMSYNHEEFSRLMVQDDLKCAAFWGSDGKLSNHIVNGNSASVLK*

>Glyma14g08180.3   sequence type=predicted peptide   gene model=Glyma14g08180   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MFHRWSNSHQQDQGSSELYAESKIKELKGVIGPLSGRSLTYCTDACFKRYLEARNWNVDKSKKMLEETLRWRSTYKPEEIRWHEVAMEGETGKLYRASFHDRQGRTVLILRPGMQNTTSMENQLRHLVYLLENAMLNLPPGQEQMSWLIDFTGWSITNNVPLKLARETINILQNHYPERLAIAFLYNPPRVFEAFWKIVKYFLDNKTFQKVKFVYPNNKDSVQVMKSYFDEENLPKELGGKSIMSYNHEEFSRLMVQDDLKCAAFWGSDGKLSNHIVNGNSASVLK*

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