Glyma14g04710 - SoyBase

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Report for Sequence Feature Glyma14g04710

Feature Type:	gene_model
Chromosome:	Gm14
Start:	3247315
stop:	3250356
Source:	JGI
Version:	Wm82.a1.v1.1
High confidence:	yes

A newer version of this gene model can be found here:

Annotations for Glyma14g04710

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT3G05660	AT	Annotation by Michelle Graham. TAIR10: receptor like protein 33 \| chr3:1649258-1652001 REVERSE LENGTH=875	SoyBase	E_val: 2.00E-133	ISS
GO:0000165	GO-bp	Annotation by Michelle Graham. GO Biological Process: MAPK cascade	SoyBase	N/A	ISS
GO:0006355	GO-bp	Annotation by Michelle Graham. GO Biological Process: regulation of transcription, DNA-dependent	SoyBase	N/A	ISS
GO:0006457	GO-bp	Annotation by Michelle Graham. GO Biological Process: protein folding	SoyBase	N/A	ISS
GO:0006612	GO-bp	Annotation by Michelle Graham. GO Biological Process: protein targeting to membrane	SoyBase	N/A	ISS
GO:0006952	GO-bp	Annotation by Michelle Graham. GO Biological Process: defense response	SoyBase	N/A	ISS
GO:0007165	GO-bp	Annotation by Michelle Graham. GO Biological Process: signal transduction	SoyBase	N/A	ISS
GO:0009408	GO-bp	Annotation by Michelle Graham. GO Biological Process: response to heat	SoyBase	N/A	ISS
GO:0009617	GO-bp	Annotation by Michelle Graham. GO Biological Process: response to bacterium	SoyBase	N/A	ISS
GO:0009644	GO-bp	Annotation by Michelle Graham. GO Biological Process: response to high light intensity	SoyBase	N/A	ISS
GO:0009862	GO-bp	Annotation by Michelle Graham. GO Biological Process: systemic acquired resistance, salicylic acid mediated signaling pathway	SoyBase	N/A	ISS
GO:0009867	GO-bp	Annotation by Michelle Graham. GO Biological Process: jasmonic acid mediated signaling pathway	SoyBase	N/A	ISS
GO:0010310	GO-bp	Annotation by Michelle Graham. GO Biological Process: regulation of hydrogen peroxide metabolic process	SoyBase	N/A	ISS
GO:0010363	GO-bp	Annotation by Michelle Graham. GO Biological Process: regulation of plant-type hypersensitive response	SoyBase	N/A	ISS
GO:0031348	GO-bp	Annotation by Michelle Graham. GO Biological Process: negative regulation of defense response	SoyBase	N/A	ISS
GO:0034976	GO-bp	Annotation by Michelle Graham. GO Biological Process: response to endoplasmic reticulum stress	SoyBase	N/A	ISS
GO:0035304	GO-bp	Annotation by Michelle Graham. GO Biological Process: regulation of protein dephosphorylation	SoyBase	N/A	ISS
GO:0042542	GO-bp	Annotation by Michelle Graham. GO Biological Process: response to hydrogen peroxide	SoyBase	N/A	ISS
GO:0005886	GO-cc	Annotation by Michelle Graham. GO Cellular Compartment: plasma membrane	SoyBase	N/A	ISS
GO:0009507	GO-cc	Annotation by Michelle Graham. GO Cellular Compartment: chloroplast	SoyBase	N/A	ISS
GO:0016301	GO-mf	Annotation by Michelle Graham. GO Molecular Function: kinase activity	SoyBase	N/A	ISS
KOG0472	KOG	Leucine-rich repeat protein	JGI		ISS
PTHR24420	Panther	FAMILY NOT NAMED	JGI		ISS
PTHR24420:SF473	Panther	SUBFAMILY NOT NAMED	JGI		ISS
PF00560	PFAM	Leucine Rich Repeat	JGI		ISS
PF08263	PFAM	Leucine rich repeat N-terminal domain	JGI		ISS
UniRef100_C6ZS07	UniRef	Annotation by Michelle Graham. Most informative UniRef hit: Disease resistance protein n=1 Tax=Glycine max RepID=C6ZS07_SOYBN	SoyBase	E_val: 0	ISS
UniRef100_I1M7B5	UniRef	Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein (Fragment) n=1 Tax=Glycine max RepID=I1M7B5_SOYBN	SoyBase	E_val: 0	ISS

Expression Patterns of Glyma14g04710

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology


Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma14g04710 Gene Call Version Wm82.a1.v1.1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma.14g042700	Wm82.a2.v1	IGC	As supplied by JGI

References for Glyma14g04710

Schmutz et al. 2010
Genome sequence of the palaeopolyploid soybean
Nature 2010, 463:178-183

Coding sequences of Glyma14g04710

Limit To All Plant Sequences

>Glyma14g04710.2   sequence type=CDS   gene model=Glyma14g04710   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGAATATCAATTACATTCTTTTCTGGCTTCTACTCCCATACTTCATCTTAGCTTCTTCTTCCTCTTTCTGCAACCACCATGACACCTCTGCCTTACTACTTTTCAAAAACTCATTTACTCTCAACACTTCACTTTATGATAACTCTTATTCTTTAAAGACAGAATCATGGAAAAACGGAACAGATTGTTGTGAGTGGGATGGGGTCACGTGCGACACCATCTCAGGCCACGTGATTGATCTTGACCTTAGCTGCAGTAATCTTCAAGGTCAACTCCATCCCAACAGCACCATCTTCAGCCTAAGACACCTTCAACAACTCAACCTAGCCTATAATGATTTTTCAGGCTCTTCATTATATTCTGCAATTGGTGATCTCGTCAATCTCATGCATCTAAATTTGTTATCCTCTCAAATCAGTGGTGACATTCCATCCACAATCTCTCATTTGTCCAAATTACTGTCACTTCAACTCGGTGGCGACCAGAGAATGAGAGTTGATCCATACACATGGAACAAACTCATTCAAAACGCAACTAATTTAAGAGAGCTTTCTTTAGAACGCATGGACATGTCTTCTATCGGAGACAACTCTTTGTCATTGCTAACCAATCTGTCTTCCTCTCTCATCTCTCTTAGTCTCTTTGACACCGAATTGCAAGGGAATCTATCGAGTGACATCCTCTCTTTACCCAATCTTCAAATACTAGATTTGAGTTTTAATAAAGACCTGGGAGGTGAACTTCCAAAGTCCAACCGGAGTACTCCACTGAGCTACTTGGATCTCTCTGATACTGCTTTCTCGGGAAACATTCCCGATTCCATTGCCCATTTGGAGTCTCTTAACACACTATTTCTAGACAGTTGCAATTTTGATGGACTGATTCCCTCATCATTGTTTAATCTAACTCAACTCTCCAGTATAGATCTATCGTTTAATAAATTAGTTGGCCCCATTCCATATTGGTGTTATTCTTTGCCTTCCTTGTTATGGTTGGATCTTAGCCACAACCACCTCACGGGGTCCATTGGTGAATTCTCATCTTATTCTTTGGAATACTTGATCCTCTCTAATAACAAACTGCAAGCACCACTTCAAAATCTTCTCCAACTAGATCTTTCTCATAACAGCATTCGTGGAAGCATTCCCCAGTGGTTTCATGAGAAGCTCTTGCACTCCTGGAATAACATTGGTTATATTGACCTCAGTTTCAACAAGTTGCAAGGAGATCTCCCAATTCCACCCAATGGCATTCGATACTTTTTAGTCTCAAATAATGAGCTGACCGGGAACATTCCTTCAGCAATGTGCAATGCAAGCTCCCTCTATATACTCAACTTGGCTCATAACAACTTGACAGGCCCCATTCCTTCAGCAATGTGCAATGCAAGCTCCCTCAATATACTCAACTTGGCTCAAAACAACTTGACAGGCCACATTCCACAATGTCTCGGAACATTTCCTTCTCTTTGGGCATTGGATTTGCAAAAGAACAACCTTTACGGAAACATACCTGCGAACTTTTCTAAGGGAAATGCATTGGAGACTATAAAGTTGAATGGCAACCAATTGGACGGACAATTACCTCGGTGTTTGGCCCAATGCACAAATTTGGAAGTTTTGGACCTGGCAGACAATAACATAGAGGATACATTTCCCCATTGGCTAGAAAGCCTCCAGGAGTTACAGGTACTCAGTTTGCGATCAAATAAGTTTCATGGTGTCATCACTTGTTTCGGTGCCAAGCATTCATTTCCCAGGCTGAGAATTTTTGATGTGTCAAATAACAATTTTAGTGGACCCTTGCCAGCATCATACATCAAGAACTTTCAAGGAATGGTGAGTGTGAATGACAACCAAACTGGTTTGAAATATATGGGTAACCAAGGTTTCTATAATGATTCAGTCGTGGTTGTAATGAAAGGTCGATACATGGAGCTTGAGAGGATATTAACTATTTTCACAACCATTGATTTATCAAATAATATGTTTGAAGGAGAACTTCTGAAAGTCATTGGACAATTGCATTTTCTTAAAGGGCTTAACCTTTCGCACAATGCAATCAATGGTACCATTCCACGATCCTTGGGTTATTTAAGAAATTTGGAATGGTTGGACCTCTCGTGGAACCAGTTGAAAGGAGAGATTCCAGTGGCTTTGATCAATTTGAATTTTCTGGCTATGTTGAACCTTTCACAAAACCAGTTTCAGGGTATCATACCTACAGGTGGACAATTTAACACATTTGAAAATGATTCCTATGGTGGAAATCCAATGCTATGTGGATTCCCTTTGTCAAAATCCTGCAATAAGGATGAAGATTGGCCACCACATTCAACATTTCAGCATGCAGAATCAGGATTTGGCTGGAAAGCTGTAGCGGTAGGATTTGCATGTGGGTTGGTATTTGGAATGCTTTTGGGATATAATGTTTTCATGACTGGAAAACCGCAATCGCTCGCGAGACTTGTTGAAGGTGTGCTTAATTAA

Predicted protein sequences of Glyma14g04710

Limit To All Plant Sequences

>Glyma14g04710.2   sequence type=predicted peptide   gene model=Glyma14g04710   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MNINYILFWLLLPYFILASSSSFCNHHDTSALLLFKNSFTLNTSLYDNSYSLKTESWKNGTDCCEWDGVTCDTISGHVIDLDLSCSNLQGQLHPNSTIFSLRHLQQLNLAYNDFSGSSLYSAIGDLVNLMHLNLLSSQISGDIPSTISHLSKLLSLQLGGDQRMRVDPYTWNKLIQNATNLRELSLERMDMSSIGDNSLSLLTNLSSSLISLSLFDTELQGNLSSDILSLPNLQILDLSFNKDLGGELPKSNRSTPLSYLDLSDTAFSGNIPDSIAHLESLNTLFLDSCNFDGLIPSSLFNLTQLSSIDLSFNKLVGPIPYWCYSLPSLLWLDLSHNHLTGSIGEFSSYSLEYLILSNNKLQAPLQNLLQLDLSHNSIRGSIPQWFHEKLLHSWNNIGYIDLSFNKLQGDLPIPPNGIRYFLVSNNELTGNIPSAMCNASSLYILNLAHNNLTGPIPSAMCNASSLNILNLAQNNLTGHIPQCLGTFPSLWALDLQKNNLYGNIPANFSKGNALETIKLNGNQLDGQLPRCLAQCTNLEVLDLADNNIEDTFPHWLESLQELQVLSLRSNKFHGVITCFGAKHSFPRLRIFDVSNNNFSGPLPASYIKNFQGMVSVNDNQTGLKYMGNQGFYNDSVVVVMKGRYMELERILTIFTTIDLSNNMFEGELLKVIGQLHFLKGLNLSHNAINGTIPRSLGYLRNLEWLDLSWNQLKGEIPVALINLNFLAMLNLSQNQFQGIIPTGGQFNTFENDSYGGNPMLCGFPLSKSCNKDEDWPPHSTFQHAESGFGWKAVAVGFACGLVFGMLLGYNVFMTGKPQSLARLVEGVLN*

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