Report for Sequence Feature Glyma13g33560
Feature Type: gene_model
Chromosome: Gm13
Start: 35352463
stop: 35369181
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma13g33560
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT3G14570 AT
Annotation by Michelle Graham. TAIR10: glucan synthase-like 4 | chr3:4892643-4902628 FORWARD LENGTH=1976
SoyBase E_val: 0 ISS
GO:0006075 GO-bp
Annotation by Michelle Graham. GO Biological Process: (1->3)-beta-D-glucan biosynthetic process
SoyBase N/A ISS
GO:0009556 GO-bp
Annotation by Michelle Graham. GO Biological Process: microsporogenesis
SoyBase N/A ISS
GO:0052543 GO-bp
Annotation by Michelle Graham. GO Biological Process: callose deposition in cell wall
SoyBase N/A ISS
GO:0000148 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: 1,3-beta-D-glucan synthase complex
SoyBase N/A ISS
GO:0005886 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: plasma membrane
SoyBase N/A ISS
GO:0016020 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: membrane
SoyBase N/A ISS
GO:0003843 GO-mf
Annotation by Michelle Graham. GO Molecular Function: 1,3-beta-D-glucan synthase activity
SoyBase N/A ISS
GO:0016757 GO-mf
Annotation by Michelle Graham. GO Molecular Function: transferase activity, transferring glycosyl groups
SoyBase N/A ISS
KOG0916
KOG
1,3-beta-glucan synthase/callose synthase catalytic subunit
JGI ISS
PTHR12741 Panther
UNCHARACTERIZED DUF605
JGI ISS
PTHR12741:SF4 Panther
gb def: Hypothetical protein F10M23.90 (AT4g26750/F10M23 90) (Hypothetical protein AT4g2
JGI ISS
PF02364 PFAM
1,3-beta-glucan synthase component
JGI ISS
UniRef100_B9SVW5 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: Transferase, transferring glycosyl groups, putative n=1 Tax=Ricinus communis RepID=B9SVW5_RICCO
SoyBase E_val: 0 ISS
UniRef100_UPI000233B7C9 UniRef
Annotation by Michelle Graham. Best UniRef hit: UPI000233B7C9 related cluster n=1 Tax=unknown RepID=UPI000233B7C9
SoyBase E_val: 0 ISS
Expression Patterns of Glyma13g33560
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE
Paralogs of Glyma13g33560
Paralog Evidence Comments
Glyma15g39420 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.3.
Gene model name correspondences to Glyma13g33560 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.13g261000 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma13g33560
Coding sequences of Glyma13g33560
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma13g33560.1 sequence type=CDS gene model=Glyma13g33560 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGTCAGAGATTGTGCCTGCAGAACCCATTGGTGGCATCTATTTCGAGCGAGGAGAGACATCAACAGCATCAGCATCAGCATCAGAGACACCCCATGTCACGTTGGCCATTACCAATGGAAGCAACAACGTTGAATATGTTCCAGAACCGTTTGACAGTGAAAGGTTGCCAACAGTTTTTGCTTCTGAAATCCAAAGGTTCCTTCGAGTGGCCAACTTGCTTGGAAAGGAAGAGCCTCGTGTTGCTTATCTTTGCCGTGTTCATGCCTTTGTGATTGCACACAACTTGGACAAAAATTCTAGTGGAAGGGGTGTTAGACAATTCAAAACTTCACTACTTCATCGACTTGAACAGGATGAGCATGTTACGAAAAAGAAGGGAACAAGTGACATTCGTGAACTTAAAAATGTTTACCGTGCTTACAGGGACTATTATATCAGACATGAGAAAGCATTTGATCTAGAACAAAGTCGAAGGGAGAGATTGATAAATGCCCGAGATATTGCTACTGTTATGTTTGAGGTGCTAAAGACAGTTACAGATCCAGCTAGTTCCCAGGCGCTTATCCAAGGAAATGCAATCCATAAAAAAACTGAATTTAGCATCCTTCCACTTGAGCAAGGATGCATTCAGCATGCGATTATGCAGAAGTCTGAGATTAAGGCTGCCATTGCAGTTATTCGCAATGTTCGTGGTTTACCCCCAGTGCAAGATTTCAAGAAGGACGGAGCCTTTGTGGATCTATTTGATTTTCTTCAGCATTGTTTTGGATTCCAGGAAGCCAATGTGGCCAACCAAAGGGAACATCTTATTCTACTCTTAGCCAATATGCAGACTCGTCAAACTCACAACCAGACATCTGTTTTGAAGTTAGGGGAAGGAGGTGTAGATGAATTGATGAGAAAGTTTTTCAAAAACTATACAAACTGGTGCAGTTTTTGGGAAAGGAAAAGCAATATTCGTTTACCTTTAGTGAAGCAGGAAGCCCAACAATATAAAATTTTATACATTGGGCTTTACCTTCTCATATGGGGGGAGACAGCTAATTTGCGGTTCATGCCAGAATGTCTCTGCTATATTTTTCATCATATGGCATATGAATTGCATGGAATTTTAAGTGGTGCTATCAGCTTAACAACATGGGAAAAGGTCATGCCGGCATATGGAGGAGAAACAGAGTCTTTCCTTAACAATGTTGTCACCCCAATATACACCGTTATAAGACAGGAAGTTGCCAATAGCAAAGGAGGGGCGGCTGATTATTCTGTATGGAGAAACTATGATGATCTTAATGAGTATTTCTGGTCCCCTGATTGTTTCAAAATTGGTTGGCCCATGCGTCTGGACCATGACTTTTTCTTTGTAAAGCCTAGAAATAAACCAGAACCAGATGTCAAGAATGCTCTTGTTGTGTCACCTGGTAAAACAAAAGAGAAGAAAAAGAGAGAAAAGAGGGATGAAGAAGAACCAGAGGATACAAGGGAGGAAATCCATGAACAACAATGGCTAGGAAAGACAAATTTTGTAGAGATCCGTTCATTCTGGCAAATTTTTAGATGCTTTGATAGAATGTGGAGCTTTTTTATTCTATCCCTTCAGGCCATAATAATCATTGCTTGTCATGACTTGGGATCTCCACTGCAGTTATTAGATGCTGTAGTATTTGAGGACATAATTACCATCTTCATTACCTCTGCATATCTTAAACTTATTCAAGCAATTTTAGACGTTGCTTTTATGTGGAAAGCAAGATATACCATGGAATCTTCTCAAAAGGTGAAACTTGTGGTGAAGCTGGTCTTAGCTACTATATGGACTATTGTTCTTCCTGTATGCTATGCTAATTCAAGAAGAAAATATACTTGCTATTCCACAAAGTATGGAAGCTTGGTTGAGGAATGGTGCTTTACTTCCTATATGGTTGCAGCAGCAATATATCTGACAACTAATGCAGTTGAAGTTTTGTTATTTTTTGTCCCTGCTGTTGCTAAGTATATTGAGGTCTCTAATTACAAGATATGCAAAGTTTTGTCTTGGTGGACTCAGCCTAGAATCTATGTTGGTCGGGGGATGCAAGAAGACCAGGTTTCAGTTTTTAAGTACACATTGTTTTGGATATTGGTGTTATCATGTAAATTTGTGTTTAGCTACAGTTTTGAGATAAAACCACTCATAGCACCTACCAGACAGATTATGAAAATTGGTGTAAAGAAGTATGAATGGCATGAGCTTTTTCCAAAAGTCAAAAGTAATGCAGGTGCAATTGTGGCTGTATGGAGCCCTGTAGTAATTGTATATTTTATGGACACACAAATTTGGTATTCTGTTTTCTGTACAATAATTGGTGGACTTTATGGTGTTTTGCATCACCTTGGTGAGATAAGGACACTTGGAATGCTGAGAAGTAAATTTGATTCCTTACCTTCAGCATTTAATGTCTGTCTTATCCCACCATCTTCCAAACGTGGTAAAAAGAAAAGAAAAGGTCTCCTCAGCAATATATTTCAAAAGTTGCCGGATGAAAAAAATGCCACTGCCAAATTTGTTGTGGTATGGAATCAAATTGTAAATCATCTTCGTCTTGAAGACTTAATTAGTAACAGAGAGATGGATTTGATGATGATGCCTGTGTCTTCAGAATTGTTTTCTGCTAAGGTTCGTTGGCCTGTTTTCCTATTAGCAAATAAGTTTTCTACAGCTTTGACCATTGCTAAAGATTTTGAGGGAAAGGAAGAGATTCTTGTCAAGAAAATTACAAAAGACAAATACATGTTTTATGCCGTAAGAGAGTGTTACCAGTCACTGAAATACGTGCTTGAAATTCTTGTTGTGGGTAGCATTGAGAAAAGGATCATATGTGATATACTAAGCAAAATTGAAAAGCATATCCAAGAAACAAGTCTTCTAAAGAACTTTAACTTGAAAGTTCTCCCAGCTCTACATGCTAAAGTTGTTGAGCTAGCTGAACTTCTGATGGAGGGAGATAAAGACCATCAGCACAAAGTTGTGAAGGCCTTGCTAGATGTGTTTGAACTTGTAACAAATGAGATGATGTTTGATTCCAGAATATTGGATATGTTCCACTTTCCCGAACAAAATGAGTGTGGCTTTGTCTATTTTAGAAATGATGATCAACTATTTGACAGTGTGGAAATGAATAGAGATTTCTATCCATTTGCCAAAGAGAATTCCATCCATTTTCCATTGCCAGAAAGTGGTCCTCTGATGGAAAAGATCAAGCGTTTCCATTTGTTGCTTACAGTAAAAGATACAGCGATGGATGTGCCTTCAAACTTAGATGCCCGTAGGCGCATATCATTCTTTGCTACTTCTCTGTTTACAGATATGCCTGATGCTCCAAAAGTGCACAATATGATGCCATTCTGTGTTATAACTCCACATTACATCGAGGACATTAATTTTTCGCTTAAGGAGCTTGGTTCAGATAAAGAGGAGGACTCCATCATCTTCTACATGCAAAAGATATATCCAGATGAATGGACAAATTTTTTGGAACGTATGGGTTGTGATAACCGTAAGAGTTTAGAAGATGAACACAAAACAGAAGATCTTAGACTGTGGGCTTCATTTCGGGGTCAGACACTAAGCAGAACAGTTAGAGGGATGATGTACTACAGAGAAGCCTTAAAATTACAAGCATTCCTTGACATGGCTGAAGAAGAAGATATTCTTGAGGGCTATGAGACTGCTGAAAGAGGTAACCGGGCATTGTTTGCTCGTCTAGAAGCACTAGCAGACATGAAATACACCTATGTCATTTCCTGTCAATCATTTGCATCACAAAAGGCTTCAAATGATCCTCGTTATCAAGATATGATCGACTTGATGATAAGGTATCCATCTCTTCGTGTTGCTTATGTTGAGGAAAAAGAGGAGATAGTGCAGGGTAAACCTCACAAAGTATATTCATCTAAACTGGTTAAAGTTGTCAATGGTTATGAACAGACAATATATCAAATAAAACTACCAGGCCCACCACATCTTGGAGAAGGGAAGCCTGAAAACCAAAACAATGCAATAATATTCACTCGTGGTGAAGCACTCCAAACAATTGATATGAACCAAGATAATTACTTGGAAGAAGCTCTTAAAATGAGAAACCTTCTCCAAGAATTTCTTCGGCGCCAAGGAAGGCGTCCTCCTACAATACTTGGTTTAAGGGAACACATTTTCACAGGAAGTGTGTCTTCTCTGGCTGGGTTCATGTCATATCAAGAGACCAGCTTTGTAACTATTGGTCAAAGGGTTCTGGCTAATCCTCTCAGGGTGCGGTTCCACTATGGCCATCCAGATGTATTTGATAGGGTTTTTCATATCACGAGAGGAGGAATAAGCAAAGCATCTAAAACAATTAACTTGAGTGAGGATGTTTTTGCTGGATTTAATTCAACTTTAAGACGGGGATGTATTTCCTACCATGAATACTTGCAAATTGGCAAAGGTCGTGATGTAGCTCTAAACCAGATCTCAAAATTTGAAGCCAAGGTAGCAAATGGAAACTGTGAGCAAACTATAAGCCGTGACATGTTTCGCCTTGGGCGGCAATTTGATTTTTTCCGGATGCTATCATGCTATTTCACTACAGTTGGATTTTACTTCAGCAGCTTGATTTCAGTGATAGGAATCTATGTATTTCTCTACGGGCAGTTATACCTGGTTCTTAGTGGATTGGAAAGAGCACTTATCATTGAGGCTCGAATCAAGAATGTACAGTCCTTAGAAACGGCTCTTGCCTCCCAGTCATTCATACAACTTGGACTTCTGACAGGCTTACCCATGGTGATGGAAATAGGACTTGAAAGAGGTTTCCTCACAGCCCTAAAGGACTTTGTCCTTATGCAATTGCAATTGGCTGCTGTTTTCTTCACTTTCGCCCTAGGAACGAAAACACATTACTATGGCCGAACGCTTTTGCACGGGGGTGCAAAGTACAGACCGACAGGGCGCAAAGTTGTATTCCATGCTAGCTTCACTGAGAATTACAGATTGTATTCAAGAAGCCACTTTGTTAAGGCATTTGAGCTATTGCTGCTGTTGATTGTTTATAACATGTTCAGGAGGTCCTATCAAAGTAGCATGGCATACGTGTTGATAACATATGCCATTTGGTTCATGTCATTGACTTGGTTGTGTGCACCTTTTCTTTTTAACCCTGCTGGGTTCAGTTGGACCAAGACAGTAGATGATTGGAAAGAGTGGAATAAATGGATCAGACAACAGGGTGGTATAGGAATTCAACAAGATAGAAGTTGGCATTCTTGGTGGCACGATGAGCAAGCTCATCTTCGCTGGTCAGGTTTTGGCTCTAGGTTGACTGAAGTATTGCTTTCTCTTCGTTTTTTCATCTATCAGTATGGTTTGGTCTATCACCTAGACATCTCTCAGCATAGCAAAAATTTTCTTGTTTATGTCCTTTCTTGGATTGTGATTGTTGCAATTTTCCTCTTGGTGAAGGCTGTTAACATGGGAAGGCAACTACTCAGTGCTAATTATCAGCTTGGATTCAGACTTTTCAAAGCATTCTTGTTCCTGGCTGTTCTTGCCATCATCTTTACTCTTTCTGTTATATGCGAGTTGTCGTTGACGGACATTTTCGTTTGCTGTCTAGCATTCATGCCAACCGCGTGGGGATTGATAATGATTGCACAAGCTGCAAGGCCAAAAATAGAGCACACAGGGTTGTGGGACTTCACACGTGCACTTGCTAGAGAATTTGATTATGGAATGGGGATAGTTCTTTTTGGACCTATTGCTATTTTGGCGTGGTTGCCAATCATTAAAGCCTTCCATGCTCGTTTTCTTTTCAATGAGGCATTCAAAAGGCACTTGCAAATCCAACCAATTCTATCAGGAAAAAAGAAGAAGCACAGAACTTGA
Predicted protein sequences of Glyma13g33560
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma13g33560.1 sequence type=predicted peptide gene model=Glyma13g33560 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MSEIVPAEPIGGIYFERGETSTASASASETPHVTLAITNGSNNVEYVPEPFDSERLPTVFASEIQRFLRVANLLGKEEPRVAYLCRVHAFVIAHNLDKNSSGRGVRQFKTSLLHRLEQDEHVTKKKGTSDIRELKNVYRAYRDYYIRHEKAFDLEQSRRERLINARDIATVMFEVLKTVTDPASSQALIQGNAIHKKTEFSILPLEQGCIQHAIMQKSEIKAAIAVIRNVRGLPPVQDFKKDGAFVDLFDFLQHCFGFQEANVANQREHLILLLANMQTRQTHNQTSVLKLGEGGVDELMRKFFKNYTNWCSFWERKSNIRLPLVKQEAQQYKILYIGLYLLIWGETANLRFMPECLCYIFHHMAYELHGILSGAISLTTWEKVMPAYGGETESFLNNVVTPIYTVIRQEVANSKGGAADYSVWRNYDDLNEYFWSPDCFKIGWPMRLDHDFFFVKPRNKPEPDVKNALVVSPGKTKEKKKREKRDEEEPEDTREEIHEQQWLGKTNFVEIRSFWQIFRCFDRMWSFFILSLQAIIIIACHDLGSPLQLLDAVVFEDIITIFITSAYLKLIQAILDVAFMWKARYTMESSQKVKLVVKLVLATIWTIVLPVCYANSRRKYTCYSTKYGSLVEEWCFTSYMVAAAIYLTTNAVEVLLFFVPAVAKYIEVSNYKICKVLSWWTQPRIYVGRGMQEDQVSVFKYTLFWILVLSCKFVFSYSFEIKPLIAPTRQIMKIGVKKYEWHELFPKVKSNAGAIVAVWSPVVIVYFMDTQIWYSVFCTIIGGLYGVLHHLGEIRTLGMLRSKFDSLPSAFNVCLIPPSSKRGKKKRKGLLSNIFQKLPDEKNATAKFVVVWNQIVNHLRLEDLISNREMDLMMMPVSSELFSAKVRWPVFLLANKFSTALTIAKDFEGKEEILVKKITKDKYMFYAVRECYQSLKYVLEILVVGSIEKRIICDILSKIEKHIQETSLLKNFNLKVLPALHAKVVELAELLMEGDKDHQHKVVKALLDVFELVTNEMMFDSRILDMFHFPEQNECGFVYFRNDDQLFDSVEMNRDFYPFAKENSIHFPLPESGPLMEKIKRFHLLLTVKDTAMDVPSNLDARRRISFFATSLFTDMPDAPKVHNMMPFCVITPHYIEDINFSLKELGSDKEEDSIIFYMQKIYPDEWTNFLERMGCDNRKSLEDEHKTEDLRLWASFRGQTLSRTVRGMMYYREALKLQAFLDMAEEEDILEGYETAERGNRALFARLEALADMKYTYVISCQSFASQKASNDPRYQDMIDLMIRYPSLRVAYVEEKEEIVQGKPHKVYSSKLVKVVNGYEQTIYQIKLPGPPHLGEGKPENQNNAIIFTRGEALQTIDMNQDNYLEEALKMRNLLQEFLRRQGRRPPTILGLREHIFTGSVSSLAGFMSYQETSFVTIGQRVLANPLRVRFHYGHPDVFDRVFHITRGGISKASKTINLSEDVFAGFNSTLRRGCISYHEYLQIGKGRDVALNQISKFEAKVANGNCEQTISRDMFRLGRQFDFFRMLSCYFTTVGFYFSSLISVIGIYVFLYGQLYLVLSGLERALIIEARIKNVQSLETALASQSFIQLGLLTGLPMVMEIGLERGFLTALKDFVLMQLQLAAVFFTFALGTKTHYYGRTLLHGGAKYRPTGRKVVFHASFTENYRLYSRSHFVKAFELLLLLIVYNMFRRSYQSSMAYVLITYAIWFMSLTWLCAPFLFNPAGFSWTKTVDDWKEWNKWIRQQGGIGIQQDRSWHSWWHDEQAHLRWSGFGSRLTEVLLSLRFFIYQYGLVYHLDISQHSKNFLVYVLSWIVIVAIFLLVKAVNMGRQLLSANYQLGFRLFKAFLFLAVLAIIFTLSVICELSLTDIFVCCLAFMPTAWGLIMIAQAARPKIEHTGLWDFTRALAREFDYGMGIVLFGPIAILAWLPIIKAFHARFLFNEAFKRHLQIQPILSGKKKKHRT*