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Report for Sequence Feature Glyma13g41910

Feature Type:gene_model
Chromosome:Gm13
Start:42080685
stop:42081441
Source:JGI
Version:Wm82.a1.v1.1
High confidence:yes



A newer version of this gene model can be found here:

Annotations for Glyma13g41910
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT2G43310AT Annotation by Michelle Graham. TAIR10: Ribosomal L18p/L5e family protein | chr2:17996106-17996507 FORWARD LENGTH=133 SoyBaseE_val: 3.00E-48ISS
GO:0008150GO-bp Annotation by Michelle Graham. GO Biological Process: biological process SoyBaseN/AISS
GO:0005739GO-cc Annotation by Michelle Graham. GO Cellular Compartment: mitochondrion SoyBaseN/AISS
GO:0003674GO-mf Annotation by Michelle Graham. GO Molecular Function: molecular function SoyBaseN/AISS
UniRef100_I1M555UniRef Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1M555_SOYBN SoyBaseE_val: 4.00E-86ISS
UniRef100_O22846UniRef Annotation by Michelle Graham. Most informative UniRef hit: F14B2.25/F14B2.25 n=1 Tax=Arabidopsis thaliana RepID=O22846_ARATH SoyBaseE_val: 1.00E-45ISS

Expression Patterns of Glyma13g41910
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma13g41910 not represented in the dataset
Glyma13g41910 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma13g41910 Gene Call Version Wm82.a1.v1.1
Corresponding NameAnnotation VersionEvidenceComments
Glyma.13g344000 Wm82.a2.v1IGC As supplied by JGI

References for Glyma13g41910
Schmutz et al. 2010
  Genome sequence of the palaeopolyploid soybean
  Nature 2010, 463:178-183

Coding sequences of Glyma13g41910
>Glyma13g41910.1   sequence type=CDS   gene model=Glyma13g41910   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGCCGGTACCTACCATAACCACCAGCGGCACGTGCTACAGCTGGTGATGTCGTGCCGGAAAATCACCGCCCAGGTCACAAACACCACCACATCCTCCATCATAGCCATGGCTTCATCATCGGAGCAGGAATTCGTGGCTCACTACCGCGCTCAGCTTAATCGCTTCCCCAGATCGCACCGCTTCTGGGACGCTAAAGTGGCCTCTCGCGTCGGGGAGAAGCTAGGGTTCCGCCTCAGAGAAATCGGCGTCACCACCGTCCAAATCGACCCTCGCGAGGAACAGTCCCGTCCCGTCCATTACCGCGTCATGCTCTCCCCCTTGTTCCATTCCATAAAAAACGCCGGCATCCACGTTTCCGGCGTTGACTAA
Predicted protein sequences of Glyma13g41910
>Glyma13g41910.1   sequence type=predicted peptide   gene model=Glyma13g41910   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MAGTYHNHQRHVLQLVMSCRKITAQVTNTTTSSIIAMASSSEQEFVAHYRAQLNRFPRSHRFWDAKVASRVGEKLGFRLREIGVTTVQIDPREEQSRPVHYRVMLSPLFHSIKNAGIHVSGVD*






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