|
A newer version of this gene model can be found here:
Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
---|---|---|---|---|---|
AT2G31180 | AT | Annotation by Michelle Graham. TAIR10: myb domain protein 14 | chr2:13286806-13288175 REVERSE LENGTH=249 | SoyBase | E_val: 1.00E-63 | ISS |
GO:0006355 | GO-bp | Annotation by Michelle Graham. GO Biological Process: regulation of transcription, DNA-dependent | SoyBase | N/A | ISS |
GO:0009651 | GO-bp | Annotation by Michelle Graham. GO Biological Process: response to salt stress | SoyBase | N/A | ISS |
GO:0009723 | GO-bp | Annotation by Michelle Graham. GO Biological Process: response to ethylene stimulus | SoyBase | N/A | ISS |
GO:0009733 | GO-bp | Annotation by Michelle Graham. GO Biological Process: response to auxin stimulus | SoyBase | N/A | ISS |
GO:0009751 | GO-bp | Annotation by Michelle Graham. GO Biological Process: response to salicylic acid stimulus | SoyBase | N/A | ISS |
GO:0009753 | GO-bp | Annotation by Michelle Graham. GO Biological Process: response to jasmonic acid stimulus | SoyBase | N/A | ISS |
GO:0005634 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: nucleus | SoyBase | N/A | ISS |
GO:0003677 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: DNA binding | SoyBase | N/A | ISS |
GO:0003700 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: sequence-specific DNA binding transcription factor activity | SoyBase | N/A | ISS |
PTHR10641 | Panther | MYB-RELATED | JGI | ISS | |
PF00249 | PFAM | Myb-like DNA-binding domain | JGI | ISS | |
UniRef100_G7IRM3 | UniRef | Annotation by Michelle Graham. Most informative UniRef hit: MYB transcription factor n=1 Tax=Medicago truncatula RepID=G7IRM3_MEDTR | SoyBase | E_val: 4.00E-80 | ISS |
UniRef100_UPI000233BEFD | UniRef | Annotation by Michelle Graham. Best UniRef hit: UPI000233BEFD related cluster n=1 Tax=unknown RepID=UPI000233BEFD | SoyBase | E_val: 3.00E-168 | ISS |
Glyma13g37903 not represented in the dataset |
Glyma13g37903 not represented in the dataset |
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
Corresponding Name | Annotation Version | Evidence | Comments |
---|---|---|---|
Glyma.13g303200 | Wm82.a2.v1 | IGC | As supplied by JGI |
Schmutz et al. 2010 Genome sequence of the palaeopolyploid soybean Nature 2010, 463:178-183 |
>Glyma13g37903.1 sequence type=CDS gene model=Glyma13g37903 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high ATGGTGAGAACCCCTTGTTGCGACAAAAATGGACTGAAGAAAGGCCCGTGGACACCAGAGGAAGATAGGAAGTTGATCGATTATGTCACTAAGTATGGACACTGGAATTGGCGCTTACTCCCCAAGTTTGCAGGTCTTGCAAGATGTGGGAAGAGTTGCAGGCTGAGATGGCTGAACTATCTAAGGCCAGATGTTAAAAGAGGGAACTTTAGTCATGAAGAAGAAGAAACCATTGTCAGACTTCACGAAAAGTTGGGTAATAGATGGTCAGCAATTGCTGCTGAATTGCCAGGGAGGACGGATAATGAAATAAAGAACCACTGGCACACCGCCCTTAAGAAGCGTTTTGAACGAAAGCCAAAAGCTAAACGCAGAACTGAAAAAGAAGGCAATGTTGTTTCTAAGTCAATGGAGAGAGTGGTGTTAGAGAACTGCAGTGAGTACGCTGTGATAACAACAGATGCTGCTGCAGCCATCACAAACCATGAAAATTCGGTTCTAGAAGGTGATGATTATGGCCTTTCCTTTTTGGACACATACACGGAGCCTGATGTGTGTGCAAATTTCTGGACAGAGCCTTATTTAATTGACAATTCCTATGTCCCTCCTGAGGGTGATGTAGTAGAACTTTGGAGCCACAATGATTTGTACATGCACGAATATTGCGAGGGTTTCTTCTGCTGA
>Glyma13g37903.1 sequence type=predicted peptide gene model=Glyma13g37903 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high MVRTPCCDKNGLKKGPWTPEEDRKLIDYVTKYGHWNWRLLPKFAGLARCGKSCRLRWLNYLRPDVKRGNFSHEEEETIVRLHEKLGNRWSAIAAELPGRTDNEIKNHWHTALKKRFERKPKAKRRTEKEGNVVSKSMERVVLENCSEYAVITTDAAAAITNHENSVLEGDDYGLSFLDTYTEPDVCANFWTEPYLIDNSYVPPEGDVVELWSHNDLYMHEYCEGFFC*
Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA | ||