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Report for Sequence Feature Glyma13g34880

Feature Type:gene_model
Chromosome:Gm13
Start:36390509
stop:36391363
Source:JGI
Version:Wm82.a1.v1.1
High confidence:yes



A newer version of this gene model can be found here:

Annotations for Glyma13g34880
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT2G20562AT Annotation by Michelle Graham. TAIR10: unknown protein; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G31090.1); Has 70 Blast hits to 70 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 70; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr2:8850367-8850835 REVERSE LENGTH=73 SoyBaseE_val: 2.00E-27ISS
UniRef100_I1M347UniRef Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1M347_SOYBN SoyBaseE_val: 8.00E-44ISS

Expression Patterns of Glyma13g34880
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma13g34880 not represented in the dataset
Glyma13g34880 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma13g34880 Gene Call Version Wm82.a1.v1.1
Corresponding NameAnnotation VersionEvidenceComments
Glyma.13g273700 Wm82.a2.v1IGC As supplied by JGI

References for Glyma13g34880
Schmutz et al. 2010
  Genome sequence of the palaeopolyploid soybean
  Nature 2010, 463:178-183

Coding sequences of Glyma13g34880
>Glyma13g34880.1   sequence type=CDS   gene model=Glyma13g34880   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGGAGAAAGTAAGTGTAGGCCACTTGGATTCTTGATAGGGCTACCCTTTGCTGTTCTTTCCTTGGTGTTATCTGTGGTAGGTGCTGTTATTTGGATCATTGGGTCTATGTTGAGCTGCTTGTGCCCTTGTTGCATCTGTTTCTCAGGGCTTGCCAATTGCGCCGTTGGCCTTGTGAAACTTCCAGTGAAAGTCATTCGGTGGTTTACTCATCAGATACCTTGCTGA
Predicted protein sequences of Glyma13g34880
>Glyma13g34880.1   sequence type=predicted peptide   gene model=Glyma13g34880   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MGESKCRPLGFLIGLPFAVLSLVLSVVGAVIWIIGSMLSCLCPCCICFSGLANCAVGLVKLPVKVIRWFTHQIPC*






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