SoyBase
SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research
SoyBase
SoyBase transitions to NEW site on 10/1/2024
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A newer version of this gene model can be found here:
| Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
|---|---|---|---|---|---|
| AT1G62620 | AT | Annotation by Michelle Graham. TAIR10: Flavin-binding monooxygenase family protein | chr1:23182678-23184864 FORWARD LENGTH=450 | SoyBase | E_val: 2.00E-160 | ISS |
| GO:0055114 | GO-bp | Annotation by Michelle Graham. GO Biological Process: oxidation-reduction process | SoyBase | N/A | ISS |
| GO:0005634 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: nucleus | SoyBase | N/A | ISS |
| GO:0004497 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: monooxygenase activity | SoyBase | N/A | ISS |
| GO:0004499 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: N,N-dimethylaniline monooxygenase activity | SoyBase | N/A | ISS |
| GO:0050660 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: flavin adenine dinucleotide binding | SoyBase | N/A | ISS |
| GO:0050661 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: NADP binding | SoyBase | N/A | ISS |
| KOG1399 | KOG | Flavin-containing monooxygenase | JGI | ISS | |
| PTHR23023 | Panther | DIMETHYLANILINE MONOOXYGENASE | JGI | ISS | |
| PTHR23023:SF6 | Panther | SUBFAMILY NOT NAMED | JGI | ISS | |
| PF00743 | PFAM | Flavin-binding monooxygenase-like | JGI | ISS | |
| UniRef100_G7LEJ7 | UniRef | Annotation by Michelle Graham. Most informative UniRef hit: Dehydrosqualene desaturase n=1 Tax=Medicago truncatula RepID=G7LEJ7_MEDTR | SoyBase | E_val: 0 | ISS |
| UniRef100_I1M0V5 | UniRef | Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1M0V5_SOYBN | SoyBase | E_val: 0 | ISS |
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Glyma13g27060 not represented in the dataset |
Glyma13g27060 not represented in the dataset |
| Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
| Corresponding Name | Annotation Version | Evidence | Comments |
|---|---|---|---|
| Glyma.13g200400 | Wm82.a2.v1 | IGC | As supplied by JGI |
| Schmutz et al. 2010 Genome sequence of the palaeopolyploid soybean Nature 2010, 463:178-183 |
>Glyma13g27060.1 sequence type=CDS gene model=Glyma13g27060 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high ATGCATCGATCACTGAAAGTCGCGGTGATCGGCGCCGGCGTCTCGGGCCTCGCCGCCGCGCGCGAACTCCGCCACGAGGGCCACAACGTCGTCGTTTTGGAAAAGTCCAATCACGTGGGCGGCATGTGGGCCTACGACCCAAAAACAGATTCCGACCCATTGGGTCTCGACCCGACCCGCGAAACCGTCCACAGTAGCCTCTACCTCTCGCTGCGCACCAACCTCCCGCGCCAGCTCATGGGCTTCTCGGACTTTCCGTTTGTAAAAAACGAATCGGGTGACCCGAGAACGTTCCCGGGTCACGAGGAGGTGCTGCGGTTTCTGGAAGGGTTCGCGGGCGAGTTCGGGATTAACGAGTTGACCCAGTTTGAAACGGAGGTTGTGAGAGTAGAGAGAAAGGGAAACGAGTGGGTGGTTGAGTCAAGAACGAGTCGAGACGGTGACTCAGTGAGTCGGGAGGGGTTCGACGCGGTTGTGGTTTGTTCGGGGCACTTTGTGGAACCCAAACTTGCGGAGGTACCCGGGATTGACACGTGGCGGGGGTTCCAGATGCATTCGCATAACTACAGAGTTCCTCAACCTTTCCATAATCAGGTTGTGATTTTAATTGGTCTTGGACCAAGTGCATTTGACATCTCAAGAGAAATAGCACAAGTAGCAAGGGAAGTTCATGTAGCAACAAGACTAAATCCAGATTTAGCGGGAATGAAGCTCGGAGATTATGGCAAAATAATGTTTCGCACAGCGGTCAAATGTGTATTTGAAGATGGTTTGGTTGCCTTTGAAGATGGATTCTCCGTTTATGCAGATGCCATAATCCACTGTACAGGATACAAGTACCACTTTCCTTTCCTTGAAACCAATGGACTAGTAACCGTTGATGATAATCGCGTTGGGCCACTATACAAACACGTCTTTCCTCCTGCATTGTCTCCATGGCTCTCTTTCATTGGTTTAACCTTCAAGAATTCAGTCTACCAAATAATTGAGTTGCAATGCAAGTGGGTTGCAAAAGTTTTGTCTGGTAAAGTTCTTTTACCTACAGAAAAGGAAATGATGGAATCTGTTAAAGAATACTATCAACTCATGGAGGAAAATGGGTTGCCCAAGCGTTACACTCATTCCCTTTATCCACTTCAGGCTGACTATAAACACTGGCTAGTGGCTGAAATTGGATTGCCTCCGTTGGAAGAATGGAAAGAGAATATGCTTAAACAGTGCTTTAAGAACTTTGTTGAAATGAATGAAAAGTACAGAGATGAATGGGATGATACTTATTGGGATGCCATCATTCATGGTGCTCCGGCTTCAGAAAAATAA
>Glyma13g27060.1 sequence type=predicted peptide gene model=Glyma13g27060 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high MHRSLKVAVIGAGVSGLAAARELRHEGHNVVVLEKSNHVGGMWAYDPKTDSDPLGLDPTRETVHSSLYLSLRTNLPRQLMGFSDFPFVKNESGDPRTFPGHEEVLRFLEGFAGEFGINELTQFETEVVRVERKGNEWVVESRTSRDGDSVSREGFDAVVVCSGHFVEPKLAEVPGIDTWRGFQMHSHNYRVPQPFHNQVVILIGLGPSAFDISREIAQVAREVHVATRLNPDLAGMKLGDYGKIMFRTAVKCVFEDGLVAFEDGFSVYADAIIHCTGYKYHFPFLETNGLVTVDDNRVGPLYKHVFPPALSPWLSFIGLTFKNSVYQIIELQCKWVAKVLSGKVLLPTEKEMMESVKEYYQLMEENGLPKRYTHSLYPLQADYKHWLVAEIGLPPLEEWKENMLKQCFKNFVEMNEKYRDEWDDTYWDAIIHGAPASEK*
| Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA | ||
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