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Report for Sequence Feature Glyma13g38010

Feature Type:gene_model
Chromosome:Gm13
Start:38941957
stop:38943365
Source:JGI
Version:Wm82.a1.v1.1
High confidence:yes



A newer version of this gene model can be found here:

Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G06920AT Annotation by Michelle Graham. TAIR10: FASCICLIN-like arabinogalactan protein 21 precursor | chr5:2142858-2143919 FORWARD LENGTH=353 SoyBaseE_val: 5.00E-67ISS
GO:0006863GO-bp Annotation by Michelle Graham. GO Biological Process: purine nucleobase transport SoyBaseN/AISS
GO:0005576GO-cc Annotation by Michelle Graham. GO Cellular Compartment: extracellular region SoyBaseN/AISS
GO:0003674GO-mf Annotation by Michelle Graham. GO Molecular Function: molecular function SoyBaseN/AISS
UniRef100_G7IRK3UniRef Annotation by Michelle Graham. Most informative UniRef hit: Fasciclin-like arabinogalactan protein n=1 Tax=Medicago truncatula RepID=G7IRK3_MEDTR SoyBaseE_val: 3.00E-149ISS
UniRef100_I1M400UniRef Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=2 Tax=Glycine max RepID=I1M400_SOYBN SoyBaseE_val: 0ISS

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma13g38010 not represented in the dataset

Glyma13g38010 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection
Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Corresponding NameAnnotation VersionEvidenceComments
Glyma.13g304100 Wm82.a2.v1IGC As supplied by JGI

Schmutz et al. 2010
  Genome sequence of the palaeopolyploid soybean
  Nature 2010, 463:178-183

>Glyma13g38010.2   sequence type=CDS   gene model=Glyma13g38010   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGCGTCTCTACCGTTATTCCCAAAGACAGAGACATTCTCCCTCCAAAAGAATCACATTCTTTGTTTTCTTCTTCTTGGCCATGGCTTATTCCCGTTGGTGCTGGTTCCCACTCTACTTAGCAGCCTCAATTGCCCTCGGAATCATCGCCATCTCCTCAGCGATACGTTCCACTTCCAACAAGAACCCACCCCAAGATCCACCCATACCCCACGACATCTCACTCAACGCCTCCAACGCTCTCCGCAAAGCAGGCTTCATAGTAATGGCAGATCTTCTCCACCACTCTCCCTCATTCTTCAAACCGCCGCAAAACTCAACCATCTTCGCCATCAAAGACTCCGCCATCAAAAACACCTCCCACCCTCTCTGGTTCCTCAAAACCCTCCTCCTCTACCACACCACCACCTCCAACGCCTATTCCTTCAACGACCTCGTCAAAATTCCCCAAGGAACGTGCCTCCCCACCCTCCTTCGTGATAAAAATGTTTCTCTCACTAAGCTTGACCTTGACCATGCACCAAACTCCGTGGAGATTAATCACGTCTTGATATCAAACCCTAATATCTTCCTCGGAGAGCAACTTGCCGTGCATGGCGTTCTTGCGCCGTTCTCTCCCCTTCAGCCGCAAGACCTTCTTCAACGGGGTTTTGGTTTTGCTATTCGCACACCCACTTGCCGCTCCAACGACGTCAACGTCTCCGTTTCCAAGAACGGGGTTGAGTGGAACCGCGTCGTTCACTTGCTCCGTGCAAAAGGGTATGCTTCGTTCTCGATTGCGTTGCATTCTGTTCTTGATGGGATAAAGAGAGACTTTTCTGGGAGTTTGGGTTATGTCACAATCTTCGCTCCTCGCGATTTGACTTTACTTGGATACCCTTTGACTATTCTTGATAGAGCTGTGAGGCTTCATATTCTGCCTCAAAGGTTTGTTTACAAAGAAATCTCTTCTCTGCCGGTTAGGAGTTTGTTAAAGACGCTCATGCCTGATGAGCATCTTGAGATTGATGGGGTTCTGGATTTTGTGCCGGGCATGGTTGTTAATGGTGTTGTGATTGTGGCGCCTGACATGATCATTTCGGAGAAATTTGTGGTTCATGGGATTTCTAGAGCTTTTAAGATGGCTGAGGTTACTAGTTGA

>Glyma13g38010.2   sequence type=predicted peptide   gene model=Glyma13g38010   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MRLYRYSQRQRHSPSKRITFFVFFFLAMAYSRWCWFPLYLAASIALGIIAISSAIRSTSNKNPPQDPPIPHDISLNASNALRKAGFIVMADLLHHSPSFFKPPQNSTIFAIKDSAIKNTSHPLWFLKTLLLYHTTTSNAYSFNDLVKIPQGTCLPTLLRDKNVSLTKLDLDHAPNSVEINHVLISNPNIFLGEQLAVHGVLAPFSPLQPQDLLQRGFGFAIRTPTCRSNDVNVSVSKNGVEWNRVVHLLRAKGYASFSIALHSVLDGIKRDFSGSLGYVTIFAPRDLTLLGYPLTILDRAVRLHILPQRFVYKEISSLPVRSLLKTLMPDEHLEIDGVLDFVPGMVVNGVVIVAPDMIISEKFVVHGISRAFKMAEVTS*







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