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Report for Sequence Feature Glyma14g05810
Feature Type: gene_model
Chromosome: Gm14
Start: 4199112
stop: 4205004
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma14g05810
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT5G48220 AT
Annotation by Michelle Graham. TAIR10: Aldolase-type TIM barrel family protein | chr5:19549930-19552046 FORWARD LENGTH=379
SoyBase E_val: 0 ISS
GO:0006568 GO-bp
Annotation by Michelle Graham. GO Biological Process: tryptophan metabolic process
SoyBase N/A ISS
GO:0008152 GO-bp
Annotation by Michelle Graham. GO Biological Process: metabolic process
SoyBase N/A ISS
GO:0005739 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: mitochondrion
SoyBase N/A ISS
GO:0009507 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: chloroplast
SoyBase N/A ISS
GO:0009534 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: chloroplast thylakoid
SoyBase N/A ISS
GO:0009570 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: chloroplast stroma
SoyBase N/A ISS
GO:0003824 GO-mf
Annotation by Michelle Graham. GO Molecular Function: catalytic activity
SoyBase N/A ISS
GO:0004425 GO-mf
Annotation by Michelle Graham. GO Molecular Function: indole-3-glycerol-phosphate synthase activity
SoyBase N/A ISS
KOG4201
KOG
Anthranilate synthase component II
JGI ISS
PTHR22854 Panther
TRYPTOPHAN BIOSYNTHESIS PROTEIN
JGI ISS
PTHR22854:SF2 Panther
TRYPTOPHAN BIOSYNTHESIS PROTEIN, TRPC
JGI ISS
PF00218 PFAM
Indole-3-glycerol phosphate synthase
JGI ISS
UniRef100_G7KH34 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: Indole-3-glycerol phosphate synthase n=2 Tax=Medicago truncatula RepID=G7KH34_MEDTR
SoyBase E_val: 0 ISS
UniRef100_I1M7M5 UniRef
Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=2 Tax=Glycine max RepID=I1M7M5_SOYBN
SoyBase E_val: 0 ISS
Expression Patterns of Glyma14g05810
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE
Paralogs of Glyma14g05810
Paralog Evidence Comments
Glyma02g42680 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.3.
Gene model name correspondences to Glyma14g05810 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.14g053300 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma14g05810
Transcripts of Glyma14g05810
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma14g05810.2 sequence type=transcript gene model=Glyma14g05810 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
GCATATCCAAGAATCAAACTAGGATCTCTTATTAAGTTAAAATAACTTCAAGCTCGGTTGATCCAAGCCAGCATAGCAAAACATTTGATAGAAGAGAGGCAAATTCATACTGTAAAGTTAAATACTTCGCGGTGAAAGAGAAAAAAAGGCACAGACCAAAATCAATGTAATGCCCTTCAATTTTAATTTTGTGCCATTTTTAGCTCTTTACATGTGCCAATCCAATCCCAGCCGTGGTACATTCTCTTGGGGCCAGAAAAACCATGAACACGCCGTGGCGTCGGAATTGAATGCGCGCGTGCGCACGTGTCGAACGCTACAACAATTTTCTTCTCCAATTCAATACTAGTACTATAACATAGACGATTAGACGGTGTGTTCTTCTTTTAAACCCTTGTTTCACTTTCCGTTTCATCTTTCTTTTTTGTTGCTCAGCAATCCCTCCCATTTTTTTTCCTTCAATCTGCTTCAATGGAAGGTTTGGCTTCCCTCAAGGCTCCCTTTCCGGCCACCCCATTTCTCTCTTCCAGACCCAGAACCTCTATTCTTCCATCCCAAGCCAGTTTTCGTAAAAGAAGCTCCTTTTTATCCTTTTCTGTTCATGCCCAGGTGGAGTCTGATGATGGTTCAGCTGTAGTAGCCACATCTGGTGAATCTGTGACAGAGGTTCTGAAAATTAAGGAGTGGGAGGTGGGAATGTTCCAAAATGAGGTTGCAGCTAGCCAGGGTATAAGAATAAGGAGAAGGCCTCCATCTGGACCCCCTTTGCATTATGTAGGACCATTTCAATTCAGGTTGCAGAATGAGGGCAATACGCCCCGGAACATTTTGGAAGAGATTGTGTGGAATAAGGACACAGAAGTCTCACAGCTTAAAGAAAGAAAACCCCTTGGCGTGCTGAAGAAAGCTCTTGAAAATGCACCTCCTGCTAGGGATTTTATTGGTGCTCTAAAGGCAGCCAACGAACGAACTGGACTTCCAGGGTTGATTGCTGAAGTGAAGAAGGCATCACCAAGTAGAGGTATCTTGAGAGAAGACTTTGACCCAGTTGAAATTGCTAAGGCTTATGAGAAAGGTGGAGCAGCATGTCTAAGTGTTTTGACAGATGAAAAGTATTTTAAGGGAAGCTTTGAAAATCTTGAGGCAATAAGAAAGGCTGGCATAAAGTGCCCTTTGTTGTGCAAAGAATTCATCATAGATGCATGGCAACTCTACTATGCTCGAACTAAAGGTGCAGATGCAGTCCTTTTAATTGCTGCTGTTTTGCCTGATCTTGACATCAAATACATGATTAAGATATGCAAATTACTCGGATTGACTGCGCTTGTTGAGGTTCATGATGAGAGGGAATTTGATCGTGTTCTTGCAATAGAGGGGATTGAGCTTATTGGCATTAACAACCGCAATCTTGCTTTTCTTTTTGGGGATTGCAGAAACATTTGAGTTGGATATCAGCATCACAAAGAAACTTCTTGAAGGAGAGCGAGGCAAAATAATCCACGAGAGAGGCATAATTATGGTTGGGGAATCTGGTCTCTTTACCCCGGACGATATTGCCTATGTTCAGGAAGCTGGTGTTAAAGCTATATTGGTTGGAGAGTCTATTGTAAAACAAAGTGATCCTGGAAAGGGAATCAGCAATCTCTTTGGCAAAGATATCTCTTTGGGTTGAAGTGAGCTATATTTCTTGAGATATAAGCTTTTGAGATGACAGATTTTGCTCAGGTTAATGATTTGATACCTTCGACCTTTGCTTGTACCAAATTATCAAAATCTTACCAGTAGCAAATATGTACCAAAATAAACTCTTATTGTTTAATAATACTTTGCAACTAAATGATATCATTTTGAGATAATAGTTTGGCGACAATTTGTCTGTGTCCTTAACTTTGCATTGAATCTCAATCCTTCATCTTGTAAAATCATATTTCGTTTTCGCCACTAACAAATTCGAGTAGTTG
>Glyma14g05810.4 sequence type=transcript gene model=Glyma14g05810 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
GCATATCCAAGAATCAAACTAGGATCTCTTATTAAGTTAAAATAACTTCAAGCTCGGTTGATCCAAGCCAGCATAGCAAAACATTTGATAGAAGAGAGGCAAATTCATACTGTAAAGTTAAATACTTCGCGGTGAAAGAGAAAAAAAGGCACAGACCAAAATCAATGTAATGCCCTTCAATTTTAATTTTGTGCCATTTTTAGCTCTTTACATGTGCCAATCCAATCCCAGCCGTGGTACATTCTCTTGGGGCCAGAAAAACCATGAACACGCCGTGGCGTCGGAATTGAATGCGCGCGTGCGCACGTGTCGAACGCTACAACAATTTTCTTCTCCAATTCAATACTAGTACTATAACATAGACGATTAGACGGTTTGGCTTCCCTCAAGGCTCCCTTTCCGGCCACCCCATTTCTCTCTTCCAGACCCAGAACCTCTATTCTTCCATCCCAAGCCAGTTTTCGTAAAAGAAGCTCCTTTTTATCCTTTTCTGTTCATGCCCAGGTGGAGTCTGATGATGGTTCAGCTGTAGTAGCCACATCTGGTGAATCTGTGACAGAGGTTCTGAAAATTAAGGAGTGGGAGGTGGGAATGTTCCAAAATGAGGTTGCAGCTAGCCAGGGTATAAGAATAAGGAGAAGGCCTCCATCTGGACCCCCTTTGCATTATGTAGGACCATTTCAATTCAGGTTGCAGAATGAGGGCAATACGCCCCGGAACATTTTGGAAGAGATTGTGTGGAATAAGGACACAGAAGTCTCACAGCTTAAAGAAAGAAAACCCCTTGGCGTGCTGAAGAAAGCTCTTGAAAATGCACCTCCTGCTAGGGATTTTATTGGTGCTCTAAAGGCAGCCAACGAACGAACTGGACTTCCAGGGTTGATTGCTGAAGTGAAGAAGGCATCACCAAGTAGAGGTATCTTGAGAGAAGACTTTGACCCAGTTGAAATTGCTAAGGCTTATGAGAAAGGTGGAGCAGCATGTCTAAGTGTTTTGACAGATGAAAAGTATTTTAAGGGAAGCTTTGAAAATCTTGAGGCAATAAGAAAGGCTGGCATAAAGTGCCCTTTGTTGTGCAAAGAATTCATCATAGATGCATGGCAACTCTACTATGCTCGAACTAAAGGTGCAGATGCAGTCCTTTTAATTGCTGCTGTTTTGCCTGATCTTGACATCAAATACATGATTAAGATATGCAAATTACTCGGATTGACTGCGCTTGTTGAGGTTCATGATGAGAGGGAATTTGATCGTGTTCTTGCAATAGAGGGGATTGAGCTTATTGGCATTAACAACCGCAATCTTGAAACATTTGAGTTGGATATCAGCATCACAAAGAAACTTCTTGAAGGAGAGCGAGGCAAAATAATCCACGAGAGAGGCATAATTATGGTTGGGGAATCTGGTCTCTTTACCCCGGACGATATTGCCTATGTTCAGGAAGCTGGTGTTAAAGCTATATTGGTTGGAGAGTCTATTGTAAAACAAAGTGATCCTGGAAAGGGAATCAGCAATCTCTTTGGCAAAGATATCTCTTTGGGTTGAAGTGAGCTATATTTCTTGAGATATAAGCTTTTGAGATGACAGATTTTGCTCAGGTTAATGATTTGATACCTTCGACCTTTGCTTGTACCAAATTATCAAAATCTTACCAGTAGCAAATATGTACCAAAATAAACTCTTATTGTTTAATAATACTTTGCAACTAAATGATATCATTTTGAGATAATAGTTTGGCGACAATTTGTCTGTGTCCTTAACTTTGCATTGAATCTCAATCCTTCATCTTGTAAAATCATATTTCGTTTTCGCCACTAACAAATTCGAGTAGTTG
Coding sequences of Glyma14g05810
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma14g05810.1 sequence type=CDS gene model=Glyma14g05810 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGGAAGGTTTGGCTTCCCTCAAGGCTCCCTTTCCGGCCACCCCATTTCTCTCTTCCAGACCCAGAACCTCTATTCTTCCATCCCAAGCCAGTTTTCGTAAAAGAAGCTCCTTTTTATCCTTTTCTGTTCATGCCCAGGTGGAGTCTGATGATGGTTCAGCTGTAGTAGCCACATCTGGTGAATCTGTGACAGAGGTTCTGAAAATTAAGGAGTGGGAGGTGGGAATGTTCCAAAATGAGGTTGCAGCTAGCCAGGGTATAAGAATAAGGAGAAGGCCTCCATCTGGACCCCCTTTGCATTATGTAGGACCATTTCAATTCAGGTTGCAGAATGAGGGCAATACGCCCCGGAACATTTTGGAAGAGATTGTGTGGAATAAGGACACAGAAGTCTCACAGCTTAAAGAAAGAAAACCCCTTGGCGTGCTGAAGAAAGCTCTTGAAAATGCACCTCCTGCTAGGGATTTTATTGGTGCTCTAAAGGCAGCCAACGAACGAACTGGACTTCCAGGGTTGATTGCTGAAGTGAAGAAGGCATCACCAAGTAGAGGTATCTTGAGAGAAGACTTTGACCCAGTTGAAATTGCTAAGGCTTATGAGAAAGGTGGAGCAGCATGTCTAAGTGTTTTGACAGATGAAAAGTATTTTAAGGGAAGCTTTGAAAATCTTGAGGCAATAAGAAAGGCTGGCATAAAGTGCCCTTTGTTGTGCAAAGAATTCATCATAGATGCATGGCAACTCTACTATGCTCGAACTAAAGGTGCAGATGCAGTCCTTTTAATTGCTGCTGTTTTGCCTGATCTTGACATCAAATACATGATTAAGATATGCAAATTACTCGGATTGACTGCGCTTGTTGAGGTTCATGATGAGAGGGAATTTGATCGTGTTCTTGCAATAGAGGGGATTGAGCTTATTGGCATTAACAACCGCAATCTTGAAACATTTGAGTTGGATATCAGCATCACAAAGAAACTTCTTGAAGGAGAGCGAGGCAAAATAATCCACGAGAGAGGCATAATTATGGTTGGGGAATCTGGTCTCTTTACCCCGGACGATATTGCCTATGTTCAGGAAGCTGGTGTTAAAGCTATATTGGTTGGAGAGTCTATTGTAAAACAAAGTGATCCTGGAAAGGGAATCAGCAATCTCTTTGGCAAAGATATCTCTTTGGGTTGA
>Glyma14g05810.2 sequence type=CDS gene model=Glyma14g05810 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGGAAGGTTTGGCTTCCCTCAAGGCTCCCTTTCCGGCCACCCCATTTCTCTCTTCCAGACCCAGAACCTCTATTCTTCCATCCCAAGCCAGTTTTCGTAAAAGAAGCTCCTTTTTATCCTTTTCTGTTCATGCCCAGGTGGAGTCTGATGATGGTTCAGCTGTAGTAGCCACATCTGGTGAATCTGTGACAGAGGTTCTGAAAATTAAGGAGTGGGAGGTGGGAATGTTCCAAAATGAGGTTGCAGCTAGCCAGGGTATAAGAATAAGGAGAAGGCCTCCATCTGGACCCCCTTTGCATTATGTAGGACCATTTCAATTCAGGTTGCAGAATGAGGGCAATACGCCCCGGAACATTTTGGAAGAGATTGTGTGGAATAAGGACACAGAAGTCTCACAGCTTAAAGAAAGAAAACCCCTTGGCGTGCTGAAGAAAGCTCTTGAAAATGCACCTCCTGCTAGGGATTTTATTGGTGCTCTAAAGGCAGCCAACGAACGAACTGGACTTCCAGGGTTGATTGCTGAAGTGAAGAAGGCATCACCAAGTAGAGGTATCTTGAGAGAAGACTTTGACCCAGTTGAAATTGCTAAGGCTTATGAGAAAGGTGGAGCAGCATGTCTAAGTGTTTTGACAGATGAAAAGTATTTTAAGGGAAGCTTTGAAAATCTTGAGGCAATAAGAAAGGCTGGCATAAAGTGCCCTTTGTTGTGCAAAGAATTCATCATAGATGCATGGCAACTCTACTATGCTCGAACTAAAGGTGCAGATGCAGTCCTTTTAATTGCTGCTGTTTTGCCTGATCTTGACATCAAATACATGATTAAGATATGCAAATTACTCGGATTGACTGCGCTTGTTGAGGTTCATGATGAGAGGGAATTTGATCGTGTTCTTGCAATAGAGGGGATTGAGCTTATTGGCATTAACAACCGCAATCTTGCTTTTCTTTTTGGGGATTGCAGAAACATTTGA
>Glyma14g05810.4 sequence type=CDS gene model=Glyma14g05810 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGTTCCAAAATGAGGTTGCAGCTAGCCAGGGTATAAGAATAAGGAGAAGGCCTCCATCTGGACCCCCTTTGCATTATGTAGGACCATTTCAATTCAGGTTGCAGAATGAGGGCAATACGCCCCGGAACATTTTGGAAGAGATTGTGTGGAATAAGGACACAGAAGTCTCACAGCTTAAAGAAAGAAAACCCCTTGGCGTGCTGAAGAAAGCTCTTGAAAATGCACCTCCTGCTAGGGATTTTATTGGTGCTCTAAAGGCAGCCAACGAACGAACTGGACTTCCAGGGTTGATTGCTGAAGTGAAGAAGGCATCACCAAGTAGAGGTATCTTGAGAGAAGACTTTGACCCAGTTGAAATTGCTAAGGCTTATGAGAAAGGTGGAGCAGCATGTCTAAGTGTTTTGACAGATGAAAAGTATTTTAAGGGAAGCTTTGAAAATCTTGAGGCAATAAGAAAGGCTGGCATAAAGTGCCCTTTGTTGTGCAAAGAATTCATCATAGATGCATGGCAACTCTACTATGCTCGAACTAAAGGTGCAGATGCAGTCCTTTTAATTGCTGCTGTTTTGCCTGATCTTGACATCAAATACATGATTAAGATATGCAAATTACTCGGATTGACTGCGCTTGTTGAGGTTCATGATGAGAGGGAATTTGATCGTGTTCTTGCAATAGAGGGGATTGAGCTTATTGGCATTAACAACCGCAATCTTGAAACATTTGAGTTGGATATCAGCATCACAAAGAAACTTCTTGAAGGAGAGCGAGGCAAAATAATCCACGAGAGAGGCATAATTATGGTTGGGGAATCTGGTCTCTTTACCCCGGACGATATTGCCTATGTTCAGGAAGCTGGTGTTAAAGCTATATTGGTTGGAGAGTCTATTGTAAAACAAAGTGATCCTGGAAAGGGAATCAGCAATCTCTTTGGCAAAGATATCTCTTTGGGTTGA
Predicted protein sequences of Glyma14g05810
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma14g05810.1 sequence type=predicted peptide gene model=Glyma14g05810 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MEGLASLKAPFPATPFLSSRPRTSILPSQASFRKRSSFLSFSVHAQVESDDGSAVVATSGESVTEVLKIKEWEVGMFQNEVAASQGIRIRRRPPSGPPLHYVGPFQFRLQNEGNTPRNILEEIVWNKDTEVSQLKERKPLGVLKKALENAPPARDFIGALKAANERTGLPGLIAEVKKASPSRGILREDFDPVEIAKAYEKGGAACLSVLTDEKYFKGSFENLEAIRKAGIKCPLLCKEFIIDAWQLYYARTKGADAVLLIAAVLPDLDIKYMIKICKLLGLTALVEVHDEREFDRVLAIEGIELIGINNRNLETFELDISITKKLLEGERGKIIHERGIIMVGESGLFTPDDIAYVQEAGVKAILVGESIVKQSDPGKGISNLFGKDISLG*
>Glyma14g05810.2 sequence type=predicted peptide gene model=Glyma14g05810 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MEGLASLKAPFPATPFLSSRPRTSILPSQASFRKRSSFLSFSVHAQVESDDGSAVVATSGESVTEVLKIKEWEVGMFQNEVAASQGIRIRRRPPSGPPLHYVGPFQFRLQNEGNTPRNILEEIVWNKDTEVSQLKERKPLGVLKKALENAPPARDFIGALKAANERTGLPGLIAEVKKASPSRGILREDFDPVEIAKAYEKGGAACLSVLTDEKYFKGSFENLEAIRKAGIKCPLLCKEFIIDAWQLYYARTKGADAVLLIAAVLPDLDIKYMIKICKLLGLTALVEVHDEREFDRVLAIEGIELIGINNRNLAFLFGDCRNI*
>Glyma14g05810.4 sequence type=predicted peptide gene model=Glyma14g05810 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MFQNEVAASQGIRIRRRPPSGPPLHYVGPFQFRLQNEGNTPRNILEEIVWNKDTEVSQLKERKPLGVLKKALENAPPARDFIGALKAANERTGLPGLIAEVKKASPSRGILREDFDPVEIAKAYEKGGAACLSVLTDEKYFKGSFENLEAIRKAGIKCPLLCKEFIIDAWQLYYARTKGADAVLLIAAVLPDLDIKYMIKICKLLGLTALVEVHDEREFDRVLAIEGIELIGINNRNLETFELDISITKKLLEGERGKIIHERGIIMVGESGLFTPDDIAYVQEAGVKAILVGESIVKQSDPGKGISNLFGKDISLG*