Glyma14g01730 - SoyBase

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Report for Sequence Feature Glyma14g01730

Feature Type:	gene_model
Chromosome:	Gm14
Start:	999532
stop:	1004650
Source:	JGI
Version:	Wm82.a1.v1.1
High confidence:	yes

A newer version of this gene model can be found here:

Annotations for Glyma14g01730

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT5G55810	AT	Annotation by Michelle Graham. TAIR10: nicotinate/nicotinamide mononucleotide adenyltransferase \| chr5:22584229-22586239 REVERSE LENGTH=238	SoyBase	E_val: 5.00E-118	ISS
GO:0009058	GO-bp	Annotation by Michelle Graham. GO Biological Process: biosynthetic process	SoyBase	N/A	ISS
GO:0009435	GO-bp	Annotation by Michelle Graham. GO Biological Process: NAD biosynthetic process	SoyBase	N/A	ISS
GO:0009555	GO-bp	Annotation by Michelle Graham. GO Biological Process: pollen development	SoyBase	N/A	ISS
GO:0009860	GO-bp	Annotation by Michelle Graham. GO Biological Process: pollen tube growth	SoyBase	N/A	ISS
GO:0005634	GO-cc	Annotation by Michelle Graham. GO Cellular Compartment: nucleus	SoyBase	N/A	ISS
GO:0000309	GO-mf	Annotation by Michelle Graham. GO Molecular Function: nicotinamide-nucleotide adenylyltransferase activity	SoyBase	N/A	ISS
GO:0004515	GO-mf	Annotation by Michelle Graham. GO Molecular Function: nicotinate-nucleotide adenylyltransferase activity	SoyBase	N/A	ISS
GO:0016779	GO-mf	Annotation by Michelle Graham. GO Molecular Function: nucleotidyltransferase activity	SoyBase	N/A	ISS
KOG3199	KOG	Nicotinamide mononucleotide adenylyl transferase	JGI		ISS
PTHR12039	Panther	NICOTINAMIDE MONONUCLEOTIDE ADENYLYLTRANSFERASE	JGI		ISS
PF01467	PFAM	Cytidylyltransferase	JGI		ISS
UniRef100_G7KEH1	UniRef	Annotation by Michelle Graham. Most informative UniRef hit: Nicotinamide mononucleotide adenylyltransferase n=1 Tax=Medicago truncatula RepID=G7KEH1_MEDTR	SoyBase	E_val: 5.00E-156	ISS
UniRef100_I1M6G0	UniRef	Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=2 Tax=Glycine max RepID=I1M6G0_SOYBN	SoyBase	E_val: 0	ISS

Expression Patterns of Glyma14g01730

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma14g01730 not represented in the dataset	Glyma14g01730 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Paralogs of Glyma14g01730

Paralog	Evidence	Comments
Glyma02g47011	IGC	Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.3.

Gene model name correspondences to Glyma14g01730 Gene Call Version Wm82.a1.v1.1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma.14g013400	Wm82.a2.v1	IGC	As supplied by JGI

References for Glyma14g01730

Schmutz et al. 2010
Genome sequence of the palaeopolyploid soybean
Nature 2010, 463:178-183

Transcripts of Glyma14g01730

Limit To All Plant Sequences

>Glyma14g01730.2   sequence type=transcript   gene model=Glyma14g01730   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
GTAGTAAGTATTCCTTTCATTTCATTCATCGTCTTATTGGGCACGCCCCCATCCTCGGCTTCTCCTTCCTGGAGCACTCTCACTCCGTCACCCAACACATCCAGGTCATGGATGTTCCACTGCCACGGGATAAATTGGCTTTAGATTTGATTAATAATGAGCCCTCCCCTGCAAACACGAGCAACAAGATATATGTAATTCTGGTGGCAACTGGAAGCTTTAATCCACCTACTTTCATGCATTTACGCATGTTTGAGCTTGCAAGAGATGCATTGAATTCAGATGGCTACTGCGTAATTGGAGGTTACTTGTCTCCTGTGAATGATGCATACAAGAAAAAGGGCCTAATATCTGCTGAACATCGAATACAATTATGTCATTTAGCCTGCAAAAGTTCAGATTTTATAATGGTTGATCCATGGGAGGCAAGTCAGAGCACATATCAACGCACTTTAACTGTTCTCTCCAGAGTCCACAATTCAGTTTGTGAGACAGGGTTGGTATCTCAAGAATCCCTCAAGGTCATGCTTCTTTGTGGTTCTGATCTCCTTCATTCTTTTAGCATTCCTGGATTCTGGATTCCTGACCAGGTTAAAACTATATGCAAAGATTATGGAGTAGTCTGCATTCCCAGGGAAGGACAAGATGTTGAGAAGACTATATTTAAAGATGACATTCTGAATGAGAATAAGGATAATATCAAAGTTGTGAATGAACTTGTTCCAAATCAAATCAGCTCAACCAGAGTAAGGGATTGCATTGCAAGAGGACTATCTATAAAATACCTTACCGCGGATGAAGTGATTGATTATATCAGAGAGCAACAATTATACTTGAACTAATGATAAATGATTACTACTGTTTTTCATTACATTCTGTAGACATGAGTCTTTGCAAGAACCACTGCGCATCGCTATCCGAGCCAATTTTCTATAAACAGATGATTTTTCATTTTTGTGTTGTAAATTTGCAGATAAATAAATATTACATAATTTATGTAATCGAATTGCAAATACTACTGTTGAAATTGCAACCTAGTGCTTTTAAGACTTTGGGTTAGATGTAGTATATTAAGTTTATTTGTAAAGGGTTGATGGGGATCTCTGCAATTTGTTTGTGTAAAAAAAATAAAAATTGAGCCGGGGATATTCTTGATTGGAGCCCTGATATATTGAAATTTATTCAAGT

>Glyma14g01730.3   sequence type=transcript   gene model=Glyma14g01730   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
AAGAGACCCTTTCAATGTTGGGTGAAGTATTGTATGGGCATGGAATATTGGAATTTGATGTGTTCGTGTTTAATGAACTTTCTCCCATCATTGTATGTGTAGTAAGTATTCCTTTCATTTCATTCATCGTCTTATTGGGCACGCCCCCATCCTCGGCTTCTCCTTCCTGGAGCACTCTCACTCCGTCACCCAACACATCCAGGTCATGGATGTTCCACTGCCACGGGATAAATTGGCTTTAGATTTGATTAATAATGAGCCCTCCCCTGCAAACACGAGCAACAGCAAGATATATGTAATTCTGGTGGCAACTGGAAGCTTTAATCCACCTACTTTCATGCATTTACGCATGTTTGAGCTTGCAAGAGATGCATTGAATTCAGATGGCTACTGCGTAATTGGAGGTTACTTGTCTCCTGTGAATGATGCATACAAGAAAAAGGGCCTAATATCTGCTGAACATCGAATACAATTATGTCATTTAGCCTGCAAAAGTTCAGATTTTATAATGGTTGATCCATGGGAGGCAAGTCAGAGCACATATCAACGCACTTTAACTGTTCTCTCCAGAGTCCACAATTCAGTTTGTGAGACAGGGTTGGTATCTCAAGAATCCCTCAAGGTCATGCTTCTTTGTGGTTCTGATCTCCTTCATTCTTTTAGCATTCCTGGATTCTGGATTCCTGACCAGGTTAAAACTATATGCAAAGATTATGGAGTAGTCTGCATTCCCAGGGAAGGACAAGATGTTGAGAAGACTATATTTAAAGATGACATTCTGAATGAGAATAAGGATAATATCAAAGTTGTGAATGAACTTGTTCCAAATCAAATCAGCTCAACCAGAGTAAGGGATTGCATTGCAAGAGGACTATCTATAAAATACCTTACCGCGGATGAAGTGATTGATTATATCAGAGAGCAACAATTATACTTGAACTAATGATAAATGATTACTACTGTTTTTCATTACATTCTGTAGACATGAGTCTTTGCAAGAACCACTGCGCATCGCTATCCGAGCCAATTTTCTATAAACAGATGATTTTTCATTTTTGTGTTGTAAATTTGCAGATAAATAAATATTACATAATTTATGTAATCGAATTGCAAATACTACTGTTGAAATTGCAACCTAGTGCTTTTAAGACTTTGGGTTAGATGTAGTATATTAAGTTTATTTGTAAAGGGTTGATGGGGATCTCTGCAATTTGTTTGTGTAAAAAAAATAAAAATTGAGCCGGGGATATTCTTGATTGGAGCCCTGATATATTGAAATTTATTCAAGT

Coding sequences of Glyma14g01730

Limit To All Plant Sequences

>Glyma14g01730.1   sequence type=CDS   gene model=Glyma14g01730   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGATGTTCCACTGCCACGGGATAAATTGGCTTTAGATTTGATTAATAATGAGCCCTCCCCTGCAAACACGAGCAACAGCAAGATATATGTAATTCTGGTGGCAACTGGAAGCTTTAATCCACCTACTTTCATGCATTTACGCATGTTTGAGCTTGCAAGAGATGCATTGAATTCAGATGGCTACTGCGTAATTGGAGGTTACTTGTCTCCTGTGAATGATGCATACAAGAAAAAGGGCCTAATATCTGCTGAACATCGAATACAATTATGTCATTTAGCCTGCAAAAGTTCAGATTTTATAATGGTTGATCCATGGGAGGCAAGTCAGAGCACATATCAACGCACTTTAACTGTTCTCTCCAGAGTCCACAATTCAGTTTGTGAGACAGGGTTGGTATCTCAAGAATCCCTCAAGGTCATGCTTCTTTGTGGTTCTGATCTCCTTCATTCTTTTAGCATTCCTGGATTCTGGATTCCTGACCAGGTTAAAACTATATGCAAAGATTATGGAGTAGTCTGCATTCCCAGGGAAGGACAAGATGTTGAGAAGACTATATTTAAAGATGACATTCTGAATGAGAATAAGGATAATATCAAAGTTGTGAATGAACTTGTTCCAAATCAAATCAGCTCAACCAGAGTAAGGGATTGCATTGCAAGAGGACTATCTATAAAATACCTTACCGCGGATGAAGTGATTGATTATATCAGAGAGCAACAATTATACTTGAACTAA

>Glyma14g01730.2   sequence type=CDS   gene model=Glyma14g01730   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGATGTTCCACTGCCACGGGATAAATTGGCTTTAGATTTGATTAATAATGAGCCCTCCCCTGCAAACACGAGCAACAAGATATATGTAATTCTGGTGGCAACTGGAAGCTTTAATCCACCTACTTTCATGCATTTACGCATGTTTGAGCTTGCAAGAGATGCATTGAATTCAGATGGCTACTGCGTAATTGGAGGTTACTTGTCTCCTGTGAATGATGCATACAAGAAAAAGGGCCTAATATCTGCTGAACATCGAATACAATTATGTCATTTAGCCTGCAAAAGTTCAGATTTTATAATGGTTGATCCATGGGAGGCAAGTCAGAGCACATATCAACGCACTTTAACTGTTCTCTCCAGAGTCCACAATTCAGTTTGTGAGACAGGGTTGGTATCTCAAGAATCCCTCAAGGTCATGCTTCTTTGTGGTTCTGATCTCCTTCATTCTTTTAGCATTCCTGGATTCTGGATTCCTGACCAGGTTAAAACTATATGCAAAGATTATGGAGTAGTCTGCATTCCCAGGGAAGGACAAGATGTTGAGAAGACTATATTTAAAGATGACATTCTGAATGAGAATAAGGATAATATCAAAGTTGTGAATGAACTTGTTCCAAATCAAATCAGCTCAACCAGAGTAAGGGATTGCATTGCAAGAGGACTATCTATAAAATACCTTACCGCGGATGAAGTGATTGATTATATCAGAGAGCAACAATTATACTTGAACTAA

>Glyma14g01730.3   sequence type=CDS   gene model=Glyma14g01730   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGTGTAGTAAGTATTCCTTTCATTTCATTCATCGTCTTATTGGGCACGCCCCCATCCTCGGCTTCTCCTTCCTGGAGCACTCTCACTCCGTCACCCAACACATCCAGGTCATGGATGTTCCACTGCCACGGGATAAATTGGCTTTAGATTTGATTAATAATGAGCCCTCCCCTGCAAACACGAGCAACAGCAAGATATATGTAATTCTGGTGGCAACTGGAAGCTTTAATCCACCTACTTTCATGCATTTACGCATGTTTGAGCTTGCAAGAGATGCATTGAATTCAGATGGCTACTGCGTAATTGGAGGTTACTTGTCTCCTGTGAATGATGCATACAAGAAAAAGGGCCTAATATCTGCTGAACATCGAATACAATTATGTCATTTAGCCTGCAAAAGTTCAGATTTTATAATGGTTGATCCATGGGAGGCAAGTCAGAGCACATATCAACGCACTTTAACTGTTCTCTCCAGAGTCCACAATTCAGTTTGTGAGACAGGGTTGGTATCTCAAGAATCCCTCAAGGTCATGCTTCTTTGTGGTTCTGATCTCCTTCATTCTTTTAGCATTCCTGGATTCTGGATTCCTGACCAGGTTAAAACTATATGCAAAGATTATGGAGTAGTCTGCATTCCCAGGGAAGGACAAGATGTTGAGAAGACTATATTTAAAGATGACATTCTGAATGAGAATAAGGATAATATCAAAGTTGTGAATGAACTTGTTCCAAATCAAATCAGCTCAACCAGAGTAAGGGATTGCATTGCAAGAGGACTATCTATAAAATACCTTACCGCGGATGAAGTGATTGATTATATCAGAGAGCAACAATTATACTTGAACTAA

Predicted protein sequences of Glyma14g01730

Limit To All Plant Sequences

>Glyma14g01730.1   sequence type=predicted peptide   gene model=Glyma14g01730   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MDVPLPRDKLALDLINNEPSPANTSNSKIYVILVATGSFNPPTFMHLRMFELARDALNSDGYCVIGGYLSPVNDAYKKKGLISAEHRIQLCHLACKSSDFIMVDPWEASQSTYQRTLTVLSRVHNSVCETGLVSQESLKVMLLCGSDLLHSFSIPGFWIPDQVKTICKDYGVVCIPREGQDVEKTIFKDDILNENKDNIKVVNELVPNQISSTRVRDCIARGLSIKYLTADEVIDYIREQQLYLN*

>Glyma14g01730.2   sequence type=predicted peptide   gene model=Glyma14g01730   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MDVPLPRDKLALDLINNEPSPANTSNKIYVILVATGSFNPPTFMHLRMFELARDALNSDGYCVIGGYLSPVNDAYKKKGLISAEHRIQLCHLACKSSDFIMVDPWEASQSTYQRTLTVLSRVHNSVCETGLVSQESLKVMLLCGSDLLHSFSIPGFWIPDQVKTICKDYGVVCIPREGQDVEKTIFKDDILNENKDNIKVVNELVPNQISSTRVRDCIARGLSIKYLTADEVIDYIREQQLYLN*

>Glyma14g01730.3   sequence type=predicted peptide   gene model=Glyma14g01730   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MCSKYSFHFIHRLIGHAPILGFSFLEHSHSVTQHIQVMDVPLPRDKLALDLINNEPSPANTSNSKIYVILVATGSFNPPTFMHLRMFELARDALNSDGYCVIGGYLSPVNDAYKKKGLISAEHRIQLCHLACKSSDFIMVDPWEASQSTYQRTLTVLSRVHNSVCETGLVSQESLKVMLLCGSDLLHSFSIPGFWIPDQVKTICKDYGVVCIPREGQDVEKTIFKDDILNENKDNIKVVNELVPNQISSTRVRDCIARGLSIKYLTADEVIDYIREQQLYLN*

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