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Report for Sequence Feature Glyma13g34910

Feature Type:gene_model
Chromosome:Gm13
Start:36401634
stop:36405195
Source:JGI
Version:Wm82.a1.v1.1
High confidence:yes



A newer version of this gene model can be found here:

Annotations for Glyma13g34910
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G53940AT Annotation by Michelle Graham. TAIR10: Yippee family putative zinc-binding protein | chr5:21897164-21898589 REVERSE LENGTH=129 SoyBaseE_val: 3.00E-77ISS
GO:0008150GO-bp Annotation by Michelle Graham. GO Biological Process: biological process SoyBaseN/AISS
GO:0005634GO-cc Annotation by Michelle Graham. GO Cellular Compartment: nucleus SoyBaseN/AISS
KOG3399 KOG Predicted Yippee-type zinc-binding protein JGI ISS
PTHR13847Panther FAD NAD BINDING OXIDOREDUCTASES JGI ISS
PTHR13847:SF40Panther SUBFAMILY NOT NAMED JGI ISS
PF03226PFAM Yippee putative zinc-binding protein JGI ISS
UniRef100_D7MTM3UniRef Annotation by Michelle Graham. Most informative UniRef hit: Yippee family protein n=1 Tax=Arabidopsis lyrata subsp. lyrata RepID=D7MTM3_ARALL SoyBaseE_val: 1.00E-73ISS
UniRef100_I1M353UniRef Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1M353_SOYBN SoyBaseE_val: 3.00E-91ISS

Expression Patterns of Glyma13g34910
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma13g34910 not represented in the dataset
Glyma13g34910 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma13g34910 Gene Call Version Wm82.a1.v1.1
Corresponding NameAnnotation VersionEvidenceComments
Glyma.13g274000 Wm82.a2.v1IGC As supplied by JGI

References for Glyma13g34910
Schmutz et al. 2010
  Genome sequence of the palaeopolyploid soybean
  Nature 2010, 463:178-183

Coding sequences of Glyma13g34910
>Glyma13g34910.1   sequence type=CDS   gene model=Glyma13g34910   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGGGAGAATCTTTGTGGTGGAGCTTGAGGGCAGGTCTTATAGATGCAAGTTCTGCAGAACTCACTTGGCCCTTGCAGATGATCTCATCTCCAGGGCCTTTCATTGCCGGAGGGGGAAAGCATACCTATTCAATAATGCCGTGAACTTCACAATTGGAACACCAGAAGAAAGGATGATGCTTTCAGGATTACATACTGTCGCAGATATTTTTTGCTGTTGCTGCGGTCAAATAATTGGCTGGAAATATGAATCTGCACACGAGAAGAGCCAAAAGTATAAAGAAGGGAAGTTTGTTCTTGAAAGAGGAAGGATTGTTGATGAAGTTGATTTCTCCACTGAGTTCTACATCGATAGTCATGCCAGCATGAGTGATGCTGAAGAACCTTAA
Predicted protein sequences of Glyma13g34910
>Glyma13g34910.1   sequence type=predicted peptide   gene model=Glyma13g34910   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MGRIFVVELEGRSYRCKFCRTHLALADDLISRAFHCRRGKAYLFNNAVNFTIGTPEERMMLSGLHTVADIFCCCCGQIIGWKYESAHEKSQKYKEGKFVLERGRIVDEVDFSTEFYIDSHASMSDAEEP*






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