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Report for Sequence Feature Glyma13g32551

Feature Type:gene_model
Chromosome:Gm13
Start:34685598
stop:34685837
Source:JGI
Version:Wm82.a1.v1.1
High confidence:yes



A newer version of this gene model can be found here:

Annotations for Glyma13g32551
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT4G33720AT Annotation by Michelle Graham. TAIR10: CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein | chr4:16182813-16183304 FORWARD LENGTH=163 SoyBaseE_val: 6.00E-17ISS
GO:0008150GO-bp Annotation by Michelle Graham. GO Biological Process: biological process SoyBaseN/AISS
GO:0005576GO-cc Annotation by Michelle Graham. GO Cellular Compartment: extracellular region SoyBaseN/AISS
GO:0003674GO-mf Annotation by Michelle Graham. GO Molecular Function: molecular function SoyBaseN/AISS
PF00188PFAM Cysteine-rich secretory protein family JGI ISS
UniRef100_I1ME53UniRef Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1ME53_SOYBN SoyBaseE_val: 2.00E-36ISS
UniRef100_Q9XFB4UniRef Annotation by Michelle Graham. Most informative UniRef hit: PR1a n=1 Tax=Glycine max RepID=Q9XFB4_SOYBN SoyBaseE_val: 2.00E-25ISS

Expression Patterns of Glyma13g32551
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma13g32551 not represented in the dataset
Glyma13g32551 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma13g32551 Gene Call Version Wm82.a1.v1.1
Corresponding NameAnnotation VersionEvidenceComments
Glyma.13g252500 Wm82.a2.v1IGC As supplied by JGI

References for Glyma13g32551
Schmutz et al. 2010
  Genome sequence of the palaeopolyploid soybean
  Nature 2010, 463:178-183

Coding sequences of Glyma13g32551
>Glyma13g32551.1   sequence type=CDS   gene model=Glyma13g32551   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGGGTTGTGCAAGGTTTCATTTTCTGTATTGTGTGTGTTGGGGTTGGTGATTGTGAGTCACGTAGCCTATGCTCTAGACTCACCATCAGACTACGTCAATGCACACAACGCTGCAAGATCAGAGGTGGGTGTTCAAAACTTGGCATGGGATGATACTGTTGCTGCTTTTGCACAGAACTATGCTAATCAACGTAAAGGTGATTGCCAACGGGGAGAATCTTGCAATGAGCACGGGTGA
Predicted protein sequences of Glyma13g32551
>Glyma13g32551.1   sequence type=predicted peptide   gene model=Glyma13g32551   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MGLCKVSFSVLCVLGLVIVSHVAYALDSPSDYVNAHNAARSEVGVQNLAWDDTVAAFAQNYANQRKGDCQRGESCNEHG*






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