Glyma14g04700 - SoyBase

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Report for Sequence Feature Glyma14g04700

Feature Type:	gene_model
Chromosome:	Gm14
Start:	3239969
stop:	3246082
Source:	JGI
Version:	Wm82.a1.v1.1
High confidence:	yes

A newer version of this gene model can be found here:

Annotations for Glyma14g04700

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT5G42250	AT	Annotation by Michelle Graham. TAIR10: Zinc-binding alcohol dehydrogenase family protein \| chr5:16894087-16897450 FORWARD LENGTH=390	SoyBase	E_val: 1.00E-31	ISS
GO:0055114	GO-bp	Annotation by Michelle Graham. GO Biological Process: oxidation-reduction process	SoyBase	N/A	ISS
GO:0005737	GO-cc	Annotation by Michelle Graham. GO Cellular Compartment: cytoplasm	SoyBase	N/A	ISS
GO:0000166	GO-mf	Annotation by Michelle Graham. GO Molecular Function: nucleotide binding	SoyBase	N/A	ISS
GO:0008270	GO-mf	Annotation by Michelle Graham. GO Molecular Function: zinc ion binding	SoyBase	N/A	ISS
GO:0016491	GO-mf	Annotation by Michelle Graham. GO Molecular Function: oxidoreductase activity	SoyBase	N/A	ISS
PTHR11695	Panther	ALCOHOL DEHYDROGENASE RELATED	JGI		ISS
PTHR11695:SF4	Panther	ARYL-ALCOHOL DEHYDROGENASE	JGI		ISS
UniRef100_G7J606	UniRef	Annotation by Michelle Graham. Most informative UniRef hit: Alcohol dehydrogenase ADH n=1 Tax=Medicago truncatula RepID=G7J606_MEDTR	SoyBase	E_val: 2.00E-39	ISS
UniRef100_I1M7B4	UniRef	Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1M7B4_SOYBN	SoyBase	E_val: 0	ISS

Expression Patterns of Glyma14g04700

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology


Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma14g04700 Gene Call Version Wm82.a1.v1.1

Corresponding Name	Annotation Version	Evidence	Comments

References for Glyma14g04700

Schmutz et al. 2010
Genome sequence of the palaeopolyploid soybean
Nature 2010, 463:178-183

Coding sequences of Glyma14g04700

Limit To All Plant Sequences

>Glyma14g04700.1   sequence type=CDS   gene model=Glyma14g04700   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGAACACAAAGTAGCCACAACAACTGAAGGACAACCCATAAGATGTAAAGCGGCGGTTTGTCGCGAAGCTGGTGAGCCACTGAGTATTGAGGAGATCATTGTGGCACCACCAATGCCTGGTGAAGCTCGCATTCGTATTACATGCTCCACTCTCTGTCAAACCGATATCAGTTTTTGGAACATGCAGGTTATCTTAGAGATGACTGATGGGGGAGCAGATTATTGCTTTGAATGTGTTGGTATGGCATCATTGATGCAGGAAGCCTATGTTTCTTGTAGAAAGGGTTGGGGAAAAACAATAGTTTTGGGAGTGGACAAGCCAGGATCCAAGTTAAACCTTAGCTGTAGTGAGGTCCACGTTTGTGGGAAGAGCCTCAGGGGATACTTATTTGGAGGACTCAAACCCAAGTCTGATGTACCCATTCTCCTTAAACGCTACATGGACAAGAATGCTTCTCAGCCTACTAGAAGTCCTTTGAACAATGGCTCCCCGTTGGTGCCACCGATTAATACTTTCTTGCCTGTTAAGGAGATCTTACTTGGATTTTCTCATTTCAATGGAACGACGCTGGTGGATGTAGTAGCATGGTTTCAGATGTCACAGACATTATCTCTAGTGTTTACTTGGTCTGAGTTGACTCGTGCTCTGGAGTCTCAATTCCATCCTTCACCTTTTGATTGTCCAATGGCTGAGCTCTTCAAGCTTCAACAAACAAATGATAATAAGGATCCTATTAGTACAACTGTATCTCAGGGCGTTCAGGAAGATGAGATAGTAGAACCTGAAGATCATCATTTGTCTTTCAGTGCTTTGAAAGGTGGTAGGAGAGTTGGTACTATTAGATTCATAGCTTATATTGAAAAGTTATCCGTGACTGTGTTGATTGTTGGTGACAGTTTTGATAATTTTTTGCAGCCAAGGGTAGCCAAGTTTTTAAAATTACCTGTGGAACCAGCAACTCAAGTTACAGTAATGGTTGACAATGGTTATTATATGTCTATTGAAGGATTGGTTAAGCAATTGAAGATCCAGGCTCAAGGCAATACTTTTCAGTTACCAATATTTTTGCTTCTTATTTCTGGCGCTGATCTCAATCTAGGAGCTATAGTTGGTTGA

Predicted protein sequences of Glyma14g04700

Limit To All Plant Sequences

>Glyma14g04700.1   sequence type=predicted peptide   gene model=Glyma14g04700   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MEHKVATTTEGQPIRCKAAVCREAGEPLSIEEIIVAPPMPGEARIRITCSTLCQTDISFWNMQVILEMTDGGADYCFECVGMASLMQEAYVSCRKGWGKTIVLGVDKPGSKLNLSCSEVHVCGKSLRGYLFGGLKPKSDVPILLKRYMDKNASQPTRSPLNNGSPLVPPINTFLPVKEILLGFSHFNGTTLVDVVAWFQMSQTLSLVFTWSELTRALESQFHPSPFDCPMAELFKLQQTNDNKDPISTTVSQGVQEDEIVEPEDHHLSFSALKGGRRVGTIRFIAYIEKLSVTVLIVGDSFDNFLQPRVAKFLKLPVEPATQVTVMVDNGYYMSIEGLVKQLKIQAQGNTFQLPIFLLLISGADLNLGAIVG*

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