Glyma14g07210 - SoyBase

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Report for Sequence Feature Glyma14g07210

Feature Type:	gene_model
Chromosome:	Gm14
Start:	5358438
stop:	5360897
Source:	JGI
Version:	Wm82.a1.v1.1
High confidence:	yes

A newer version of this gene model can be found here:

Annotations for Glyma14g07210

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT3G11410	AT	Annotation by Michelle Graham. TAIR10: protein phosphatase 2CA \| chr3:3584181-3585649 REVERSE LENGTH=399	SoyBase	E_val: 6.00E-140	ISS
GO:0006470	GO-bp	Annotation by Michelle Graham. GO Biological Process: protein dephosphorylation	SoyBase	N/A	ISS
GO:0009409	GO-bp	Annotation by Michelle Graham. GO Biological Process: response to cold	SoyBase	N/A	ISS
GO:0009414	GO-bp	Annotation by Michelle Graham. GO Biological Process: response to water deprivation	SoyBase	N/A	ISS
GO:0009737	GO-bp	Annotation by Michelle Graham. GO Biological Process: response to abscisic acid stimulus	SoyBase	N/A	ISS
GO:0009738	GO-bp	Annotation by Michelle Graham. GO Biological Process: abscisic acid mediated signaling pathway	SoyBase	N/A	ISS
GO:0009788	GO-bp	Annotation by Michelle Graham. GO Biological Process: negative regulation of abscisic acid mediated signaling pathway	SoyBase	N/A	ISS
GO:0010119	GO-bp	Annotation by Michelle Graham. GO Biological Process: regulation of stomatal movement	SoyBase	N/A	ISS
GO:0042538	GO-bp	Annotation by Michelle Graham. GO Biological Process: hyperosmotic salinity response	SoyBase	N/A	ISS
GO:0005634	GO-cc	Annotation by Michelle Graham. GO Cellular Compartment: nucleus	SoyBase	N/A	ISS
GO:0005737	GO-cc	Annotation by Michelle Graham. GO Cellular Compartment: cytoplasm	SoyBase	N/A	ISS
GO:0005829	GO-cc	Annotation by Michelle Graham. GO Cellular Compartment: cytosol	SoyBase	N/A	ISS
GO:0003824	GO-mf	Annotation by Michelle Graham. GO Molecular Function: catalytic activity	SoyBase	N/A	ISS
GO:0004721	GO-mf	Annotation by Michelle Graham. GO Molecular Function: phosphoprotein phosphatase activity	SoyBase	N/A	ISS
GO:0004722	GO-mf	Annotation by Michelle Graham. GO Molecular Function: protein serine/threonine phosphatase activity	SoyBase	N/A	ISS
GO:0005515	GO-mf	Annotation by Michelle Graham. GO Molecular Function: protein binding	SoyBase	N/A	ISS
KOG0698	KOG	Serine/threonine protein phosphatase	JGI		ISS
PTHR13832	Panther	PROTEIN PHOSPHATASE 2C	JGI		ISS
PTHR13832:SF115	Panther	SUBFAMILY NOT NAMED	JGI		ISS
PF00481	PFAM	Protein phosphatase 2C	JGI		ISS
UniRef100_G7KGU9	UniRef	Annotation by Michelle Graham. Most informative UniRef hit: Protein phosphatase 2C n=1 Tax=Medicago truncatula RepID=G7KGU9_MEDTR	SoyBase	E_val: 7.00E-171	ISS
UniRef100_I1M834	UniRef	Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1M834_SOYBN	SoyBase	E_val: 0	ISS

Expression Patterns of Glyma14g07210

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma14g07210 not represented in the dataset	Glyma14g07210 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Paralogs of Glyma14g07210

Paralog	Evidence	Comments
Glyma02g41750	IGC	Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.3.

Gene model name correspondences to Glyma14g07210 Gene Call Version Wm82.a1.v1.1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma.14g066400	Wm82.a2.v1	IGC	As supplied by JGI

References for Glyma14g07210

Schmutz et al. 2010
Genome sequence of the palaeopolyploid soybean
Nature 2010, 463:178-183

Transcripts of Glyma14g07210

Limit To All Plant Sequences

>Glyma14g07210.2   sequence type=transcript   gene model=Glyma14g07210   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
CCAGGTGCCTGCCCCGTTTCCCCTCTTCAAAAGCTTCTCTCCCAACGCCATTTCAGTCGATCCTGCGTTTCATTTCCCATATAAGACTCATAACCGTTCGTTCGTTCGTTCGTTCCCCACTTGCTTTTCATTTTTTTTCTCCCTTTTCGCTAACCTCAAAGAGAGTTCAGTATTTATACAAATAAAAGTTTTTTCTTTTTTTATTTCTGGTTTTCGTTTTGGAATGGCTGGGATTTGCTGTGGAGTTGTTGGAGAAGCCGCCGAGACTTCTTCTCCCATCGAACCCACCTCACGCCCTTCCGCACGCCGGAGTTTGGACCTTTTGCCCTTGAAATACATAGCTGCTGACGTGTCAGTCCCGCCGCTGGAGAACAGCCGGAAGCGCCAGAGGCTGGATAGGCGCGCTTCTCCGGCAAGGGAGTGCGATAACGCGGTTCATAGTTCCAAATCGAAGGTAGTTGAGGTTGTTCCGAATTATTCTTCGAAGAGTCCAACGTTGGACTCCACAAGTCCAACAGTTGTCGAGGAGTATCCGAGGTATGGGGTAACGTCCGTTTGTGGAAGGAGGAGGGACATGGAAGACGCCGTTTCGGTCCGTCCATCGTTTTGCCAAGAAACTTTATCTCATGATAAAAAATTAGGGTTTCATTTCTTCGCTGTTTTCGACGGCCACGGTTGCTCACATGTTGCGACGATGTGCAAGGAGAGGTTACACGAGATAGTGAAGGAAGAGGTTCACCAAGCGAAGGAGAATTTGGAATGGGAATCAACGATGAAAAAGTGTTTCGCGCGCATGGACGAAGAGGTTTTAAGGTGGAGTCAGAACAACGAGACTCCAAGTTGCAGGTGCGAGCTTCAGACCCCGCACTGCGACGCTGTGGGCTCCACCGCAGTTGTGGCCGTCGTCACGCCGGAGAAAATCATCGTGGCAAACTGCGGCGACTCACGCGCCGTGCTTTGCCGCAACAACGTAGCCGTCCCACTCTCCGACGATCACAAGGGGACAATTATCTGAAGCCGTATGTAATTTCGGAACCGGAGGTAACGGTAACTGAGCGTAGTGAGGAGGATGAGTGTTTGATATTAGGGAGTGATGGGCTATGGGACACAGTGCAAAACGACATCGCATGCAAAGTGGTGCGGATGTGTCTGAACGCGCAGAAGCCGCCATCGCCGCCCTCGTCTCCGAGGAGGGAGATGGCGGTGGACTGCTCCGACAAGGCTTGCTCCAACGCCTCCATTCTGCTGACCAAATTGGCGTTGGTTAGGCAGAGTTCCGACAATGTGAGCGTGGTGGTGGTTGATTTGAGGAGAACCTAAAATGGGAACTGTGCGTGGACACCCGATGTTGTGGAATTTTGTTTTTGACAAAAGAAAGGGGAAGAAAATGCAGGGTGTTGCGTGGTGCTTGACTGATTTTTTGTGATTGTAATTTAGATAGTATTGGTAGATAGGTATTTTAATGGACGGGGGTGTGAGAAATTTGTAATTTGTCAGATAATTTATCAACTAATTATGGGAATTTTTAAGAGTAGTGAAAACAATTAGTGTGTCAACCAAGAGGTAAATCAGCCTCCTGAAACACCGTTGTTTTTGTTGTAATTTAGATATATAATTGAAATTGAAACCCAGCTTGGATCTATAAACGCGCCAATTTTGTTGTTTGGTTTGCATTAATAATGGTGTGTTTGATTTAGAATATAAAAATAAAAGCATTTTAAATTAAAATATAGTTTAAAAAGTGCAAGTTTCATTAAAAAAAATACAAAATT

>Glyma14g07210.3   sequence type=transcript   gene model=Glyma14g07210   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
CCAGGTGCCTGCCCCGTTTCCCCTCTTCAAAAGCTTCTCTCCCAACGCCATTTCAGTCGATCCTGCGTTTCATTTCCCATATAAGACTCATAACCGTTCGTTCGTTCGTTCGTTCCCCACTTGCTTTTCATTTTTTTTCTCCCTTTTCGCTAACCTCAAAGAGAGTTCAGTATTTATACAAATAAAAGTTTTTTCTTTTTTTATTTCTGGTTTTCGTTTTGGAATGGCTGGGATTTGCTGTGGAGTTGTTGGAGAAGCCGCCGAGACTTCTTCTCCCATCGAACCCACCTCACGCCCTTCCGCACGCCGGAGTTTGGACCTTTTGCCCTTGAAATACATAGCTGCTGACGTGTCAGTCCCGCCGCTGGAGAACAGCCGGAAGCGCCAGAGGCTGGATAGGCGCGCTTCTCCGGCAAGGGAGTGCGATAACGCGGTTCATAGTTCCAAATCGAAGGTAGTTGAGGTTGTTCCGAATTATTCTTCGAAGAGTCCAACGTTGGACTCCACAAGTCCAACAGTTGTCGAGGAGTATCCGAGGTATGGGGTAACGTCCGTTTGTGGAAGGAGGAGGGACATGGAAGACGCCGTTTCGGTCCGTCCATCGTTTTGCCAAGAAACTTTATCTCATGATAAAAAATTAGGGTTTCATTTCTTCGCTGTTTTCGACGGCCACGGTTGCTCACATGTTGCGACGATGTGCAAGGAGAGGTTACACGAGATAGTGAAGGAAGAGGTTCACCAAGCGAAGGAGAATTTGGAATGGGAATCAACGATGAAAAAGTGTTTCGCGCGCATGGACGAAGAGGTTTTAAGGTGGAGTCAGAACAACGAGACTCCAAGTTGCAGGTGCGAGCTTCAGACCCCGCACTGCGACGCTGTGGGCTCCACCGCAGTTGTGGCCGTCGTCACGCCGGAGAAAATCATCGTGGCAAACTGCGGCGACTCACGCGCCGTGCTTTGCCGCAACAACGTAGCCGTCCCACTCTCCGACGATCACAAGCCGGACCGACCCGACGAGTTGCTTCGGATCCAAGTAGCGGGAGGGCGCGTGATATATTGGGACGGACCTAGAGTGCTTGGGGTGTTGGCTATGTCCAGAGCCATAGGTGAGTAATCAATAAATACACGCGCGGCGCATTATAGCAGATTGGAGGGTTCTTATTTATTTTATTTTATTGGCGAATGTTGGTTGTTTGTTGGGATGGGATTCCAACCCATAACCTATGTCCTTCCCTTTTTCCTTCTTTTCTTTCTTTACAATTTAGACCAACCTTGTATCTCTATCATTCTGAATTATTAACGTTGTCGTGTTTTGTGTTTTGTGTTGTGCAGGGGACAATTATCTGAAGCCGTATGTAATTTCGGAACCGGAGGTAACGGTAACTGAGCGTAGTGAGGAGGATGAGTGTTTGATATTAGGGAGTGATGGGCTATGGGACACAGTGCAAAACGACATCGCATGCAAAGTGGTGCGGATGTGTCTGAACGCGCAGAAGCCGCCATCGCCGCCCTCGTCTCCGAGGAGGGAGATGGCGGTGGACTGCTCCGACAAGGCTTGCTCCAACGCCTCCATTCTGCTGACCAAATTGGCGTTGGTTAGGCAGAGTTCCGACAATGTGAGCGTGGTGGTGGTTGATTTGAGGAGAACCTAAAATGGGAACTGTGCGTGGACACCCGATGTTGTGGAATTTTGTTTTTGACAAAAGAAAGGGGAAGAAAATGCAGGGTGTTGCGTGGTGCTTGACTGATTTTTTGTGATTGTAATTTAGATAGTATTGGTAGATAGGTATTTTAATGGACGGGGGTGTGAGAAATTTGTAATTTGTCAGATAATTTATCAACTAATTATGGGAATTTTTAAGAGTAGTGAAAACAATTAGTGTGTCAACCAAGAGGTAAATCAGCCTCCTGAAACACCGTTGTTTTTGTTGTAATTTAGATATATAATTGAAATTGAAACCCAGCTTGGATCTATAAACGCGCCAATTTTGTTGTTTGGTTTGCATTAATAATGGTGTGTTTGATTTAGAATATAAAAATAAAAGCATTTTAAATTAAAATATAGTTTAAAAAGTGCAAGTTTCATTAAAAAAAATACAAAATT

Coding sequences of Glyma14g07210

Limit To All Plant Sequences

>Glyma14g07210.1   sequence type=CDS   gene model=Glyma14g07210   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGCTGGGATTTGCTGTGGAGTTGTTGGAGAAGCCGCCGAGACTTCTTCTCCCATCGAACCCACCTCACGCCCTTCCGCACGCCGGAGTTTGGACCTTTTGCCCTTGAAATACATAGCTGCTGACGTGTCAGTCCCGCCGCTGGAGAACAGCCGGAAGCGCCAGAGGCTGGATAGGCGCGCTTCTCCGGCAAGGGAGTGCGATAACGCGGTTCATAGTTCCAAATCGAAGGTAGTTGAGGTTGTTCCGAATTATTCTTCGAAGAGTCCAACGTTGGACTCCACAAGTCCAACAGTTGTCGAGGAGTATCCGAGGTATGGGGTAACGTCCGTTTGTGGAAGGAGGAGGGACATGGAAGACGCCGTTTCGGTCCGTCCATCGTTTTGCCAAGAAACTTTATCTCATGATAAAAAATTAGGGTTTCATTTCTTCGCTGTTTTCGACGGCCACGGTTGCTCACATGTTGCGACGATGTGCAAGGAGAGGTTACACGAGATAGTGAAGGAAGAGGTTCACCAAGCGAAGGAGAATTTGGAATGGGAATCAACGATGAAAAAGTGTTTCGCGCGCATGGACGAAGAGGTTTTAAGGTGGAGTCAGAACAACGAGACTCCAAGTTGCAGGTGCGAGCTTCAGACCCCGCACTGCGACGCTGTGGGCTCCACCGCAGTTGTGGCCGTCGTCACGCCGGAGAAAATCATCGTGGCAAACTGCGGCGACTCACGCGCCGTGCTTTGCCGCAACAACGTAGCCGTCCCACTCTCCGACGATCACAAGCCGGACCGACCCGACGAGTTGCTTCGGATCCAAGTAGCGGGAGGGCGCGTGATATATTGGGACGGACCTAGAGTGCTTGGGGTGTTGGCTATGTCCAGAGCCATAGGGGACAATTATCTGAAGCCGTATGTAATTTCGGAACCGGAGGTAACGGTAACTGAGCGTAGTGAGGAGGATGAGTGTTTGATATTAGGGAGTGATGGGCTATGGGACACAGTGCAAAACGACATCGCATGCAAAGTGGTGCGGATGTGTCTGAACGCGCAGAAGCCGCCATCGCCGCCCTCGTCTCCGAGGAGGGAGATGGCGGTGGACTGCTCCGACAAGGCTTGCTCCAACGCCTCCATTCTGCTGACCAAATTGGCGTTGGTTAGGCAGAGTTCCGACAATGTGAGCGTGGTGGTGGTTGATTTGAGGAGAACCTAA

>Glyma14g07210.2   sequence type=CDS   gene model=Glyma14g07210   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGCTGGGATTTGCTGTGGAGTTGTTGGAGAAGCCGCCGAGACTTCTTCTCCCATCGAACCCACCTCACGCCCTTCCGCACGCCGGAGTTTGGACCTTTTGCCCTTGAAATACATAGCTGCTGACGTGTCAGTCCCGCCGCTGGAGAACAGCCGGAAGCGCCAGAGGCTGGATAGGCGCGCTTCTCCGGCAAGGGAGTGCGATAACGCGGTTCATAGTTCCAAATCGAAGGTAGTTGAGGTTGTTCCGAATTATTCTTCGAAGAGTCCAACGTTGGACTCCACAAGTCCAACAGTTGTCGAGGAGTATCCGAGGTATGGGGTAACGTCCGTTTGTGGAAGGAGGAGGGACATGGAAGACGCCGTTTCGGTCCGTCCATCGTTTTGCCAAGAAACTTTATCTCATGATAAAAAATTAGGGTTTCATTTCTTCGCTGTTTTCGACGGCCACGGTTGCTCACATGTTGCGACGATGTGCAAGGAGAGGTTACACGAGATAGTGAAGGAAGAGGTTCACCAAGCGAAGGAGAATTTGGAATGGGAATCAACGATGAAAAAGTGTTTCGCGCGCATGGACGAAGAGGTTTTAAGGTGGAGTCAGAACAACGAGACTCCAAGTTGCAGGTGCGAGCTTCAGACCCCGCACTGCGACGCTGTGGGCTCCACCGCAGTTGTGGCCGTCGTCACGCCGGAGAAAATCATCGTGGCAAACTGCGGCGACTCACGCGCCGTGCTTTGCCGCAACAACGTAGCCGTCCCACTCTCCGACGATCACAAGGGGACAATTATCTGA

>Glyma14g07210.3   sequence type=CDS   gene model=Glyma14g07210   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGCTGGGATTTGCTGTGGAGTTGTTGGAGAAGCCGCCGAGACTTCTTCTCCCATCGAACCCACCTCACGCCCTTCCGCACGCCGGAGTTTGGACCTTTTGCCCTTGAAATACATAGCTGCTGACGTGTCAGTCCCGCCGCTGGAGAACAGCCGGAAGCGCCAGAGGCTGGATAGGCGCGCTTCTCCGGCAAGGGAGTGCGATAACGCGGTTCATAGTTCCAAATCGAAGGTAGTTGAGGTTGTTCCGAATTATTCTTCGAAGAGTCCAACGTTGGACTCCACAAGTCCAACAGTTGTCGAGGAGTATCCGAGGTATGGGGTAACGTCCGTTTGTGGAAGGAGGAGGGACATGGAAGACGCCGTTTCGGTCCGTCCATCGTTTTGCCAAGAAACTTTATCTCATGATAAAAAATTAGGGTTTCATTTCTTCGCTGTTTTCGACGGCCACGGTTGCTCACATGTTGCGACGATGTGCAAGGAGAGGTTACACGAGATAGTGAAGGAAGAGGTTCACCAAGCGAAGGAGAATTTGGAATGGGAATCAACGATGAAAAAGTGTTTCGCGCGCATGGACGAAGAGGTTTTAAGGTGGAGTCAGAACAACGAGACTCCAAGTTGCAGGTGCGAGCTTCAGACCCCGCACTGCGACGCTGTGGGCTCCACCGCAGTTGTGGCCGTCGTCACGCCGGAGAAAATCATCGTGGCAAACTGCGGCGACTCACGCGCCGTGCTTTGCCGCAACAACGTAGCCGTCCCACTCTCCGACGATCACAAGCCGGACCGACCCGACGAGTTGCTTCGGATCCAAGTAGCGGGAGGGCGCGTGATATATTGGGACGGACCTAGAGTGCTTGGGGTGTTGGCTATGTCCAGAGCCATAGGTGAGTAA

Predicted protein sequences of Glyma14g07210

Limit To All Plant Sequences

>Glyma14g07210.1   sequence type=predicted peptide   gene model=Glyma14g07210   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MAGICCGVVGEAAETSSPIEPTSRPSARRSLDLLPLKYIAADVSVPPLENSRKRQRLDRRASPARECDNAVHSSKSKVVEVVPNYSSKSPTLDSTSPTVVEEYPRYGVTSVCGRRRDMEDAVSVRPSFCQETLSHDKKLGFHFFAVFDGHGCSHVATMCKERLHEIVKEEVHQAKENLEWESTMKKCFARMDEEVLRWSQNNETPSCRCELQTPHCDAVGSTAVVAVVTPEKIIVANCGDSRAVLCRNNVAVPLSDDHKPDRPDELLRIQVAGGRVIYWDGPRVLGVLAMSRAIGDNYLKPYVISEPEVTVTERSEEDECLILGSDGLWDTVQNDIACKVVRMCLNAQKPPSPPSSPRREMAVDCSDKACSNASILLTKLALVRQSSDNVSVVVVDLRRT*

>Glyma14g07210.2   sequence type=predicted peptide   gene model=Glyma14g07210   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MAGICCGVVGEAAETSSPIEPTSRPSARRSLDLLPLKYIAADVSVPPLENSRKRQRLDRRASPARECDNAVHSSKSKVVEVVPNYSSKSPTLDSTSPTVVEEYPRYGVTSVCGRRRDMEDAVSVRPSFCQETLSHDKKLGFHFFAVFDGHGCSHVATMCKERLHEIVKEEVHQAKENLEWESTMKKCFARMDEEVLRWSQNNETPSCRCELQTPHCDAVGSTAVVAVVTPEKIIVANCGDSRAVLCRNNVAVPLSDDHKGTII*

>Glyma14g07210.3   sequence type=predicted peptide   gene model=Glyma14g07210   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MAGICCGVVGEAAETSSPIEPTSRPSARRSLDLLPLKYIAADVSVPPLENSRKRQRLDRRASPARECDNAVHSSKSKVVEVVPNYSSKSPTLDSTSPTVVEEYPRYGVTSVCGRRRDMEDAVSVRPSFCQETLSHDKKLGFHFFAVFDGHGCSHVATMCKERLHEIVKEEVHQAKENLEWESTMKKCFARMDEEVLRWSQNNETPSCRCELQTPHCDAVGSTAVVAVVTPEKIIVANCGDSRAVLCRNNVAVPLSDDHKPDRPDELLRIQVAGGRVIYWDGPRVLGVLAMSRAIGE*

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