SoyBase
SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research
SoyBase
SoyBase transitions to NEW site on 10/1/2024
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A newer version of this gene model can be found here:
| Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
|---|---|---|---|---|---|
| AT1G11660 | AT | Annotation by Michelle Graham. TAIR10: heat shock protein 70 (Hsp 70) family protein | chr1:3921056-3924347 FORWARD LENGTH=763 | SoyBase | E_val: 0 | ISS |
| GO:0006457 | GO-bp | Annotation by Michelle Graham. GO Biological Process: protein folding | SoyBase | N/A | ISS |
| GO:0005634 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: nucleus | SoyBase | N/A | ISS |
| GO:0005524 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: ATP binding | SoyBase | N/A | ISS |
| KOG0103 | KOG | Molecular chaperones HSP105/HSP110/SSE1, HSP70 superfamily | JGI | ISS | |
| PTHR19375 | Panther | HEAT SHOCK PROTEIN 70KDA | JGI | ISS | |
| PTHR19375:SF14 | Panther | gb def: hsp 70 family protein [schizosaccharomyces pombe] | JGI | ISS | |
| PF00012 | PFAM | Hsp70 protein | JGI | ISS | |
| UniRef100_G7K8I3 | UniRef | Annotation by Michelle Graham. Most informative UniRef hit: 97 kDa heat shock protein n=1 Tax=Medicago truncatula RepID=G7K8I3_MEDTR | SoyBase | E_val: 0 | ISS |
| UniRef100_UPI000233BF8F | UniRef | Annotation by Michelle Graham. Best UniRef hit: UPI000233BF8F related cluster n=1 Tax=unknown RepID=UPI000233BF8F | SoyBase | E_val: 0 | ISS |
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Glyma14g02740 not represented in the dataset |
Glyma14g02740 not represented in the dataset |
| Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
| Corresponding Name | Annotation Version | Evidence | Comments |
|---|---|---|---|
| Glyma.14g024200 | Wm82.a2.v1 | IGC | As supplied by JGI |
| Schmutz et al. 2010 Genome sequence of the palaeopolyploid soybean Nature 2010, 463:178-183 |
>Glyma14g02740.1 sequence type=CDS gene model=Glyma14g02740 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high ATGAGTGGAGTGGGGATTGATATTGGAAATGAGAACTGTGTGATTGCTGCAGTGAAGCAACGTGTGATTGATGTTTTGTTGAATGATGAATCCAAACGTGAAACCCCTGGTGTGGTCTGCTTTGGAGAGAAGCAACGGTTTATAGGGTCAGCTGGTGCTGTTTCTGCTATGATGCACCCCAAGTCCACAATATCTCAAGTGAAGAGACTAATAGGCAGGAGATTTACGGACCCTGATGTTCAGAATGATTTAAAACTGCTCCCAGTTGAAACTTCGGAAGGCCCGGATGGTGGCATTCTGATTCGCTTGAAATACTTGAAGGAGATTCATGCATTTACCCCGGTTCAAATAGTAGCAATGCTCTTTGCTCACTTGAAGACTATAGCTGAAAAGGATTTTGGGACCGCAGTTTCTGACTGCGTTATTGGGGTTCCGTCATACTTTACCAACTTGCAGAGACAAGCATATCTCGATGCAGCAGCAATTGTTGGGTTGAAGCCTTTGCGGTTGATCCATGATTGCACTGCAACTGGTCTTAGTTATGGAGTTTACAAAACAGATATTCCCAATGCAGCTCATATTTATGTTGCATTTGTTGACATAGGTCATTGTGATACTCAGGTCTCTATTGCAGCATTTCAGGCTGGTCAAATGAAGATACTTTCACATGCTTTTGACAGTAGCTTAGGGGGGAGAGACTTTGATGAGGTTCTGTTTAGTCATTTTGCAGCAAGATTTAAGGAACAGTATAGCATTGACGTGTATTCTAATGGCAGGGCATGTAGGAGGCTGCGTGTAGCATGTGAGAAGTTGAAGAAGGTTTTGAGTGCAAATGCAGTGGCTGATCTGAGCATTGAGTGTTTGATGGATGAAAAAGATGTTAAGGGCTTTATCAAGAGGGAAGAATTTGAGAATTTGGCATCAGGATTACTGGAGAAATTTAATATTCCCTGCAACAAAGCATTGGCTGATGCCGGCATGACTGTAGAAAAGATTAATTCTGTTGAGTTAGTTGGTTCAGGTTCACGGATTCCAGCTATAACTAATTTATTAACTTCTCTATTTAAGAGAGAACTCAGCCGCACGCTGAATGCAAGTGAGTGTGTAGCACGTGGTTGTGCTCTCCAGTGTGCAATGCTCAGTCCTATTTTCCGTGTCAAAGAATATGAGGTCCAGGATTCTATTCCTTTTTCCATTGGACTTTCATGTGATGGAAGTCCAATTTGTGAAGGATCGGATGGTGTACTCTTCCCAAAAGGCCAACCCATTCCAAGTGTTAAAATTCTAACATTTCAGTGCAGTAATTTGCTCCATCTGGAAGCATTCTATGCTAATCCAGATGAATTACCACCTGGGACATCTCCTAAAATAAGTTGCTTCACAATTGATCCTTTCCATGGATCCCATGGAAGTAAGGCAAGAATTAAAGTTCGAGTTCAACTAAATTTGCATGGCATTATCAGTATTGAATCAGCTACATTGATGGAGGATCATGTGGATGATTCAGTTACAACAGGTGATTATCATTCAAATTCTGAAGCAATGAATGTTGAACCTGTTTCTGAGACAGTTGAAAATGTCACAGAAGATAGTATCAACAAAAAGTGTGAAGCTCCACGCCATTTGGCTGATGGTACAAAAAAAGATAAAGCTAACAGAAGGCTTCATGTACCTGTGAGTGAAAACATTTATGGTGGAATGACCAAGGCTGAGATATTGGAAGCTCAAGAAAAAGAACTCCAGTTAGCTGATCAGGACAGAACAATTGAGCTGACCAAAGACAGGAAGAATTCGTTGGAGTCTTATATTTACGAAACGAGGAGTAAGCTATTCAGCACATATCTAAGCTTTTCAAGCGAACATGAGAGGAAGGACATATCTAGGAGCCTGAAAGCGACTGAGGATTGGCTTTATGATGATGGTGATGACGAAACTGTAGATGCTTATTCTGCAAAACTAGAAGATCTAAAACAGCTGGTGGATCCAATTGAGTTTCGGTATAAAGACACAGAAGCAAGACCACAAGCTACAAGAGATTTGTTAAGTTGCATTGTAGAGTATCGAATGTCTGCAGATTCTCTTCCACCCCAAGATAAAGAACAGATCATCAATGAGTGCAATAAAGCAGAGCAGTGGCTAAGAGAGATGAGGCAACAGCAAGATCTTTACCCTAAGAACTTTGATCCAGTATTATTGTCAAGTGATATCAAGAGCAAGACAGAAGATTTAAACTCAGTATGCCAACAGATATTGAAATCCAAGGGTTCTCCATTTCCAAAAGACAAGGGCGAAGACAAGCAGAATACTTCTAATCATCAATGA
>Glyma14g02740.1 sequence type=predicted peptide gene model=Glyma14g02740 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high MSGVGIDIGNENCVIAAVKQRVIDVLLNDESKRETPGVVCFGEKQRFIGSAGAVSAMMHPKSTISQVKRLIGRRFTDPDVQNDLKLLPVETSEGPDGGILIRLKYLKEIHAFTPVQIVAMLFAHLKTIAEKDFGTAVSDCVIGVPSYFTNLQRQAYLDAAAIVGLKPLRLIHDCTATGLSYGVYKTDIPNAAHIYVAFVDIGHCDTQVSIAAFQAGQMKILSHAFDSSLGGRDFDEVLFSHFAARFKEQYSIDVYSNGRACRRLRVACEKLKKVLSANAVADLSIECLMDEKDVKGFIKREEFENLASGLLEKFNIPCNKALADAGMTVEKINSVELVGSGSRIPAITNLLTSLFKRELSRTLNASECVARGCALQCAMLSPIFRVKEYEVQDSIPFSIGLSCDGSPICEGSDGVLFPKGQPIPSVKILTFQCSNLLHLEAFYANPDELPPGTSPKISCFTIDPFHGSHGSKARIKVRVQLNLHGIISIESATLMEDHVDDSVTTGDYHSNSEAMNVEPVSETVENVTEDSINKKCEAPRHLADGTKKDKANRRLHVPVSENIYGGMTKAEILEAQEKELQLADQDRTIELTKDRKNSLESYIYETRSKLFSTYLSFSSEHERKDISRSLKATEDWLYDDGDDETVDAYSAKLEDLKQLVDPIEFRYKDTEARPQATRDLLSCIVEYRMSADSLPPQDKEQIINECNKAEQWLREMRQQQDLYPKNFDPVLLSSDIKSKTEDLNSVCQQILKSKGSPFPKDKGEDKQNTSNHQ*
| Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA | ||
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