Glyma13g36490 - SoyBase

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Report for Sequence Feature Glyma13g36490

Feature Type:	gene_model
Chromosome:	Gm13
Start:	37762303
stop:	37763688
Source:	JGI
Version:	Wm82.a1.v1.1
High confidence:	yes

A newer version of this gene model can be found here:

Annotations for Glyma13g36490

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT5G54010	AT	Annotation by Michelle Graham. TAIR10: UDP-Glycosyltransferase superfamily protein \| chr5:21919819-21921180 REVERSE LENGTH=453	SoyBase	E_val: 2.33E-156	ISS
GO:0008152	GO-bp	Annotation by Michelle Graham. GO Biological Process: metabolic process	SoyBase	N/A	ISS
GO:0009507	GO-cc	Annotation by Michelle Graham. GO Cellular Compartment: chloroplast	SoyBase	N/A	ISS
GO:0016757	GO-mf	Annotation by Michelle Graham. GO Molecular Function: transferase activity, transferring glycosyl groups	SoyBase	N/A	ISS
GO:0016758	GO-mf	Annotation by Michelle Graham. GO Molecular Function: transferase activity, transferring hexosyl groups	SoyBase	N/A	ISS
KOG1192	KOG	UDP-glucuronosyl and UDP-glucosyl transferase	JGI		ISS
PTHR11926	Panther	GLUCOSYL/GLUCURONOSYL TRANSFERASES	JGI		ISS
PTHR11926:SF77	Panther	GLYCOSYLTRANSFERASE FAMILY PROTEIN	JGI		ISS
PF00201	PFAM	UDP-glucoronosyl and UDP-glucosyl transferase	JGI		ISS
UniRef100_E9M5F1	UniRef	Annotation by Michelle Graham. Most informative UniRef hit: Glycosyltransferase GT10J15 n=1 Tax=Pueraria montana var. lobata RepID=E9M5F1_PUEML	SoyBase	E_val: 0	ISS
UniRef100_I1M3J8	UniRef	Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=2 Tax=Glycine max RepID=I1M3J8_SOYBN	SoyBase	E_val: 0	ISS

Expression Patterns of Glyma13g36490

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology


Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma13g36490 Gene Call Version Wm82.a1.v1.1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma.13g289000	Wm82.a2.v1	IGC	As supplied by JGI

References for Glyma13g36490

Schmutz et al. 2010
Genome sequence of the palaeopolyploid soybean
Nature 2010, 463:178-183

Coding sequences of Glyma13g36490

Limit To All Plant Sequences

>Glyma13g36490.1   sequence type=CDS   gene model=Glyma13g36490   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGAGAACGCACCTCCTAATCCTATGCACATAGCAATGTATCCATGGTTTGCCATGGGACACTTTATCCCATTTCTTCACCTCTCCAACAAGTTAGCAAAGAGAGGTCACAAAATCTCCTTCATAGTCCCCAAAAGAACACAAACCAAGATACAACATCTCAACCAACACCCACACCTCATCACCCTTGTCCCCATCACAGTTCCTCACGTTGATGGCCTTCCTCATGATGCAGAAACCACTTCAGACGTGCTCTTCTCTTTCTTCCCTCTTCTTGCCACCGCTATGGATCGCATAGAGAAGGACATCGAGCTTCTACTGAGGGAACTGAAGCCGCAAATTGTTTTCTTTGATTTCTCTTTCTGGCTTCCAAACCTGGCTCGGAGCCTAGGAATCAAAAGCGTCCAATACTTCATAGTTAATGCAGTTTCAGTGGCTTACTTCGGTTCCCCGGAAAGATATCACAATGGAAGAGACCTGAGTGAAACTGATTTCACGAAACCCTCTCCGGGGTTCCCTGATTCTTCGATCACGCTTCACGAACACGAAGCTCAATTCGTCGTTCGCATGGGGAAGGTGGAGTTCGGCAGTGGTGTTTTGATGTACGACCGTTTCGACATCGGTACTAGGTTGTCGGATGCAATTGGGTTCAAAGGTTGCAGAGAAATAGAAGGGCCTTATGTAGATTATCTTGAAACACAACATGGGAAGCCTGTTTTACTTTCAGGGCCTCTTTTACCTGAGCCACCAAACACTACTTTAGAGGGAAAATGGGTCAAATGGCTTGAGGAATTCAACCCTGGTTCTGTTATTTTCTGTGCATATGGGAGTGAAACCACTTTACAGCAAAATCAATTTCTAGAGTTGTTGCTTGGTCTTGAACTAACAGGCTTTCCCTTTCTTGCAGCACTTAAGCCTCCTAATGGTTTTGAGTCTATTGAAGAAGCACTTCCAGAAGGGTTCAGAGAAAGGGTTCAAGGAAGAGGGGTTGTGTATGAAGGTTGGGTGCAGCAACAATTGATTTTAGGGCATCCTTCTGTTGGGTGTTTCATAACACACTGCGGGGCTGGTTCTATAACTGAGGCACTTGTGAGTGAGTGTCAGTTGGTGTTTTTACCTCGCCTAGGTTCTGATTATGTCATCACTGCACGAATGATGAGTAGGGAGCTGAAGGTTGGGGTGGAAGTGGAGAAAAGTGAAGAAGATGATGGGTCGTTCACAAAAGAAAGTGTATGTAAAGCTGTGAAAATTGTGATGGATGATGAGAATGAGCTTGGGAGACAGGTGAGAGAAAATCACAGAAAAGTGAGAAACATATTGCTAAGCAACAATTTAGAGTCCTTCCATGTTGATATTTTGTGTGACAAGCTTCGTGCTTTACTCTAA

Predicted protein sequences of Glyma13g36490

Limit To All Plant Sequences

>Glyma13g36490.1   sequence type=predicted peptide   gene model=Glyma13g36490   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MENAPPNPMHIAMYPWFAMGHFIPFLHLSNKLAKRGHKISFIVPKRTQTKIQHLNQHPHLITLVPITVPHVDGLPHDAETTSDVLFSFFPLLATAMDRIEKDIELLLRELKPQIVFFDFSFWLPNLARSLGIKSVQYFIVNAVSVAYFGSPERYHNGRDLSETDFTKPSPGFPDSSITLHEHEAQFVVRMGKVEFGSGVLMYDRFDIGTRLSDAIGFKGCREIEGPYVDYLETQHGKPVLLSGPLLPEPPNTTLEGKWVKWLEEFNPGSVIFCAYGSETTLQQNQFLELLLGLELTGFPFLAALKPPNGFESIEEALPEGFRERVQGRGVVYEGWVQQQLILGHPSVGCFITHCGAGSITEALVSECQLVFLPRLGSDYVITARMMSRELKVGVEVEKSEEDDGSFTKESVCKAVKIVMDDENELGRQVRENHRKVRNILLSNNLESFHVDILCDKLRALL*

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