|
A newer version of this gene model can be found here:
Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
---|---|---|---|---|---|
AT1G75840 | AT | Annotation by Michelle Graham. TAIR10: RAC-like GTP binding protein 5 | chr1:28475964-28477377 FORWARD LENGTH=196 | SoyBase | E_val: 1.00E-116 | ISS |
GO:0000271 | GO-bp | Annotation by Michelle Graham. GO Biological Process: polysaccharide biosynthetic process | SoyBase | N/A | ISS |
GO:0007015 | GO-bp | Annotation by Michelle Graham. GO Biological Process: actin filament organization | SoyBase | N/A | ISS |
GO:0007264 | GO-bp | Annotation by Michelle Graham. GO Biological Process: small GTPase mediated signal transduction | SoyBase | N/A | ISS |
GO:0009825 | GO-bp | Annotation by Michelle Graham. GO Biological Process: multidimensional cell growth | SoyBase | N/A | ISS |
GO:0009932 | GO-bp | Annotation by Michelle Graham. GO Biological Process: cell tip growth | SoyBase | N/A | ISS |
GO:0010817 | GO-bp | Annotation by Michelle Graham. GO Biological Process: regulation of hormone levels | SoyBase | N/A | ISS |
GO:0040007 | GO-bp | Annotation by Michelle Graham. GO Biological Process: growth | SoyBase | N/A | ISS |
GO:0043481 | GO-bp | Annotation by Michelle Graham. GO Biological Process: anthocyanin accumulation in tissues in response to UV light | SoyBase | N/A | ISS |
GO:0048767 | GO-bp | Annotation by Michelle Graham. GO Biological Process: root hair elongation | SoyBase | N/A | ISS |
GO:0071555 | GO-bp | Annotation by Michelle Graham. GO Biological Process: cell wall organization | SoyBase | N/A | ISS |
GO:0005622 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: intracellular | SoyBase | N/A | ISS |
GO:0005634 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: nucleus | SoyBase | N/A | ISS |
GO:0005730 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: nucleolus | SoyBase | N/A | ISS |
GO:0005737 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: cytoplasm | SoyBase | N/A | ISS |
GO:0005886 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: plasma membrane | SoyBase | N/A | ISS |
GO:0009524 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: phragmoplast | SoyBase | N/A | ISS |
GO:0003924 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: GTPase activity | SoyBase | N/A | ISS |
GO:0005515 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: protein binding | SoyBase | N/A | ISS |
GO:0005525 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: GTP binding | SoyBase | N/A | ISS |
GO:0019901 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: protein kinase binding | SoyBase | N/A | ISS |
KOG0393 | KOG | Ras-related small GTPase, Rho type | JGI | ISS | |
PTHR24072 | Panther | FAMILY NOT NAMED | JGI | ISS | |
PTHR24072:SF353 | Panther | JGI | ISS | ||
PF00071 | PFAM | Ras family | JGI | ISS | |
UniRef100_Q40220 | UniRef | Annotation by Michelle Graham. Most informative UniRef hit: Rac-like GTP-binding protein RAC2 n=1 Tax=Lotus japonicus RepID=RAC2_LOTJA | SoyBase | E_val: 3.00E-125 | ISS |
UniRef100_UPI00019A9E8A | UniRef | Annotation by Michelle Graham. Best UniRef hit: UPI00019A9E8A related cluster n=1 Tax=unknown RepID=UPI00019A9E8A | SoyBase | E_val: 3.00E-133 | ISS |
Glyma13g36900 not represented in the dataset |
Glyma13g36900 not represented in the dataset |
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
Corresponding Name | Annotation Version | Evidence | Comments |
---|---|---|---|
Glyma.13g293100 | Wm82.a2.v1 | IGC | As supplied by JGI |
Schmutz et al. 2010 Genome sequence of the palaeopolyploid soybean Nature 2010, 463:178-183 |
>Glyma13g36900.2 sequence type=transcript gene model=Glyma13g36900 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high ATACTTAACCAACTAACACCACTACAGCACCAAACGACTCCTTTGTTGCTCTGGCCTTCCCCTTAAAGAAACAGAAAGCCAAATGCAATAATGTTCAAGGTAAAAGAGGCACACTAAAGTTGGTGCTGAGGGACTTGGCTTATTAAATGCTGATCATCCCCTCCATTTCTTTTCAAAATCAAATTGACCCTTCTGGCCTTCTCTTCCTCCTTCTTTCTAAGCATCATACTTCTTCTCTCCATTGTTTCATTTTTATTTCCAATTCTTCAAGTGAAAGGAATATAGGAACTTGAAGTGATGAAAACAACAGAATGTTAAAGGAAGCTTTGATGTGAGGTGAGGTGAGGAAATCACAAGAGGAATTTGAAAATGAGTACAGCAAGATTCATCAAGTGTGTTACTGTGGGAGATGGAGCCGTGGGAAAGACATGTATGCTCATCTCTTACACCAGCAACACATTCCCCACGGACTATGTGCCTACAGTTTTTGACAACTTCAGTGCAAATGTGGTGATTGATGGAAGCACAGTTAATCTAGGATTATGGGACACTGCTGGACAGGAGGATTACAACAGGCTTAGGCCTTTGAGCTACAGAGGAGCAGATGTGTTTTTGCTGGCATTTTCCCTCCTCAGCAGAGCCAGCTATGAAAATATCTCTAAGAAGGCCCATTTTGTGCAGTGGATCCCTGAACTGAGACATTATGCCCCAATTGTGCCAATTGTACTTGTGGGAACCAAACTTGATTTGAGGGAAGATAGGCAATATTTGATTGATCATCCTGCGGCCACACCTATAACTACTGCTCAGGGAGAAGAGCTGAAGAAGGAAATTGGTGCTGCTGTGTATATAGAATGCAGCTCAAAGACTCAGCAGAATGTGAAGGCTGTGTTTGACGCTGCAATCAAGGTTGTTCTGCAGCCATCAAAGCCAAAGAAAAAACGAAAGAAGAACAGAACATGCGTTTTCCTTTAATTGGTATTCATTTGATTTGCATCATGTAACATTCGTACCCTTCCCCTAAGTTTTCCTTCTGTTTTTTTTTACTTTATTTGATTGCAAGAATCGCCCTTTCTGAACGTATGTATTCCAAACTCTACCCTCTTTCGGTTTTCCAATACTTTTTATTGCTGGTGGATCTAAATGATGTTGTATCTACTGGATAAATACAAGGAAAGAATGTACTCAATTAAAGATAATTTTTGTGATAAGAAAAGTATAATAGCATTAATCATCACTTTTGTGTTGCTCAGCA
>Glyma13g36900.1 sequence type=CDS gene model=Glyma13g36900 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high ATGAGTACAGCAAGATTCATCAAGTGTGTTACTGTGGGAGATGGAGCCGTGGGAAAGACATGTATGCTCATCTCTTACACCAGCAACACATTCCCCACGGACTATGTGCCTACAGTTTTTGACAACTTCAGTGCAAATGTGGTGATTGATGGAAGCACAGTTAATCTAGGATTATGGGACACTGCTGGACAGGAGGATTACAACAGGCTTAGGCCTTTGAGCTACAGAGGAGCAGATGTGTTTTTGCTGGCATTTTCCCTCCTCAGCAGAGCCAGCTATGAAAATATCTCTAAGAAGTGGATCCCTGAACTGAGACATTATGCCCCAATTGTGCCAATTGTACTTGTGGGAACCAAACTTGATTTGAGGGAAGATAGGCAATATTTGATTGATCATCCTGCGGCCACACCTATAACTACTGCTCAGGGAGAAGAGCTGAAGAAGGAAATTGGTGCTGCTGTGTATATAGAATGCAGCTCAAAGACTCAGCAGAATGTGAAGGCTGTGTTTGACGCTGCAATCAAGGTTGTTCTGCAGCCATCAAAGCCAAAGAAAAAACGAAAGAAGAACAGAACATGCGTTTTCCTTTAA >Glyma13g36900.2 sequence type=CDS gene model=Glyma13g36900 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high ATGAGTACAGCAAGATTCATCAAGTGTGTTACTGTGGGAGATGGAGCCGTGGGAAAGACATGTATGCTCATCTCTTACACCAGCAACACATTCCCCACGGACTATGTGCCTACAGTTTTTGACAACTTCAGTGCAAATGTGGTGATTGATGGAAGCACAGTTAATCTAGGATTATGGGACACTGCTGGACAGGAGGATTACAACAGGCTTAGGCCTTTGAGCTACAGAGGAGCAGATGTGTTTTTGCTGGCATTTTCCCTCCTCAGCAGAGCCAGCTATGAAAATATCTCTAAGAAGGCCCATTTTGTGCAGTGGATCCCTGAACTGAGACATTATGCCCCAATTGTGCCAATTGTACTTGTGGGAACCAAACTTGATTTGAGGGAAGATAGGCAATATTTGATTGATCATCCTGCGGCCACACCTATAACTACTGCTCAGGGAGAAGAGCTGAAGAAGGAAATTGGTGCTGCTGTGTATATAGAATGCAGCTCAAAGACTCAGCAGAATGTGAAGGCTGTGTTTGACGCTGCAATCAAGGTTGTTCTGCAGCCATCAAAGCCAAAGAAAAAACGAAAGAAGAACAGAACATGCGTTTTCCTTTAA
>Glyma13g36900.1 sequence type=predicted peptide gene model=Glyma13g36900 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high MSTARFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVIDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLLSRASYENISKKWIPELRHYAPIVPIVLVGTKLDLREDRQYLIDHPAATPITTAQGEELKKEIGAAVYIECSSKTQQNVKAVFDAAIKVVLQPSKPKKKRKKNRTCVFL* >Glyma13g36900.2 sequence type=predicted peptide gene model=Glyma13g36900 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high MSTARFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVIDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLLSRASYENISKKAHFVQWIPELRHYAPIVPIVLVGTKLDLREDRQYLIDHPAATPITTAQGEELKKEIGAAVYIECSSKTQQNVKAVFDAAIKVVLQPSKPKKKRKKNRTCVFL*
Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA | ||