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Report for Sequence Feature Glyma13g31076
Feature Type: gene_model
Chromosome: Gm13
Start: 33537599
stop: 33544646
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma13g31076
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT1G28320 AT
Annotation by Michelle Graham. TAIR10: protease-related | chr1:9920673-9924347 REVERSE LENGTH=709
SoyBase E_val: 0 ISS
GO:0005777 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: peroxisome
SoyBase N/A ISS
GO:0003824 GO-mf
Annotation by Michelle Graham. GO Molecular Function: catalytic activity
SoyBase N/A ISS
GO:0004175 GO-mf
Annotation by Michelle Graham. GO Molecular Function: endopeptidase activity
SoyBase N/A ISS
PTHR21004 Panther
SERINE PROTEASE-RELATED
JGI ISS
PF00089 PFAM
Trypsin
JGI ISS
UniRef100_G7ISD6 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: Peroxisomal leader peptide-processing protease n=1 Tax=Medicago truncatula RepID=G7ISD6_MEDTR
SoyBase E_val: 0 ISS
UniRef100_UPI000233B36D UniRef
Annotation by Michelle Graham. Best UniRef hit: UPI000233B36D related cluster n=1 Tax=unknown RepID=UPI000233B36D
SoyBase E_val: 0 ISS
Expression Patterns of Glyma13g31076
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE
Paralogs of Glyma13g31076
Paralog Evidence Comments
Glyma15g08281 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.3.
Gene model name correspondences to Glyma13g31076 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.13g237200 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma13g31076
Transcripts of Glyma13g31076
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma13g31076.2 sequence type=transcript gene model=Glyma13g31076 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
GAAAAAATGAAATGAACTTTTATATAAGCTAAAATTAGCTTATGCATAAGCTTATTTGTAGAAGTTCTCTCATATTAGCTTTTCTTAAAAACGGTTTTTAACTTATGCATAAGCTAGTTTTAGCTTATGGAGAAACTTATTTCATTTTTGTTTCTTATTTTCTTCTCTTAGAGGTGTTTATGTAAAAATTTATCTAAGCATGCACTTCGTAATTGGGTAGGCCAGACTTGATTGCCGGTGTTCAGATTGATGTTATGACCGAGGAAACCAATGAAAAATCCAATCGGGGAACTCCTTGTTGGCTTTTGGCACAGCTTTTGTCATTAGTTGATATTCCTGCTTCATCGAATTGTCTCCAGTCACTTATTGAAGCGTCTTTGGGCTTGCCAGAGCATGAATGGGAGGTTGGTTGGTCTTTGGCATCTTACAATAATGATTCTCAACCTTCCAAAGATTTTTTTCAAACTCATCCTCGGGAAAGATTGGCTGCGGGAGGATCTGGCAGTGCAAGTCTTGTGTACAAATCACTTACTCGAATGGCAATTCTTAGTGTTTCTTTATCTTTCAGGGACTTGCTGGATAGTAAAGTATCTGCCATGAATAAAAGAGGTGATTTTCTTCTGGCAGTTGGATCTCCTTTTGGAGTCCTGTCACCTATGCACTTTTTTAACAGCATCTCTGTAGGATGCATTGCAAACTGCTATCCTCCTCATTCATCTGATGGATCGTTGCTGATGGCTGACATACGCTGTCTTCCTGGAATGGAAGGCAGTCCAGTTTTCAGTGAGCATGCATGTCTTATTGGTGTCCTGATCAGACCATTCAGACAGAAGGCGTATGGAGCGGAAATCCAGCTGGTGATTCCATGGGATGCCATTGTGACTGCTTCTAGTGGCTTGCTGCACAAGAGGCCTCAGAACACACAGAAAGGTTTATGTAATCAGGAGGGCAACCTTTATGCTGCAGGAAGTGTACCTTTTTCTGACACTGACAAATTAGATGTTTGCTCTAGGAATAAACACGAGCATTTATATTTTGGTAGCTCGTCACCATTACCAATTGAGAAGGCAATGACTTCTGTCTGTCTTGTTACTATTGGTGATGGAGTATGGGCATCTGGTGTTTTACTAAATAGTCAAGGTCTCATACTTACAAATGCTCATCTGTTGGAACCATGGAGATTCGGGAAAGAACATGTAAATGGAGGAGGATATGGAACTAATTCAGAAAAGATTTCTTCCATGTTGGAGGGAACTGCATATGTTGTTAACAGAGTTGAGAGCAATCAAGTTAGTCAAACTTCACCGTTGAAGATGCCAATTCTTTATCCTTTCGCTGCGAATGAGCAGGGGGGATATAAGTCGAGTCCAACTTATGACAACCATAGAAACATACGTGTACGTCTTGATCATATCAAATCTTGGGTTTGGTGTGATGCAAAAGTAGTGTATGTTTGTAAAGGACCATGGGATGTTGCCTTACTGCAGCTTGAATCTGTTCCAGATGATCTTTTGCCTATAACAATGAATTTTTCTAGGCCATCCACAGGATCACAGGCATTTGTCATTGGCCATGGATTATTTGGCCCAAAGCACGGATTCTTCCCATCTGTTTGCTCTGGTGTGGTAGCAAAAGTGGTTGAGGCAAAGACTCCTCAATCTTATCTGTCCGTTCAGCCAGAACATCTCCACAACCATGAGCACTTCCCAGCAATGCTTGAAACAACAGCTGCTATTCATCCTGGTGCTAGTGGTGGTGCTATTATCAATTCAGATGGTCACATGATTGGCCTGGTTACAAGCAATGCAAGGCATAGTGGAGGAGCAATAATACCTCAACTTAATTTTAGCATTCCATCTGCTGCTTTGGCACCCATCGTCAACTTCTCAAAAGCCATGGAGGATTTATCACTTCTACGGATTCTAGACGAACCGAACGAATACCTTTCATCTGTATGGGCATTGATGCGGCCATCATATCCTAATCCCCATCCTATGCATGATCCACCTCAGTCGGTTACAGACAATAAAAGTAAAGAGAAGGGTTCTCGGTTTGCTAAGTTTATTGCTGAAAGAAAGGACATTTTCAATGCTGGAAAGAGTGGAGTGATTTCTAAGGAAGTTATTGCTAGTAAGTTATGATCTCTGATGAAGTGACAAAGTTTACCTAAATGACCATGGCAAAGCTTTGCCAACATACAACTTGTCAATGACTACACTTCCGTTGATTAAAATCTTTGGACTGAAATCTTCTGCCCTAGATTGTTAGCCAAAGAAAATCAAGGAAATAAATTTTCTAGAATCTCTAAACGATTATACTAGTACTTAATTAAAGTTTAAAACTGATTTTACATAAGACAGTTACTTTTGTTTTGTACTTTGGTTGAGATTAAGTAATTATAGGAGAAACTCTTGATAGAGTTACTTTGTTCAACTTTTGTGTATATATATATATATATATATATATAT
Coding sequences of Glyma13g31076
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma13g31076.1 sequence type=CDS gene model=Glyma13g31076 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGTCCCAAATTCCTCCCAGGTCCCAACCAGGAAAAATGGTTCTGTCGGATGCCGTTAATTTTGCTCGGAATTTCGCAGTTATGGTCAGAGTTCGTGGCCCTGACCCAAAAGGGTTGAAGATGAGAAATCACGCTTTTCATCAATACCGTTCTGGTGAAACAACCCTTTCAGCTTCGGGGGTACTTGTACCTGATACTCTTTGTGATTCTCAAGTAGCTACGCGTCTTAATGGTGATAACTGTGAGGATAGGGTATTGGTTGTAACGGTTGCTTCAGTTGTTGAGCCTTTTCTGTCACCTCAACAGAGAGACAATATTCCTCAGGGTAGGCCAGACTTGATTGCCGGTGTTCAGATTGATGTTATGACCGAGGAAACCAATGAAAAATCCAATCGGGGAACTCCTTGTTGGCTTTTGGCACAGCTTTTGTCATTAGTTGATATTCCTGCTTCATCGAATTGTCTCCAGTCACTTATTGAAGCGTCTTTGGGCTTGCCAGAGCATGAATGGGAGGTTGGTTGGTCTTTGGCATCTTACAATAATGATTCTCAACCTTCCAAAGATTTTTTTCAAACTCATCCTCGGGAAAGATTGGCTGCGGGAGGATCTGGCAGTGCAAGTCTTGTGTACAAATCACTTACTCGAATGGCAATTCTTAGTGTTTCTTTATCTTTCAGGGACTTGCTGGATAGTAAAGTATCTGCCATGAATAAAAGAGGTGATTTTCTTCTGGCAGTTGGATCTCCTTTTGGAGTCCTGTCACCTATGCACTTTTTTAACAGCATCTCTGTAGGATGCATTGCAAACTGCTATCCTCCTCATTCATCTGATGGATCGTTGCTGATGGCTGACATACGCTGTCTTCCTGGAATGGAAGGCAGTCCAGTTTTCAGTGAGCATGCATGTCTTATTGGTGTCCTGATCAGACCATTCAGACAGAAGGCGTATGGAGCGGAAATCCAGCTGGTGATTCCATGGGATGCCATTGTGACTGCTTCTAGTGGCTTGCTGCACAAGAGGCCTCAGAACACACAGAAAGGTTTATGTAATCAGGAGGGCAACCTTTATGCTGCAGGAAGTGTACCTTTTTCTGACACTGACAAATTAGATGTTTGCTCTAGGAATAAACACGAGCATTTATATTTTGGTAGCTCGTCACCATTACCAATTGAGAAGGCAATGACTTCTGTCTGTCTTGTTACTATTGGTGATGGAGTATGGGCATCTGGTGTTTTACTAAATAGTCAAGGTCTCATACTTACAAATGCTCATCTGTTGGAACCATGGAGATTCGGGAAAGAACATGTAAATGGAGGAGGATATGGAACTAATTCAGAAAAGATTTCTTCCATGTTGGAGGGAACTGCATATGTTGTTAACAGAGTTGAGAGCAATCAAGTTAGTCAAACTTCACCGTTGAAGATGCCAATTCTTTATCCTTTCGCTGCGAATGAGCAGGGGGGATATAAGTCGAGTCCAACTTATGACAACCATAGAAACATACGTGTACGTCTTGATCATATCAAATCTTGGGTTTGGTGTGATGCAAAAGTAGTGTATGTTTGTAAAGGACCATGGGATGTTGCCTTACTGCAGCTTGAATCTGTTCCAGATGATCTTTTGCCTATAACAATGAATTTTTCTAGGCCATCCACAGGATCACAGGCATTTGTCATTGGCCATGGATTATTTGGCCCAAAGCACGGATTCTTCCCATCTGTTTGCTCTGGTGTGGTAGCAAAAGTGGTTGAGGCAAAGACTCCTCAATCTTATCTGTCCGTTCAGCCAGAACATCTCCACAACCATGAGCACTTCCCAGCAATGCTTGAAACAACAGCTGCTATTCATCCTGGTGCTAGTGGTGGTGCTATTATCAATTCAGATGGTCACATGATTGGCCTGGTTACAAGCAATGCAAGGCATAGTGGAGGAGCAATAATACCTCAACTTAATTTTAGCATTCCATCTGCTGCTTTGGCACCCATCGTCAACTTCTCAAAAGCCATGGAGGATTTATCACTTCTACGGATTCTAGACGAACCGAACGAATACCTTTCATCTGTATGGGCATTGATGCGGCCATCATATCCTAATCCCCATCCTATGCATGATCCACCTCAGTCGGTTACAGACAATAAAAGTAAAGAGAAGGGTTCTCGGTTTGCTAAGTTTATTGCTGAAAGAAAGGACATTTTCAATGCTGGAAAGAGTGGAGTGATTTCTAAGGAAGTTATTGCTAGTAAGTTATGA
>Glyma13g31076.2 sequence type=CDS gene model=Glyma13g31076 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGACCGAGGAAACCAATGAAAAATCCAATCGGGGAACTCCTTGTTGGCTTTTGGCACAGCTTTTGTCATTAGTTGATATTCCTGCTTCATCGAATTGTCTCCAGTCACTTATTGAAGCGTCTTTGGGCTTGCCAGAGCATGAATGGGAGGTTGGTTGGTCTTTGGCATCTTACAATAATGATTCTCAACCTTCCAAAGATTTTTTTCAAACTCATCCTCGGGAAAGATTGGCTGCGGGAGGATCTGGCAGTGCAAGTCTTGTGTACAAATCACTTACTCGAATGGCAATTCTTAGTGTTTCTTTATCTTTCAGGGACTTGCTGGATAGTAAAGTATCTGCCATGAATAAAAGAGGTGATTTTCTTCTGGCAGTTGGATCTCCTTTTGGAGTCCTGTCACCTATGCACTTTTTTAACAGCATCTCTGTAGGATGCATTGCAAACTGCTATCCTCCTCATTCATCTGATGGATCGTTGCTGATGGCTGACATACGCTGTCTTCCTGGAATGGAAGGCAGTCCAGTTTTCAGTGAGCATGCATGTCTTATTGGTGTCCTGATCAGACCATTCAGACAGAAGGCGTATGGAGCGGAAATCCAGCTGGTGATTCCATGGGATGCCATTGTGACTGCTTCTAGTGGCTTGCTGCACAAGAGGCCTCAGAACACACAGAAAGGTTTATGTAATCAGGAGGGCAACCTTTATGCTGCAGGAAGTGTACCTTTTTCTGACACTGACAAATTAGATGTTTGCTCTAGGAATAAACACGAGCATTTATATTTTGGTAGCTCGTCACCATTACCAATTGAGAAGGCAATGACTTCTGTCTGTCTTGTTACTATTGGTGATGGAGTATGGGCATCTGGTGTTTTACTAAATAGTCAAGGTCTCATACTTACAAATGCTCATCTGTTGGAACCATGGAGATTCGGGAAAGAACATGTAAATGGAGGAGGATATGGAACTAATTCAGAAAAGATTTCTTCCATGTTGGAGGGAACTGCATATGTTGTTAACAGAGTTGAGAGCAATCAAGTTAGTCAAACTTCACCGTTGAAGATGCCAATTCTTTATCCTTTCGCTGCGAATGAGCAGGGGGGATATAAGTCGAGTCCAACTTATGACAACCATAGAAACATACGTGTACGTCTTGATCATATCAAATCTTGGGTTTGGTGTGATGCAAAAGTAGTGTATGTTTGTAAAGGACCATGGGATGTTGCCTTACTGCAGCTTGAATCTGTTCCAGATGATCTTTTGCCTATAACAATGAATTTTTCTAGGCCATCCACAGGATCACAGGCATTTGTCATTGGCCATGGATTATTTGGCCCAAAGCACGGATTCTTCCCATCTGTTTGCTCTGGTGTGGTAGCAAAAGTGGTTGAGGCAAAGACTCCTCAATCTTATCTGTCCGTTCAGCCAGAACATCTCCACAACCATGAGCACTTCCCAGCAATGCTTGAAACAACAGCTGCTATTCATCCTGGTGCTAGTGGTGGTGCTATTATCAATTCAGATGGTCACATGATTGGCCTGGTTACAAGCAATGCAAGGCATAGTGGAGGAGCAATAATACCTCAACTTAATTTTAGCATTCCATCTGCTGCTTTGGCACCCATCGTCAACTTCTCAAAAGCCATGGAGGATTTATCACTTCTACGGATTCTAGACGAACCGAACGAATACCTTTCATCTGTATGGGCATTGATGCGGCCATCATATCCTAATCCCCATCCTATGCATGATCCACCTCAGTCGGTTACAGACAATAAAAGTAAAGAGAAGGGTTCTCGGTTTGCTAAGTTTATTGCTGAAAGAAAGGACATTTTCAATGCTGGAAAGAGTGGAGTGATTTCTAAGGAAGTTATTGCTAGTAAGTTATGA
Predicted protein sequences of Glyma13g31076
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma13g31076.1 sequence type=predicted peptide gene model=Glyma13g31076 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MSQIPPRSQPGKMVLSDAVNFARNFAVMVRVRGPDPKGLKMRNHAFHQYRSGETTLSASGVLVPDTLCDSQVATRLNGDNCEDRVLVVTVASVVEPFLSPQQRDNIPQGRPDLIAGVQIDVMTEETNEKSNRGTPCWLLAQLLSLVDIPASSNCLQSLIEASLGLPEHEWEVGWSLASYNNDSQPSKDFFQTHPRERLAAGGSGSASLVYKSLTRMAILSVSLSFRDLLDSKVSAMNKRGDFLLAVGSPFGVLSPMHFFNSISVGCIANCYPPHSSDGSLLMADIRCLPGMEGSPVFSEHACLIGVLIRPFRQKAYGAEIQLVIPWDAIVTASSGLLHKRPQNTQKGLCNQEGNLYAAGSVPFSDTDKLDVCSRNKHEHLYFGSSSPLPIEKAMTSVCLVTIGDGVWASGVLLNSQGLILTNAHLLEPWRFGKEHVNGGGYGTNSEKISSMLEGTAYVVNRVESNQVSQTSPLKMPILYPFAANEQGGYKSSPTYDNHRNIRVRLDHIKSWVWCDAKVVYVCKGPWDVALLQLESVPDDLLPITMNFSRPSTGSQAFVIGHGLFGPKHGFFPSVCSGVVAKVVEAKTPQSYLSVQPEHLHNHEHFPAMLETTAAIHPGASGGAIINSDGHMIGLVTSNARHSGGAIIPQLNFSIPSAALAPIVNFSKAMEDLSLLRILDEPNEYLSSVWALMRPSYPNPHPMHDPPQSVTDNKSKEKGSRFAKFIAERKDIFNAGKSGVISKEVIASKL*
>Glyma13g31076.2 sequence type=predicted peptide gene model=Glyma13g31076 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MTEETNEKSNRGTPCWLLAQLLSLVDIPASSNCLQSLIEASLGLPEHEWEVGWSLASYNNDSQPSKDFFQTHPRERLAAGGSGSASLVYKSLTRMAILSVSLSFRDLLDSKVSAMNKRGDFLLAVGSPFGVLSPMHFFNSISVGCIANCYPPHSSDGSLLMADIRCLPGMEGSPVFSEHACLIGVLIRPFRQKAYGAEIQLVIPWDAIVTASSGLLHKRPQNTQKGLCNQEGNLYAAGSVPFSDTDKLDVCSRNKHEHLYFGSSSPLPIEKAMTSVCLVTIGDGVWASGVLLNSQGLILTNAHLLEPWRFGKEHVNGGGYGTNSEKISSMLEGTAYVVNRVESNQVSQTSPLKMPILYPFAANEQGGYKSSPTYDNHRNIRVRLDHIKSWVWCDAKVVYVCKGPWDVALLQLESVPDDLLPITMNFSRPSTGSQAFVIGHGLFGPKHGFFPSVCSGVVAKVVEAKTPQSYLSVQPEHLHNHEHFPAMLETTAAIHPGASGGAIINSDGHMIGLVTSNARHSGGAIIPQLNFSIPSAALAPIVNFSKAMEDLSLLRILDEPNEYLSSVWALMRPSYPNPHPMHDPPQSVTDNKSKEKGSRFAKFIAERKDIFNAGKSGVISKEVIASKL*